Investigations of 16S rRNA gene sequences hallmark modern microbiology. These sequences provide culture-independent insight into the abundance and distribution of microbiota and serve as a principle resource through which microbial community diversity is measured. Consequently, researchers rely on 16S gene sequences to test hypotheses rooted in ecology, evolution, and disease....
Microbial communities in Arctic coastal lagoons drive biogeochemical cycles at the terrestrial-marine interface and help to determine the fate and form of resources like nitrogen (N) and carbon (C) as they are delivered to the Arctic Ocean. Though rising rates of primary production in the Arctic Ocean are well-characterized, the...
The unique capability of carbon-based ion-selective electrode (ISE) to perform highly sensitive anodic stripping voltammetry, while maintaining all the properties of an ISE, is demonstrated in terms of sensitivity, detection limit, response time and selectivity. Square wave anodic stripping voltammetry involves deposition and dissolution steps of metal ions, which means...
Arctic soils are warming, making vast stores of organic carbon available for conversion to CO₂. This could create a positive feedback loop and accelerate global warming, but the processes that convert this carbon into CO₂ are not well understood. We investigated how the combined activities of sunlight and microbes degrade...
Over 100 monthly bacterioplankton DNA samples, from each of the surface and 200 m depths at the Bermuda Atlantic Time-series Study (BATS) site, were analyzed for community assembly processes. Correlation networks, filtered for potential autocorrelation artifacts, were constructed for each depth. Network characteristics for the two depths were remarkably similar...
The budding yeast Brettanomyces bruxellensis has the potential to spoil fermented beverages and cause financial losses, but also contribute positively to certain products such as Lambic beer. It is most notorious for causing “Brett” spoilage of wine, which is characterized by undesirable aromas such as “bandaid” and “barnyard”, therefore most...
In this research, we address the problem of learning a single causal network structure from multiple dataset generated from different experiments. The experiments can be observational or interventional. We assume that each dataset is generated by an unknown causal network altered under different experimental conditions (interventions, manipulation or perturbation). As...
Longitudinal patterns of fish and benthic invertebrate distribution and
habitat use were similar in Thomas Creek, Oregon but clarity of these patterns
differed. I studied fish and aquatic invertebrates simultaneously, at multiple
scales, and used multivariate statistical techniques to compare responses to the
same environmental conditions. Both types of organisms...
Understanding the impact of humans on the environment has long been a topic of scholarly interest and debate. As environmental problems mount, accounts of historic ecological conditions and the factors of change become increasingly useful. This study considers competing schools of interpretation about human impacts on ecological landscapes and develops...
The Minerals Yearbook and the Census
of Minerals Industries' statistics lack detail,
completeness, and accuracy concerning stone and
sand and gravel in Oregon and are therefore
deficient in their utility. The lack of detail and
completeness causes extreme difficulty in comparing
varied field-checked statistics. The inaccuracy
of the data concerning...