Index Catalog // ScholarsArchive@OSU

Selfish Little Circles: Transmission Bias and Evolution of Large Deletion-Bearing Mitochondrial DNA in Caenorhabditis briggsae Nematodes

Creator:: Clark, Katie A., Howe, Dana K., Gafner, Kristin, Kusuma, Danika, Ping, Sita, Estes, Suzanne, and Denver, Dee R.
Abstract:: Selfish DNA poses a significant challenge to genome stability and organismal fitness in diverse eukaryotic lineages. Although selfish mitochondrial DNA (mtDNA) has known associations with cytoplasmic male sterility in numerous gynodioecious plant species and is manifested as petite mutants in experimental yeast lab populations, examples of selfish mtDNA in animals...
Resource Type:: Article
Full Text:: to study selfish mtDNA dynamics in metazoans. Citation: Clark KA, Howe DK, Gafner K, Kusuma D, Ping

Palaeo-sea-level and palaeo-ice-sheet databases: problems, strategies, and perspectives

Creator:: Düsterhus, André, Rovere, Alessio, Carlson, Anders E., Horton, Benjamin P., Klemann, Volker, Tarasov, Lev, Barlow, Natasha L. M., Bradwell, Tom, Clark, Jorie, Dutton, Andrea, Gehrels, W. Roland, Hibbert, Fiona D., Hijma, Marc P., Khan, Nicole, Kopp, Robert E., Sivan, Dorit, and Törnqvist, Torbjörn E.
Abstract:: Sea-level and ice-sheet databases have driven numerous advances in understanding the Earth system. We describe the challenges and offer best strategies that can be adopted to build self-consistent and standardised databases of geological and geochemical information used to archive palaeo-sea-levels and palaeo-ice-sheets. There are three phases in the development of...
Resource Type:: Article
Full Text:: timing of the Last Glacial Maximum (e.g. Clark et al., 2009) and global deglaciation of valley glaciers

Evolutionary Biology for the 21st Century

Creator:: Losos, Jonathan B., Arnold, Stevan J., Bejerano, Gill, Brodie, E. D. III, Hibbett, David, Hoekstra, Hopi E., Mindell, David P., Monteiro, Antonia, Moritz, Craig, Orr, H. Allen, Petrov, Dmitri A., Renner, Susanne S., Ricklefs, Robert E., Soltis, Pamela S., and Turner, Thomas L.
Abstract:: We live in an exciting time for biology. Technological advances have made data collection easier and cheaper than we could ever have imagined just 10 years ago. We can now synthesize and analyze large data sets containing genomes, transcriptomes, proteomes, and multivariate phenotypes. At the same time, society's need for...
Resource Type:: Article
Full Text:: , Charlottesville, Virginia, United States of America, 5 Department of Biology, Clark University, Worcester

Where to find 1.5 million yr old ice for the IPICS “Oldest-Ice” ice core

Creator:: Fischer, H., Severinghaus, J., Brook, Edward J., Wolff, E., Albert, M., Alemany, O., Arthern, R., Bentley, C., Blankenship, D., Chappellaz, J., Creyts, T., Dahl-Jensen, D., Dinn, M., Frezzotti, M., Fujita, S., Gallee, H., Hindmarsh, R., Hudspeth, D., Jugie, G., Kawamura, K., Lipenkov, V., Miller, H., Mulvaney, R., Parrenin, F., Pattyn, F., Ritz, C., Schwander, J., Steinhage, D., van Ommen, T., and Wilhelms, F.
Abstract:: The recovery of a 1.5 million yr long ice core from Antarctica represents a keystone of our understanding of Quaternary climate, the progression of glaciation over this time period and the role of greenhouse gas cycles in this progression. Here we tackle the question of where such ice may still...
Resource Type:: Article
Full Text:: that po- sitions in the vicinity of major domes and saddle position on the East Antarctic Plateau will

Technical note: Time lag correction of aquatic eddy covariance data measured in the presence of waves

Creator:: Berg, P., Reimers, Clare E., Rosman, J. H., Huettel, M., Delgard, M. L., Reidenbach, M. A., and Özkan-Haller, H. Tuba
Abstract:: Extracting benthic oxygen fluxes from eddy covariance time series measured in the presence of surface gravity waves requires careful consideration of the temporal alignment of the vertical velocity and the oxygen concentration. Using a model based on linear wave theory and measured eddy covariance data, we show that a substantial...
Resource Type:: Article
Full Text:: velocity sensor (e.g., a Vector acoustic Doppler ve- locimeter (ADV) from Nortek AS). Clark-type oxygen mi

Technical note: Time lag correction of aquatic eddy covariance data measured in the presence of waves

Creator:: Berg, P., Reimers, Clare E., Rosman, J. H., Huettel, M., Delgard, M. L., Reidenbach, M. A., and Özkan-Haller, H. Tuba
Abstract:: Extracting benthic oxygen fluxes from eddy covariance time series measured in the presence of surface gravity waves requires careful consideration of the temporal alignment of the vertical velocity and the oxygen concentration. Using a model based on linear wave theory and measured eddy covariance data, we show that a substantial...
Resource Type:: Article
Full Text:: to the velocity sensor (e.g. a Vector Acoustic Doppler Velocimeter (ADV) from Nortek AS). Clark-type

Mapping Migratory Bird Prevalence Using Remote Sensing Data Fusion

Creator:: Swatantran, Anu, Dubayah, Ralph, Goetz, Scott, Hofton, Michelle, Betts, Matthew G., Sun, Mindy, Simard, Marc, and Holmes, Richard
Abstract:: Background: Improved maps of species distributions are important for effective management of wildlife under increasing anthropogenic pressures. Recent advances in lidar and radar remote sensing have shown considerable potential for mapping forest structure and habitat characteristics across landscapes. However, their relative efficacies and integrated use in habitat mapping remain largely...
Resource Type:: Article
Full Text:: appropriate scale (grain) of canopy measurement for habitat analyses is still an open one that will require

WikiPathways for plants: a community pathway curation portal and a case study in rice and arabidopsis seed development networks

Creator:: Hanumappa, Mamatha, Preece, Justin, Elser, Justin, Nemeth, Denise, Bono, Gina, Wu, Kenny, and Jaiswal, Pankaj
Abstract:: Background: Next-generation sequencing and 'omics' platforms are used extensively in plant biology research to unravel new genomes and study their interactions with abiotic and biotic agents in the growth environment. Despite the availability of a large and growing number of genomic data sets, there are only limited resources providing highly-curated...
Resource Type:: Article
Full Text:: manual editing. Building such networks in other plant species will enhance inter-species compari- son and

Physician Care Patterns and Adherence to Postpartum Glucose Testing after Gestational Diabetes Mellitus in Oregon

Creator:: Hunsberger, Monica L., Donatelle, Rebecca J., Lindsay, Karen, and Rosenberg, Kenneth D.
Abstract:: Objective: This study examines obstetrician/gynecologists and family medicine physicians' reported care patterns, attitudes and beliefs and predictors of adherence to postpartum testing in women with a history of gestational diabetes mellitus. Research Design and Methods: In November-December 2005, a mailed survey went to a random, cross-sectional sample of 683 Oregon...
Resource Type:: Article
Full Text:: response 11 (6.6%) 11 (9.2%) 22 Over 50% of women with GDM pregnancies will progress to type 2 diabetes

A genome scale metabolic network for rice and accompanying analysis of tryptophan, auxin and serotonin biosynthesis regulation under biotic stress

Creator:: Dharmawardhana, Palitha, Ren, Liya, Amarasinghe, Vindhya, Monaco, Marcela, Thomason, Jim, Ravenscroft, Dean, McCouch, Susan, Ware, Doreen, and Jaiswal, Pankaj
Abstract:: Background: Functional annotations of large plant genome projects mostly provide information on gene function and gene families based on the presence of protein domains and gene homology, but not necessarily in association with gene expression or metabolic and regulatory networks. These additional annotations are necessary to understand the physiology, development...
Resource Type:: Article
Full Text:: we will provide database insights based on RiceCyc version 3.3. Beside discussing the development of

ScholarsArchive@OSU

Selfish Little Circles: Transmission Bias and Evolution of Large Deletion-Bearing Mitochondrial DNA in Caenorhabditis briggsae Nematodes

Palaeo-sea-level and palaeo-ice-sheet databases: problems, strategies, and perspectives

Evolutionary Biology for the 21st Century

Where to find 1.5 million yr old ice for the IPICS “Oldest-Ice” ice core

Technical note: Time lag correction of aquatic eddy covariance data measured in the presence of waves

Technical note: Time lag correction of aquatic eddy covariance data measured in the presence of waves

Mapping Migratory Bird Prevalence Using Remote Sensing Data Fusion

WikiPathways for plants: a community pathway curation portal and a case study in rice and arabidopsis seed development networks

Physician Care Patterns and Adherence to Postpartum Glucose Testing after Gestational Diabetes Mellitus in Oregon

A genome scale metabolic network for rice and accompanying analysis of tryptophan, auxin and serotonin biosynthesis regulation under biotic stress

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