The functioning of marine habitats needs to be understood in the context of the ecological relationships and associations between organisms and the physical and biogenic environment they inhabit. Thus, it becomes important to explore and define habitat features which contribute to these relationships and which are important in the life...
This study examines the spatial and temporal distribution and life history of the "offshore" component of the Northeastern Pacific spiny dogfish (Squalus acanthias) population. Distribution was examined in relation to latitude, depth, the Columbia River plume and large-scale climate changes. Fishery and survey data indicate that the Northeastern Pacific spiny...
Despite evidence that juvenile Chinook salmon (Oncorhynchus tshawytscha) utilize North Pacific estuaries for growth and salinity acclimation, research in the Columbia River estuary has lead to opposing hypotheses about the estuary’s importance as a salmon rearing environment. Many contemporary tagging studies indicate that salmon residency within the estuary is short...
Seasonal emergent wetlands in the Pacific Northwest have not been regarded traditionally as fish rearing habitat, despite access to such habitat when river flows overtop riverbanks and connect to the floodplain. As a result, restoration and enhancement projects to remediate for the loss of such wetland habitat are being implemented...
Tidal wetland channels provide rearing habitat for juvenile Chinook salmon as they emigrate from freshwater habitat and prepare to enter the ocean. Widespread diking and drainage of estuarine marshes for agricultural and urban development may have contributed to a decline in salmon abundance in the Pacific Northwest, prompting efforts to...
Anadromous coastal cutthroat trout Oncorhynchus clarkii clarkii may be highly dependent on estuaries, passing through them multiple times during their lifetime. However, few studies have investigated estuarine use by coastal cutthroat trout and it is often thought that estuaries serve primarily as migration corridors rather than rearing areas. We used...
Non-point agricultural contaminants, such as nitrogen, may lower groundwater quality and thereby impose health and environmental risks. The objective of this study is to evaluate tax policies to control agricultural pollutants in a spatially heterogeneous and dynamic setting. The focus of the study is non-point source nitrate contamination of groundwater...
Estuaries provide juvenile salmonids with highly productive feeding grounds, refugia from tidal fluctuations and predators, and acclimation areas for smoltification. However, these dynamic, fluctuating salinity environments may also be physiologically stressful to growing juvenile fish. In order to evaluate the costs and benefits of estuarine marshes to juvenile Chinook salmon,...
Hydrocarbon solvents are widely used in the production of paints, adhesives, dyes, polymers, plastics, textiles, printing inks, agricultural products and pharmaceuticals. While the neuropathic potential of aliphatic solvents was shown in the 1970s, little is known about the neuropathic potential of aromatic solvents. The present study examines such solvents, 1,2-diethylbenzene...
Pacific rockfishes (genus Sebastes) have attracted wide scientific and public interest from an evolutionary, fishery and conservation standpoints. This dissertation addresses several hypotheses involving spatial and temporal scales of genetic change in two overfished rockfishes, darkblotched (S. crameri) and canary rockfish (S. pinniger), using statistical analyses of genetic variation within...
A recent trend of enhancing freshwater emergent wetlands for waterfowl and other wildlife has raised concern about the effects of such measures on juvenile salmonids. We undertook this study to quantify the degree and extent of juvenile Pacific salmon Oncorhynchus spp. utilization of enhanced and unenhanced emergent wetlands within the...
Fish scales have long been used to reconstruct fine-scale habitat transitions such as the movement of juvenile fish from freshwater, estuary, and ocean environments. Despite the importance of life history information to fisheries management and conservation, few studies have validated that scale morphology accurately describes fish movement between these habitats....
Captive rearing programs (hatcheries) are often used in conservation and management efforts
for at-risk salmonid fish populations. However, hatcheries typically rear juveniles in environments
that contrast starkly with natural conditions, which may lead to phenotypic and/or genetic changes that adversely affect the performance of juveniles upon their release to the...
Full Text:
., & Fleming, I. A. (2015). Transcriptomic
Responses of Atlantic Salmon (Salmo salar) to Environmental
Captive rearing programs (hatcheries) are often used in conservation and management efforts
for at-risk salmonid fish populations. However, hatcheries typically rear juveniles in environments
that contrast starkly with natural conditions, which may lead to phenotypic and/or genetic changes that adversely affect the performance of juveniles upon their release to the...
Full Text:
and I. Fleming.
8
Table A. Atlantic salmon microarray probes identified as
Captive rearing programs (hatcheries) are often used in conservation and management efforts for at-risk salmonid fish populations. However, hatcheries typically rear juveniles in environments that contrast starkly with natural conditions, which may lead to phenotypic and/or genetic changes that adversely affect the performance of juveniles upon their release to the...
Secondary metabolites (SMs) play an integral role in the life history of most fungal species. Fungal metabolomic studies provide insights into how fungi perform certain ecological functions, how they compete and interact with other organisms, and the breadth of fungal chemodiversity. Fungal SMs have also been utilized for a variety...
In spite of considerable efforts to restore natural runs of anadromous salmonids in the Pacific Northwest, they remain at risk of extirpation. Along with many other factors influencing the decline, stocking from hatcheries over the past hundred years is often suggested to be a major cause. The listing of over...
Manufacturing industry drives economic activity and growth around the world, but manufacturing activities consume large amounts of material, energy, and labor resources. Therefore, the impacts of manufacturing need to be accounted for and reduced. Direct benefits of manufacturing are products and income, which, in turn, influence the lives of people...
Non-point agricultural contaminants, such as nitrogen, may lower groundwater quality and thereby impose health and environmental risks. The objective of this study is to evaluate tax policies to control agricultural pollutants in a spatially heterogeneous and dynamic setting. The focus of the study is non-point source nitrate contamination of groundwater...
Full Text:
An Abstract of the Thesis of
Ronald A. Fleming for the degree
Non-point agricultural contaminants, such as nitrogen, may lower groundwater quality and thereby impose health and environmental risks. The objective of this study is to evaluate tax policies to control agricultural pollutants in a spatially heterogeneous and dynamic setting. The focus of the study is non-point source nitrate contamination of groundwater...