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    <title>ScholarsArchive Collection: Biological Oceanography</title>
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    <link>http://ir.library.oregonstate.edu/dspace/simple-search</link>
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  <item rdf:about="http://hdl.handle.net/1957/8391">
    <title>Distribution, structure, and function of marine ecological communities in the northern California Current upwelling ecosystem</title>
    <link>http://hdl.handle.net/1957/8391</link>
    <description>Title: Distribution, structure, and function of marine ecological communities in the northern California Current upwelling ecosystem
&lt;br/&gt;
&lt;br/&gt;Abstract: Within systems characterized by substantial spatial and temporal variability, abundances of organisms tend to be higher in localized areas. Within the northern California Current system, the identification of such marine, biological hotspots would be of great importance to resource managers, conservationists, and research planners, and is consequently a growing area of research. Furthermore, in order to understand how&#xD;
ecosystems function and persist, it is necessary to know how ecological communities are distributed. The overall goal of this study is to provide further understanding regarding the functioning of marine ecosystems in such highly variable environments and to provide information about the distribution and structure of marine communities. Sampling was conducted during June and August of 2000 and 2002 as part of the U.S. GLOBEC mesoscale surveys from Newport, Oregon in the north to Crescent City, California in the south. A geostatistical approach was used to create surfaces used in a GIS to determine the distribution of various community characteristics. Two biological hotspots were identified and determined to persist in space and time, yet differed with respect to biological and physical features and in the amount of area covered. Various community analyses, including nonmetric multidimensional scaling, indicator species&#xD;
analysis, and cluster analysis were used to determine various community properties&#xD;
associated with the hotspots and non-hotspot regions. Results indicate that nekton&#xD;
biological hotspots in the northern California Current persist across differing&#xD;
environmental and biological conditions, although upwelling-based hotspots may be more susceptible to climatic conditions than retention-based hotspots. Analyses of the&#xD;
distribution of the functional groups within the region indicate that the predominant&#xD;
biological activity is spatially nonrandom and occurs within persistent, localized areas. Analyses of species associations suggest a moderate degree of redundancy. The presence of such complementary species within functional groups may confer the stability&#xD;
observed within these systems. The finding that large regional areas are composed of&#xD;
smaller, localized hotspots where a predominant amount of biological activity is&#xD;
occurring, suggests that the evaluation of large marine ecosystems may lead to erroneous&#xD;
or misleading results if they do not consider the more persistent, localized biological&#xD;
hotspots.
&lt;br/&gt;
&lt;br/&gt;Description: Graduation date: 2006</description>
  </item>
  <item rdf:about="http://hdl.handle.net/1957/8328">
    <title>Variability in mesoscale circulation and its effects on zooplankton distribution in the Northern California Current</title>
    <link>http://hdl.handle.net/1957/8328</link>
    <description>Title: Variability in mesoscale circulation and its effects on zooplankton distribution in the Northern California Current
&lt;br/&gt;
&lt;br/&gt;Abstract: In eastern boundary current upwelling ecosystems, mesoscale circulation features such as eddies and upwelling filaments play a prominent role in the transfer of water and the associated plankton from the productive nearshore to the oligotrophic deep sea. The relationship between mesoscale circulation, zooplankton distributions, and the across-shelf transport of coastal taxa and biomass in the California Current System was studied using data collected as part of the U.S. Global Ocean Ecosystems Dynamics (GLOBEC) Northeast Pacific Program. Sea surface height from &gt;13 years of satellite altimeter data was used to characterize the spatial and temporal variability in mesoscale circulation in the northern California Current (35°N-49°N) and explore mechanisms of variability. High spatial and temporal variation in mesoscale energy occurred. Energy was not strongly linked to upwelling winds, but did correspond to climate indices, indicating that basin-scale processes play a role in controlling the circulation. CTD casts, zooplankton net tows, and Acoustic Doppler Current Profiler (ADCP) velocities collected during a research cruise conducted in summer 2000 off Oregon and northern California were used to describe the effects of mesoscale circulation on distributions of zooplankton. During the cruise, a filament of the coastal upwelling jet extended seaward of Cape Blanco (42.8°N) resulting in the displacement of coastal zooplankton to &gt;100 km off the continental shelf. Velocities and standing stocks of zooplankton were used to estimate seaward transport of 0.5 Sv in the upper 100 m of the filament, in which zooplankton biomass averaged ~20 mg carbon/m³. That offshore transport equated to &gt;900 metric tons of carbon each day, and 4-5x10⁴ tons over the 6-8 week lifetime of the circulation feature. Although the flux represented a small portion (&lt;2%) of the shelf zooplankton biomass, the transport resulted in an offshore "hot-spot" in which biomass was 3-4X higher than in the surrounding ocean. Distributions of early life history stages of euphausiids indicated that retention of coastal populations may be strongly affected by the offshore advection. Finally, satellite sea surface temperature (SST) and sampling conducted during five summers were used to explore variability in the relationship between mesoscale circulation features and distributions of zooplankton. Circulation patterns differed among cruises and were reflected in zooplankton distributions. Circulation features resulted in the occurrence of cold surface water and coastal taxa offshore, but species abundances and presence/absence of taxa at specific locations were not predictable from satellite SSTs. These results are relevant to studies of ecosystem dynamics and the global carbon cycle because mesoscale circulation plays an important role in the seaward transport of carbon, retention and loss of taxa from the continental shelf, and creation of offshore structure which may be exploited by upper trophic level organisms.
&lt;br/&gt;
&lt;br/&gt;Description: Graduation date: 2008</description>
  </item>
  <item rdf:about="http://hdl.handle.net/1957/7448">
    <title>Characterizing the habitat and diving behavior of satellite-tagged blue whales (Balaenoptera musculus) off California</title>
    <link>http://hdl.handle.net/1957/7448</link>
    <description>Title: Characterizing the habitat and diving behavior of satellite-tagged blue whales (Balaenoptera musculus) off California
&lt;br/&gt;
&lt;br/&gt;Abstract: This study was designed to identify and characterize areas of concentrated use and diving behavior of blue whales (Balaenoptera musculus) off the California coast. During the summer of 2004, thirteen blue whales were tagged with implantable Telonics ST-15 Argos satellite-monitored radio tags and five were tagged with Telonics ST-21 Argos satellite-monitored depth of dive tags. Tag duration averaged 100 d with a total of 2159 locations recorded. Whales generally remained near the continental slope and were most often found at the west end of the Santa Barbara Channel, near the Gulf of the Farallones, or between Cape Mendocino and Cape Blanco. Analysis of the 95% kernel density distributions of whale locations showed a one degree increase in sea surface temperature (SST) was correlated with a decrease in whale density by 7% (p &lt; 0.0001) while density was highest at a surface chlorophyll level of 4.5 mg/l and a water depth of 1573 m (p &lt; 0.001 each). These results show that tagged whales were most likely to be found in areas of strong upwelling along the slope edge. Dive data from 414 summary periods showed whales spent at least 50% of their time in the top 50 m of the water column and up to 94% of their time there at night. Daytime average dive depth was 2.3 times deeper than during the night, probably due to the vertical migration of some euphausiid species upon which blue whales feed. Differences in mean number of dives and mean maximum dive duration suggest a behavior change during the night, possibly a period of rest. Whales dove less frequently as swim speed increased, and more frequently as water depth increased. No significant variation in daytime average dive depth was observed between clustered and linear location types, however fewer total dives were made during linear location types suggesting whales were making exploratory dives to foraging depths while traveling.
&lt;br/&gt;
&lt;br/&gt;Description: Graduation date: 2008</description>
  </item>
  <item rdf:about="http://hdl.handle.net/1957/3191">
    <title>Phosphorus physiology and environmental forcing of oceanic cyanobacteria, primarily Trichodesmium spp.</title>
    <link>http://hdl.handle.net/1957/3191</link>
    <description>Title: Phosphorus physiology and environmental forcing of oceanic cyanobacteria, primarily Trichodesmium spp.
&lt;br/&gt;
&lt;br/&gt;Abstract: The biological transformation of dinitrogen gas (N2) into combined forms(termed N2 fixation) by certain genera of oceanic cyanobacteria represents the largest incoming flux of nitrogen to the global ocean. As such, biological nitrogen fixation&#xD;
plays a significant role in the regulation of oceanic productivity and the export of&#xD;
carbon and nitrogen out of the sun-lit surface waters. Currently, our knowledge of the biogeochemical and ecological significance of N2-fixing organisms is restricted by our relative inability to define mechanistically the relevant chemical, biological and physical controls of the production and abundance of biological N2 fixation in the marine environment. The four chapters that form the main body of this dissertation touch upon specific aspects of the controls of the production and abundance of N2-fixing organisms, particularly that of the cyanobacterial genus Trichodesmium.&#xD;
Chapter II defines the range of intracellular elemental composition exhibited by Trichodesmium and identifies phosphorus (P) as a key factor limiting N2 fixation by populations of this organism residing in specific regions of the Atlantic and Pacific oceans. Chapter III explores vertical migration as a physiological adaptation relevant to the growth of this same cyanobacterium, Trichodesmium. Results from this work indicate that vertical migration may allow a subset of the population to exploit the separation of light and nutrients under stratified oligotrophic conditions, thus potentially supplementing their P requirements for growth. Chapter IV examines time-series&#xD;
records in an attempt to define the physical characteristics of the environment that may regulate surface blooms of cyanobacteria. These analyses indicate that season, sea surface temperature and mixed layer depth are the most constrained predictors of blooms of N2-fixing cyanobacteria in the North Pacific. Lastly, Chapter V identifies a novel region of the ocean inhabited by N2-fixing organisms.
&lt;br/&gt;
&lt;br/&gt;Description: Graduation date: 2007</description>
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