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Browsing by Subject "Bioinformatics"

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Browsing by Subject "Bioinformatics"

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  • Algorithms for massive biological datasets 
    Bryant, Douglas W. (Douglas Wesley) (2011-10-04)
    Within the past several years the technology of high-throughput sequencing has transformed the study of biology by offering unprecedented access to life's fundamental building block, DNA. With this transformation's poten ...
  • Bioinformatics resource manager v2.3: an integrated software environment for systems biology with microRNA and cross-species analysis tools 
    Tilton, Susan C.; Tal, Tamara L.; Scroggins, Sheena M.; Franzosa, Jill A.; Peterson, Elena S.; Tanguay, Robert L.; Waters, Katrina M. (BioMed Central Ltd., 2012-11-23)
    Background: MicroRNAs (miRNAs) are noncoding RNAs that direct post-transcriptional regulation of protein coding genes. Recent studies have shown miRNAs are important for controlling many biological processes, including n ...
  • Conserved properties in the metagenome of a large bacterioplankton population 
    Wilhelm, Larry John (2007-04-03)
    Candidatus Pelagibacter ubique is the first cultured representative of the SAR11 clade, a clade that is found throughout the oceans and accounts for approximately 25% of all bacterial cells [1]. It has a streamlined gen ...
  • The Plant Ontology as a Tool for Comparative Plant Anatomy and Genomic Analyses 
    Cooper, Laurel; Walls, Ramona L.; Elser, Justin; Gandolfo, Maria A.; Stevenson, Dennis W.; Smith, Barry; Preece, Justin; Athreya, Balaji; Mungall, Christopher J.; Rensing, Stefan; Hiss, Manuel; Lang, Daniel; Reski, Ralf; Berardini, Tanya Z.; Li, Donghui; Huala, Eva; Schaeffer, Mary; Menda, Naama; Arnaud, Elizabeth; Shrestha, Rosemary; Yamazaki, Yukiko; Jaiswal, Pankaj (Oxford University Press on behalf of Japanese Society of Plant Physiologists, 2013-02)
    The Plant Ontology (PO;http://www.plantontology.org/" is a publicly available, collaborative effort to develop and maintain a controlled, structured vocabulary ('ontology') of terms to describe plant anatomy, morphology ...
  • Sequence verification of synthetic DNA by assembly of sequencing reads 
    Wilson, Mandy L.; Cai, Yizhi; Hanlon, Regina; Taylor, Samantha; Chevreux, Bastien; Setubal, Joao C.; Tyler, Brett M.; Peccoud, Jean (Oxford University Press, 2012-10-04)
    Gene synthesis attempts to assemble user-defined DNA sequences with base-level precision. Verifying the sequences of construction intermediates and the final product of a gene synthesis project is a critical part of the ...

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