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Browsing Department of Botany and Plant Pathology by Title

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Browsing Department of Botany and Plant Pathology by Title

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  • Youens-Clark, Ken; Buckler, Ed; Casstevens, Terry; Dharmawardhana, Palitha; Jaiswal, Pankaj; et al. (Oxford University Press, 2010-11-13)
    Now in its 10th year, the Gramene database (http://www.gramene.org) has grown from its primary focus on rice, the first fully-sequenced grass genome, to become a resource for major model and crop plants including Arab ...
  • Ni, Junjian; Pujar, Anuradha; Youens-Clark, Ken; Jaiswal, Pankaj; et al. (Oxford University Press, 2009-05-08)
    Gramene is a comparative information resource for plants that integrates data across diverse data domains. In this article, we describe the development of a quantitative trait loci (QTL) database and illustrate how it c ...
  • Jaiswal, Pankaj; Ni, Junjian; Yap, Immanuel; et al. (Oxford University Press, 2006)
    Rice, maize, sorghum, wheat, barley and the other major crop grasses from the family Poaceae (Gramineae) are mankind’s most important source of calories and contribute tens of billions of dollars annually to the worl ...
  • Liang, Chengzhi; Jaiswal, Pankaj; Hebbard, Claire; et al. (Oxford University Press, 2007-11-04)
    Gramene (www.gramene.org) is a curated resource for genetic, genomic and comparative genomics data for the major crop species, including rice, maize, wheat and many other plant (mainly grass) species. Gramene is an o ...
  • Ware, Doreen; Jaiswal, Pankaj; Ni, Junjian; et al. (Oxford University Press, 2002-01-01)
    Gramene (http://www.gramene.org) is a comparative genome mapping database for grasses and a community resource for rice. Rice, in addition to being an economically important crop, is also a model monocot for understandin ...
  • Maree, Hans J.; Almeida, Rodrigo P. P.; Bester, Rachelle; Chooi, Kar Mun; Cohen, Daniel; Dolja, Valerian V.; Fuchs, Marc F.; Golino, Deborah A.; Jooste, Anna E. C.; Martelli, Giovanni P.; Naidu, Rayapati A.; Rowhani, Adib; Saldarelli, Pasquale; Burger, Johan T. (Frontiers Research Foundation, 2013-04-16)
    Grapevine leafroll disease (GLD) is one of the most important grapevine viral diseases affecting grapevines worldwide. The impact on vine health, crop yield, and quality is difficult to assess due to a high number of var ...
  • Peck, JeriLynn E. (1996-04-29)
    With the increased recognition of moss as a secondary forest product has come an increased concern for the ecological ramifications of moss harvest. Three issues of primary concern are (1) characterizing the epiphyte com ...
  • Fahlgren, Noah; Howell, Miya D.; Kasschau, Kristin D.; Sullivan, Christopher M.; Cumbie, Jason S.; Givan, Scott A.; Law, Theresa F.; Grant, Sarah R.; Dangl, Jeffrey L.; Carrington, James C. (PLoS ONE, 2007-02)
    In plants, microRNAs (miRNAs) comprise one of two classes of small RNAs that function primarily as negative regulators at the posttranscriptional level. Several MIRNA genes in the plant kingdom are ancient, with conserv ...
  • Matsunaga, Kelly K. S.; Stockey, Ruth A.; Tomescu, Alexandru M. F. (Botanical Society of America, 2013-02)
    • Premise of the study: Colonists of even the most inhospitable environments, lichens are present in all terrestrial ecosystems. Because of their ecological versatility and ubiquity, they have been considered excellent ...
  • Bienapfl, John C. (2003-09-24)
    A necrosis at the tip of cones was observed on hop (Humulus lupulus), cultivar "Nugget", grown in Oregon in the early 1990's. Fusarium sambucinum and F. avenaceum were recovered from symptomatic cones in 1998 and preli ...
  • Straub, Shannon C. K.; Cronn, Richard C.; Edwards, Christopher; Fishbein, Mark; Liston, Aaron (Oxford University Press, 2013-09-12)
    Horizontal gene transfer (HGT) of DNA from the plastid to the nuclear and mitochondrial genomes of higher plants is a common phenomenon; however, plastid genomes (plastomes) are highly conserved and have generally been ...
  • Kepler, Ryan M.; Sung, Gi-Ho; Harada, Yukio; Tanaka, Kazuaki; Tanaka, Eiji; Hosoya, Tsuyoshi; Bischoff, Joseph F.; Spatafora, Joseph W. (Botanical Society of America, Inc., 2012-03)
    Premise of study: This research seeks to advance understanding of conditions allowing movement of fungal pathogens among hosts. The family Clavicipitaceae contains fungal pathogens exploiting hosts across three kingdoms ...
  • Zasada, Inga A.; Peetz, Amy; Wade, Nadine; Navarre, Roy A.; Ingham, Russ E. (The Society of Nematologists, 2013-09)
    Globodera ellingtonae was detected in Oregon in 2008. In order to make decisions regarding the regulation of this nematode, knowledge of its biology is required. We determined the host status of a diversity of potato (S ...
  • Pandelova, Iovanna; Figueroa, Melania; Wilhelm, Larry J.; Manning, Viola A.; Mankaney, Aakash N.; Mockler, Todd C.; Ciuffetti, Lynda M. (Public Library of Science, 2012-07-06)
    Pyrenophora tritici-repentis (Ptr), a necrotrophic fungus and the causal agent of tan spot of wheat, produces one or a combination of host-selective toxins (HSTs) necessary for disease development. The two most studied t ...
  • Pandelova, Iovanna; Figueroa, Melania; Wilhelm, Larry J.; Manning, Viola A.; Mankaney, Aakash N.; Mockler, Todd C.; Ciuffetti, Lynda M. (Public Library of Science, 2012-07-06)
    Pyrenophora tritici-repentis (Ptr), a necrotrophic fungus and the causal agent of tan spot of wheat, produces one or a combination of host-selective toxins (HSTs) necessary for disease development. The two most studied t ...
  • Sáenz, Pilar; Salvador, Beatriz; Simón-Mateo, Carmen; Kasschau, Kristin D.; Carrington, James C.; García, Juan Antonio (American Society for Microbiology, 2002-02)
    Plum pox virus (PPV) is a member of the Potyvirus genus that, in nature, infects trees of the Prunus genus. Although PPV infects systemically several species of the Nicotiana genus, such as N. clevelandii and N. bentha ...
  • Parmentier, Ingrid; Duminil, Jerome; Kuzmina, Maria; Philippe, Morgane; Thomas, Duncan W.; Kenfack, David; Chuyong, George B.; Cruaud, Corinne; Hardy, Olivier J. (Public Library of Science, 2013-04-02)
    Background: DNA barcoding of rain forest trees could potentially help biologists identify species and discover new ones. However, DNA barcodes cannot always distinguish between closely related species, and the size and c ...
  • Atkinson, Brian A.; Rothwell, Gar W.; Stockey, Ruth A. (University of Chicago Press, 2014-01-23)
    PREMISE OF RESEARCH. The occurrence of six ovulate cones and six leafy branching systems, two of which show attachment of the ovulate cone, reveals a new cunninghamioid fossil conifer from the Cretaceous Apple Bay loca ...
  • McCune, B.; Divakar, P. K.; Upreti, D. K. (Cambridge University Press, 2012-09)
    Morphological and chemical studies of Hypogymnia from the Himalayas revealed one new species, three species new to the region, and a previously unrecognized synonym. Hypogymnia crystallina, distinguished by its rimmed ...

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