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Browsing Faculty Research Publications (Botany and Plant Pathology) by Title

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Browsing Faculty Research Publications (Botany and Plant Pathology) by Title

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  • Behrenfeld, Michael J. (Ecological Society of America, 2010-04)
    The Critical Depth Hypothesis formalized by Sverdrup in 1953 posits that vernal phytoplankton blooms occur when surface mixing shoals to a depth shallower than a critical depth horizon defining the point where phytop ...
  • Sun, Jin-Hua; Hyman, Michael R.; Arp, Daniel J. (American Chemical Society, 1992)
    Acetylene is a slow-binding inhibitor of the Ni- and Fe-containing dimeric hydrogenase isolated from Azotobacter vinelandii. Acetylene was released from hydrogenase during the recovery from inhibition. This indicates t ...
  • Dupouy, C.; Benielli-Gary, D.; Neveux, J.; Dandonneau, Y.; Westberry, T. K. (Copernicus Publications, 2011)
    Trichodesmium, a major colonial cyanobacterial nitrogen fixer, forms large blooms in NO₃-depleted tropical oceans and enhances CO₂ sequestration by the ocean due to its ability to fix dissolved dinitrogen. Thus, its impo ...
  • Schadd, Mary C.; Haldeman-Chahill, Ruth; Cronin, Stephen; Carrington, James C. (American Society for Microbiology, 1996-10)
    A mutational analysis was conducted to investigate the functions of the tobacco etch potyvirus VPgproteinase (NIa) protein in vivo. The NIa N-terminal domain contains the VPg attachment site, whereas the C-terminal dom ...
  • Gent, David H.; Nelson, Mark E.; Grove, Gary G.; Mahaffee, Walter F.; Turechek, William W.; Woods, Joanna L. (The American Phytopathological Society, 2012-09)
    Downy mildew (caused by Pseudoperonospora humuli) and powdery mildew (caused by Podosphaera macularis) are important diseases of hop in the Pacific Northwest United States, and cultural practices may affect the severity ...
  • Carrington, James C.; Freed, Deon D.; Sanders, Tatia C. (American Society for Microbiology, 1989-10)
    The virus-encoded proteins of tobacco etch virus (TEV), a plant potyvirus, arise by proteolytic processing of a large polyprotein precursor. The TEV genome codes for two proteinases, a 49-kilodalton proteinase and help ...
  • Salamone, Isabella; Govindarajulu, Rajanikanth; Falk, Stacey; Parks, Matthew; Liston, Aaron; Ashnam, Tia-Lynn (Botanical Society of America, 2013-05)
    Premise of the Study: Hybrid zones provide "natural laboratories" for understanding the processes of selection, reinforcement, and speciation. We sought to gain insight into the degree of introgression and the extent of ...
  • Meyers, Stephen; Liston, Aaron (University of Chicago Press, 2008-09)
    Plantago ovata Forssk. (Plantaginaceae) is a species that, in North America, inhabits desert and Mediterranean habitats of the southwest United States, northwest Mexico, and the Channel Islands of California and Mexico. ...
  • Wijayratne, Upekala C.; Pyke, David A. (Botanical Society of America, 2012-03)
    • Premise of the study: Seed longevity and persistence in soil seed banks may be especially important for population persistence in ecosystems where opportunities for seedling establishment and disturbance are unpredicta ...
  • Carrington, James C.; Freed, Deon D. (American Society of Microbiology, 1990-04)
    The RNA genome of tobacco etch virus (TEV), a plant potyvirus, functions as an mRNA for synthesis of a 346-kilodalton polyprotein that undergoes extensive proteolytic processing. The RNA lacks a normal 5' cap structure ...
  • Hyman, Michael R.; Ensign, Scott A.; Arp, Daniel J.; Ludden, Paul W. (American Chemical Society, 1989)
    Carbonyl sulfide (COS) has been investigated as a rapid-equilibrium inhibitor of CO oxidation by the CO dehydrogenase purified from Rhodospirillum rubrum. The kinetic evidence suggests that the inhibition by COS is lar ...
  • Asmussen, Conny B.; Liston, Aaron (Botanical Society of America, Inc., 1998-03)
    Mapped cpDNA restriction site characters were analyzed cladistically and the resulting phylogenetic hypotheses were used to test monophyly and relationships of the infrageneric classification of Lathyrus (Fabaceae) prop ...
  • Turechek, W. W.; Madden, L. V.; Gent, D. H. (American Phytopathological Society, 2011-12)
    The binary power law (BPL) has been successfully used to characterize heterogeneity (overdispersion or small-scale aggregation) of disease incidence for many plant pathosystems. With the BPL, the log of the observed vari ...
  • Li, Chuan; Rudi, Heidi; Stockinger, Eric J.; Cheng, Hongmei; Cao, Moju; Fox, Samuel E.; Mockler, Todd C.; Westereng, Bjorge; Fjellheim, Siri; Robnli, Odd Arne; Sandve, Simen R. (BioMed Central Ltd., 2012-05-08)
    Background: Little is known about the potential of Brachypodium distachyon as a model for low temperature stress responses in Pooideae. The ice recrystallization inhibition protein (IRIP) genes, fructosyltransferase (FS ...
  • Ceron-Souza, Ivania; Bermingham, Eldredge; McMillan, William Owen; Jones, Frank Andrew (BioMed Central Ltd., 2012-10-18)
    Background: Mangroves are ecologically important and highly threatened forest communities. Observational and genetic evidence has confirmed the long distance dispersal capacity of water-dispersed mangrove seeds, but less ...
  • Condon, Bradford J.; Leng, Yueqiang; Wu, Dongliang; Bushley, Kathryn E.; Ohm, Robin A.; Otillar, Robert; Martin, Joel; Schackwitz, Wendy; Grimwood, Jane; MohdZainudin, NurAinIzzati; Xue, Chunsheng; Wang, Rui; Manning, Viola A.; Dhillon, Braham; Tu, Zheng Jin; Steffenson, Brian J.; Salamov, Asaf; Sun, Hui; Lowry, Steve; LaButti, Kurt; Han, James; Copeland, Alex; Lindquist, Erika; Barry, Kerrie; Schmutz, Jeremy; Baker, Scott E.; Ciuffetti, Lynda M.; Grigoriev, Igor V.; Zhong, Shaobin; Turgeon, B. Gillian (Public Library of Science, 2013-01-24)
    The genomes of five Cochliobolus heterostrophus strains, two Cochliobolus sativus strains, three additional Cochliobolus species (Cochliobolus victoriae, Cochliobolus carbonum, Cochliobolus miyabeanus), and closely relat ...
  • Manning, Viola A.; Pandelova, Iovanna; Dhillon, Braham; Wilhelm, Larry J.; Goodwin, Stephen B.; Berlin, Aaron M.; Figueroa, Melania; Freitag, Michael; Hane, James K.; Henrissat, Bernard; Holman, Wade H.; Kodira, Chinnappa D.; Martin, Joel; Oliver, Richard P.; Robbertse, Barbara; Schackwitz, Wendy; Schwartz, David C.; Spatafora, Joseph W.; Turgeon, B. Gillian; Yandava, Chandri; Young, Sarah; Zhou, Shiguo; Zeng, Qiandong; Grigoriev, Igor V.; Ma, Li-Jun; Ciuffetti, Lynda M. (The Genetics Society of America, 2013-01)
    Pyrenophora tritici-repentis is a necrotrophic fungus causal to the disease tan spot of wheat, whose contribution to crop loss has increased significantly during the last few decades. Pathogenicity by this fungus is attr ...
  • Loper, Joyce E.; Hassan, Karl A.; Mavrodi, Dmitri V.; Davis, Edward W., II; Lim, Chee Kent; Shaffer, Brenda T.; Elbourne, Liam D. H.; Stockwell, Virginia O.; Hartney, Sierra L.; Breakwell, Katy; Henkels, Marcella D.; Tetu, Sasha G.; Rangel, Lorena I.; Kidarsa, Teresa A.; Wilson, Neil L.; van de Mortel, Judith E.; Song, Chunxu; Blumhagen, Rachel; Radune, Diana; Hostetler, Jessica B.; Brinkac, Lauren M.; Durkin, A. Scott; Kluepfel, Daniel A.; Wechter, W. Patrick; Anderson, Anne J.; Kim, Young Cheol; Pierson, Leland S., III; Pierson, Elizabeth A.; Lindow, Steven E.; Kobayashi, Donald Y.; Raaijmakers, Jos M.; Weller, David M.; Thomashow, Linda S.; Allen, Andrew E.; Paulsen, Ian T. (Public Library of science, 2012-07)
    We provide here a comparative genome analysis of ten strains within the Pseudomonas fluorescens group including seven new genomic sequences. These strains exhibit a diverse spectrum of traits involved in biological contr ...
  • Loper, Joyce E.; Hassan, Karl A.; Mavrodi, Dmitri V.; Davis, Edward W. II; Lim, Chee Kent; Shaffer, Brenda T.; Elbourne, Liam D. H.; Stockwell, Virginia O.; Hartney, Sierra L.; Breakwell, Katy; Henkels, Marcella D.; Tetu, Sasha G.; Rangel, Lorena I.; Kidarsa, Teresa A.; Wilson, Neil L.; van de Mortel, Judith E.; Song, Chunxu; Blumhagen, Rachel; Radune, Diana; Hostetler, Jessica B.; Brinkac, Lauren M.; Durkin, A. Scott; Kluepfel, Daniel A.; Wechter, W. Patrick; Anderson, Anne J.; Kim, Young Cheol; Pierson, Leland S. III; Pierson, Elizabeth A.; Lindow, Steven E.; Kobayashi, Donald Y.; Raaijmakers, Jos M.; Weller, David M.; Thomashow, Linda S.; Allen, Andrew E.; Paulsen, Ian T. (Public Library of Science, 2012-07-05)
    We provide here a comparative genome analysis of ten strains within the Pseudomonas fluorescens group including seven new genomic sequences. These strains exhibit a diverse spectrum of traits involved in biological contr ...
  • Kroese, Duncan; Zasada, Inga A.; Ingham, Russell E. (The Society of Nematologists, 2011-09)
    Laboratory-based methods to test egg viability include staining with Meldola's Blue and/or juvenile (J2) hatching assays using potato root diffusate (PRD). These two methods have not been tested under identical condition ...

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