Browsing Technical Reports (Electrical Engineering and Computer Science) by Subject "Sequence alignment (Bioinformatics) -- Computer programs"

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Improved parallel and sequential walking tree methods for biological string alignments

Oregon State University. Dept. of Computer Science; Cull, Paul, 1943-; Hsu, Tai C. (Corvallis, OR : Oregon State University, Dept. of Computer Science, 1999)

Approximate string matching is commonly used to align genetic sequences (DNA or RNA) to determine their shared characteristics. Most genetic string matching methods are based on the edit-distance model, which does not p ...