Index Catalog // ScholarsArchive@OSU

Development and Application of Tools for Genetic Analysis of Clonal Populations

Creator:: Kamvar, Zhian N.
Abstract:: Research on the population genetics of microbial organisms requires the use of specialized analyses designed for clonal organisms to avoid violating the assumptions of traditional population genetic models. The tools necessary for performing these analyses existed as a set of unrelated software with non-overlapping capabilities and did not cover all...
Resource Type:: Dissertation
Full Text:: , written in the R statistical language, available on all computing platforms. This package is designed for

Dataset for genomic resources for the neotropical tree genus Cedrela (Meliaceae) and its relatives

Creator:: Finch, Kristen N.
Abstract:: This dataset is available as supplement for a research article submitted in 2018 and accepted in 2019. Genomic resources for the Neotropical tree genus Cedrela (Meliaceae) and its relatives. By Kristen N. Finch, B.A.; F. Andrew Jones, Ph.D.; Richard Cronn, Ph.D. Tree species in the genus Cedrela are threatened by...
Resource Type:: Dataset
Full Text:: , and the chloroplast genome reference for a single specimen, CEOD_NYBG (C. odorata from the living

Thauera butanivorans sp. nov., a C₂–C₉ alkane-oxidizing bacterium previously referred to as ‘Pseudomonas butanovora’

Creator:: Dubbels, Bradley L., Sayavedra-Soto, Luis A., Bottomley, Peter J., and Arp, Daniel J.
Abstract:: The placement of ‘Pseudomonas butanovora’ in the genus Thauera was proposed previously, based on 16S rRNA gene sequence analysis, upon further studies of taxonomical characteristics. In this study, physiological characteristics and DNA–DNA reassociation data are presented and the transfer of ‘P. butanovora’ to the genus Thauera is proposed. The original...
Resource Type:: Article
Full Text:: , L. H., Moore, W. E. C., Murray, R. G. E. & other authors (1987). International Committee on

Biosystematics of parsley-ferns, Cryptogramma R. Br., in western North America

Creator:: Alverson, Edward R.
Abstract:: A biosystematic investigation of Cryptogramma section Cryptogramma in western North America has been directed towards resolution of two separate taxonomic questions. Results of this research support the hypothesis that a previously undescribed diploid (2n = 30 II) taxon, C. cascadensis, is present along with the common and widespread C. acrostichoides....
Resource Type:: Masters Thesis

Role of GacSA Two-component System and Bacterial Surface Attachment in Pseudomonas syringae Virulence

Creator:: O'Malley, Megan R.
Abstract:: Pseudomonas syringae are plant pathogenic bacteria that cause disease by rapidly multiplying within the aboveground tissues of host plants. Growth of P. syringae within plant host tissues requires the disarmament of host immune defenses that limit microbial growth. To combat host defenses, P. syringae deploys a type III secretion system...
Resource Type:: Dissertation
Full Text:: ., Lund, S. P., Scott, R. A., Greenwald, J. W., Records, A. H., Nettleton, D., Lindow, S. E., Gross, D. C

Physiology of senescence of the shoot apex in Pisum sativum L.

Creator:: Ecklund, Paul Richard, 1941-
Abstract:: Shoot apex senescence is defined as the collective progressive and deteriorative processes which ultimately terminate the functional life of the shoot apex. Senescence of shoot apices of Pisum sativum L. 'Alaska' as measured by cessation of stem elongation was delayed by removal of flowers and by treatment with gibberellin A₃...
Resource Type:: Dissertation
Full Text:: OF THE SHOOT APEX IN PISUM SATIVUM L. Abstract approved: Redacted for privacy Thomas C. Moore

Development of in vitro lily scale budlets as related to virus elimination

Creator:: Ruttum, Joanne C.
Abstract:: Lily hybrids vary in their ability to produce virus-free (VF) bulblets when grown from virus-infected scales in tissue culture. Asiatic hybrids typically produce a higher percentage of in vitro VF scale bulblets than do Lilium longiflorum cultivars. Three hypotheses concerning the cause of this variation are tested on five lily...
Resource Type:: Masters Thesis
Full Text:: virus elimination AN ABSTRACT OF THE THESIS OF Joanne C. Ruttum for the degree of Master of Science

Distinct Argonaute-mediated 22G-RNA pathways direct genome surveillance in the C. elegans germline

Creator:: Gu, Weifeng, Shirayama, Masaki, Conte Jr., Darryl, Vasale, Jessica, Batista, Pedro J., Claycomb, Julie M., Moresco, James J., Youngman, Elaine, Keys, Jennifer, Stoltz, Matthew J., Chen, Chun-Cheih G., Chaves, Daniel A., Duan, Shenghua E., Kasschau, Krisitin D., Fahlgren, Noah, Yates III, John R., Mitani, Shohei, Carrington, James C., and Mello, Craig C.
Abstract:: Endogenous small RNAs (endo-siRNAs) interact with Argonaute (AGO) proteins to mediate sequence-specific regulation of diverse biological processes. Here, we combine deep-sequencing and genetic approaches to explore the biogenesis and function of endo-siRNAs in C. elegans. We describe conditional alleles of the dicer-related helicase, drh-3, that abrogate both RNA interference and...
Resource Type:: Article
Full Text:: , Noah Falgren6, John R. Yates III4, Shohei Mitani7, James C. Carrington6, and Craig C. Mello1,2

Within-population genetic structure differs between two sympatric sister-species of ectomycorrhizal fungi, Rhizopogon vinicolor and R. vesiculosus

Creator:: Dunham, Susie M., Mujic, Alija Bajro, Spatafora, Joseph W., and Kretzer, Annette M.
Abstract:: Using spatial autocorrelation analysis, we examined the within-population genetic structure of Rhizopogon vinicolor and R. vesiculosus, two hypogeous ectomycorrhizal (EM) species that are sympatric sister taxa known to differ in their clonal structure. We collected 121 sporocarps and 482 tuberculate EM of both species from a 20 ha forest stand...
Resource Type:: Article
Full Text:: sympatric sister-species of ectomycorrhizal fungi, Rhizopogon vinicolor and R. vesiculosus Susie M. Dunham1

Hybridization between Castilleja levisecta and C. hispida : Implications for Pacific Northwest Prairie Management

Creator:: Sandlin, Isaac J., III
Abstract:: Conservation conflicts may develop on restoration sites with multiple species recovery objectives. For example, on Pacific Northwest prairies, the co-planting of the diploid cytotype of the common native wildflower Castilleja hispida with the endangered wildflower C. levisecta has resulted in putative Castilleja hybrids on restoration sites, prompting fears that genetic...
Resource Type:: Masters Thesis
Full Text:: March 15, 2018. Title: Hybridization between Castilleja levisecta and C. hispida: Implications for

ScholarsArchive@OSU

Development and Application of Tools for Genetic Analysis of Clonal Populations

Dataset for genomic resources for the neotropical tree genus Cedrela (Meliaceae) and its relatives

Thauera butanivorans sp. nov., a C₂–C₉ alkane-oxidizing bacterium previously referred to as ‘Pseudomonas butanovora’

Biosystematics of parsley-ferns, Cryptogramma R. Br., in western North America

Role of GacSA Two-component System and Bacterial Surface Attachment in Pseudomonas syringae Virulence

Physiology of senescence of the shoot apex in Pisum sativum L.

Development of in vitro lily scale budlets as related to virus elimination

Distinct Argonaute-mediated 22G-RNA pathways direct genome surveillance in the C. elegans germline

Within-population genetic structure differs between two sympatric sister-species of ectomycorrhizal fungi, Rhizopogon vinicolor and R. vesiculosus

Hybridization between Castilleja levisecta and C. hispida : Implications for Pacific Northwest Prairie Management

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