Index Catalog // ScholarsArchive@OSU

Evolution and ecology of the Ceanothus-Frankia symbiosis

Creator:: Jeong, Soon-Chun
Abstract:: The evolutionary relationship between Frankia and actinorhizal plants was evaluated by reconstructing molecular phylogenetic trees from nifH, 16S rDNA, and rbcL nucleotide sequences. Subgroupings in Frankia phylogenetic trees reconstructed from nifH and from 16S rDNA sequences were consistent in terms of plant origins of Frankia strains. Although the branching order...
Resource Type:: Dissertation
Full Text:: Ceanothus as assessed by RFLP patterns from single nodule lobes. Soil Biol Biochem 26:547-552 Baker, D

The glutamine synthetases in soybean root nodules and free-living Rhizobium japonicum

Creator:: Guevara, Juan Garcia
Abstract:: Glutamine synthetase activity is present in both the cytosol and bacteroid fractions of soybean root nodules. Total activity measurements indicate that at least 90% of the activity in nodules is located in the cytosol. Results reported by McParland, et al. (29), showed that many properties of glutamine synthetase from nodule...
Resource Type:: Dissertation
Full Text:: thank Drs. R. S. Quatrano, D. J. Armstrong, W. D. Loomis and D. Richardson for serving as members of

Pyrenophora tritici-repentis : investigation of factors that contribute to pathogenicity

Creator:: Holman, Thomas W.
Abstract:: Pyrenophora tritici-repentis (Ptr) is the necrotrophic fungus responsible for tan spot of wheat (Triticum aestivum). Ptr causes disease on susceptible wheat cultivars through the production and secretion of host-selective toxins (HSTs). HSTs are compounds that are only known to be produced by fungi and considered to be primary determinants of...
Resource Type:: Masters Thesis
Full Text:: . 2006. Nature. 444:323–329. S tr en g th o f d ef en se r es p o n se R-Avr Strong

Finding Our Way through Phenotypes

Creator:: Deans, Andrew R., Lewis, Suzanna E., Huala, Eva, Anzaldo, Salvatore S., Ashburner, Michael, Balhoff, James P., Blackburn, David C., Blake, Judith A., Burleigh, J. Gordon, Chanet, Bruno, Cooper, Lauren D., Courtot, Mélanie, Csösz, Sándor, Cul, Hong, Dahdul, Wasila, Das, Sandip, Dececchi, T. Alexander, Dettal, Agnes, Diogo, Rui, Druzinsky, Robert E., Dumontier, Michel, Franz, Nico M., Friedrich, Frank, Gkoutos, George V., Haendel, Melissa, Harmon, Luke J., Hayamizu, Terry F., He, Yongqun, Hines, Heather M., Ibrahim, Nizar, Jackson, Laura M., Jaiswal, Pankaj, James-Zorn, Christina, Köhler, Sebastian, Lecointre, Guillaume, Lapp, Hilmar, Lawrence, Carolyn J., Le Novère, Nicolas, Lundberg, John G., Macklin, James, Mast, Austin R., Midford, Peter E., Mikó, István, Mungall, Christopher J., Oellrich, Anika, Osumi-Sutherland, David, Parkinson, Helen, Ramírez, Martín J., Richter, Stefan, Robinson, Peter N., Ruttenberg, Alan, Schulz, Katja S., Segerdell, Erik, Seltmann, Katja C., Sharkey, Michael J., Smith, Aaron D., Smith, Barry, Specht, Chelsea D., Squires, R. Burke, Thacker, Robert W., Thessen, Anne, Fernandez-Triana, Jose, Vihinen, Mauno, Vize, Peter D., Vogt, Lars, Wall, Christine E., Walls, Ramona L., Westerfeld, Monte, Wharton, Robert A., Wirkner, Christian S., Woolley, James B., Yoder, Matthew J., Zorn, Aaron M., and Mabee, Paula
Abstract:: Despite a large and multifaceted effort to understand the vast landscape of phenotypic data, their current form inhibits productive data analysis. The lack of a community-wide, consensus-based, human- and machine-interpretable language for describing phenotypes and their genomic and environmental contexts is perhaps the most pressing scientific bottleneck to integration across...
Resource Type:: Article
Full Text:: , Judith A. Blake9, J. Gordon Burleigh10, Bruno Chanet11, Laurel D. Cooper12, Mélanie Courtot13, Sándor

Comparative Genomics of a Plant-Pathogenic Fungus, Pyrenophora tritici-repentis, Reveals Transduplication and the Impact of Repeat Elements on Pathogenicity and Population Divergence

Creator:: Manning, Viola A., Pandelova, Iovanna, Dhillon, Braham, Wilhelm, Larry J., Goodwin, Stephen B., Berlin, Aaron M., Figueroa, Melania, Freitag, Michael, Hane, James K., Henrissat, Bernard, Holman, Wade H., Kodira, Chinnappa D., Martin, Joel, Oliver, Richard P., Robbertse, Barbara, Schackwitz, Wendy, Schwartz, David C., Spatafora, Joseph W., Turgeon, B. Gillian, Yandava, Chandri, Young, Sarah, Zhou, Shiguo, Zeng, Qiandong, Grigoriev, Igor V., Ma, Li-Jun, and Ciuffetti, Lynda M.
Abstract:: Pyrenophora tritici-repentis is a necrotrophic fungus causal to the disease tan spot of wheat, whose contribution to crop loss has increased significantly during the last few decades. Pathogenicity by this fungus is attributed to the production of host-selective toxins ( HST), which are recognized by their host in a genotype-specific...
Resource Type:: Article
Full Text:: ,‡‡,§§ James K. Hane,*** Bernard Henrissat,††† Wade H. Holman,* Chinnappa D. Kodira,**,‡‡‡ Joel Martin

Taxonomic Clarification of Lupinus oreganus and Lupinus biddlei in the Pacific Northwest, USA

Creator:: Severns, Paul M., Meyers, Stephen C., and Tran, Tri
Abstract:: Through a phylogenetic study Using LECCYCIA nucleotide sequences and a survey of historical Botanical literature, we propose clarifications in the nomenclature of Lupinus oreganus and Lupinus biddlei. The former taxon has been incorrectly classified as Lupinus sulphurcus ssp. kincaidii and recently as L. oreganus var. kincaidii. The latter has recently...
Resource Type:: Article
Full Text:: clade of Leguminosae subfam. Papilionideae. Edinburgh Journal of Botany 62:119–126. CITERNE, H.L., D

Genetic diversity of thiamine and folate in primitive cultivated and wild potato (Solanum) species

Creator:: Goyer, Aymeric and Sweek, Kortney
Abstract:: Biofortification of staple crops like potato via breeding is an attractive strategy to reduce human micronutrient deficiencies. A prerequisite is metabolic phenotyping of genetically diverse material which can potentially be used as parents in breeding programs. Thus, the natural genetic diversity of thiamine and folate contents was investigated in indigenous...
Resource Type:: Article
Full Text:: , Merchant, S. S.; Briggs, W. R.; Ort, D., Eds. Annual 253 Reviews: Palo Alto, 2011; Vol. 62, pp 105-125

Priming potato with thiamin to control potato virus Y

Creator:: Vinchesi, Amber C., Rondon, Silvia I., and Goyer, Aymeric
Abstract:: Potato virus Y (PVY) is a major potato pathogen affecting potato yields worldwide. Thiamin, a water-soluble B vitamin (vitamin B1) has been shown to boost the plant’s immunity, thereby increasing resistance against pathogens. In this study, we tested different concentrations of thiamin (1 mM, 10 mM, 50 mM, 100 mM)...
Resource Type:: Article
Full Text:: . Baltenweck-Guyot, D. Steyer, C. 324 Marcic, A. Mliki and I. Soustre-Gacougnolle. 2013. Thiamine modulates

Genetic Diversity of Thiamin and Folate in Primitive Cultivated and Wild Potato (Solanum) Species

Creator:: Goyer, Aymeric and Sweek, Kortney
Abstract:: Biofortification of staple crops like potato via breeding is an attractive strategy to reduce human micronutrient deficiencies. A prerequisite is metabolic phenotyping of genetically diverse material which can potentially be used as parents in breeding programs. Thus, the natural genetic diversity of thiamin and folate contents was investigated in indigenous...
Resource Type:: Article
Full Text:: . S., Briggs, W. R., Ort, D., Eds.; Annual Reviews: Palo Alto, 2011; Vol. 62, pp 105�125. (7

StPIP1, a PAMP-induced peptide in potato, elicits plant defenses and is associated with disease symptom severity in a compatible interaction with potato virus Y

Creator:: Combest, Max M., Moroz, Natalia, Tanaka, Kiwamu, Rogan, Conner J., Anderson, Jeffrey C., Thura, Lin, Rakotondrafara, Aurélie M., and Goyer, Aymeric
Abstract:: The role of small secreted peptides in plant defense responses to viruses has been seldom investigated. Here, we report a role for potato (Solanum tuberosum) PIP1, a gene predicted to encode a member of the PAMP-induced peptide (PIP) family, in the response of potato to potato virus Y infection (PVY)....
Resource Type:: Article
Full Text:: the 274-bp fragment d was amplified 212 using fragment c as template and using the following forward

ScholarsArchive@OSU

Evolution and ecology of the Ceanothus-Frankia symbiosis

The glutamine synthetases in soybean root nodules and free-living Rhizobium japonicum

Pyrenophora tritici-repentis : investigation of factors that contribute to pathogenicity

Finding Our Way through Phenotypes

Comparative Genomics of a Plant-Pathogenic Fungus, Pyrenophora tritici-repentis, Reveals Transduplication and the Impact of Repeat Elements on Pathogenicity and Population Divergence

Taxonomic Clarification of Lupinus oreganus and Lupinus biddlei in the Pacific Northwest, USA

Genetic diversity of thiamine and folate in primitive cultivated and wild potato (Solanum) species

Priming potato with thiamin to control potato virus Y

Genetic Diversity of Thiamin and Folate in Primitive Cultivated and Wild Potato (Solanum) Species

StPIP1, a PAMP-induced peptide in potato, elicits plant defenses and is associated with disease symptom severity in a compatible interaction with potato virus Y

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