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Creator:: DeGiorgio, Michael, Syring, John, Eckert, Andrew J., Liston, Aaron, Cronn, Richard, Neale, David B., and Rosenberg, Noah A.
Abstract:: BACKGROUND: As it becomes increasingly possible to obtain DNA sequences of orthologous genes from diverse sets of taxa, species trees are frequently being inferred from multilocus data. However, the behavior of many methods for performing this inference has remained largely unexplored. Some methods have been proven to be consistent given...

Creator:: DeGiorgio, Michael, Syring, John, Eckert, Andrew J., Liston, Aaron, Cronn, Richard, Neale, David B., and Rosenberg, Noah A.
Abstract:: BACKGROUND: As it becomes increasingly possible to obtain DNA sequences of orthologous genes from diverse sets of taxa, species trees are frequently being inferred from multilocus data. However, the behavior of many methods for performing this inference has remained largely unexplored. Some methods have been proven to be consistent given...

Creator:: Cronn, Richard, Knaus, Brian J., Liston, Aaron, Maughan, Peter J., Parks, Matthew, Syring, John V., and Udall, Joshua
Abstract:: • Premise of the study: The dramatic advances offered by modern DNA sequencers continue to redefine the limits of what can be accomplished in comparative plant biology. Even with recent achievements, however, plant genomes present obstacles that can make it difficult to execute large-scale population and phylogenetic studies on next-generation...

Creator:: Cronn, Richard, Knaus, Brian J., Liston, Aaron, Maughan, Peter J., Parks, Matthew, Syring, John V., and Udall, Joshua
Abstract:: • Premise of the study: The dramatic advances offered by modern DNA sequencers continue to redefine the limits of what can be accomplished in comparative plant biology. Even with recent achievements, however, plant genomes present obstacles that can make it difficult to execute large-scale population and phylogenetic studies on next-generation...

Creator:: Cronn, Richard, Knaus, Brian J., Liston, Aaron, Maughan, Peter J., Parks, Matthew, Syring, John V., and Udall, Joshua
Abstract:: • Premise of the study: The dramatic advances offered by modern DNA sequencers continue to redefine the limits of what can be accomplished in comparative plant biology. Even with recent achievements, however, plant genomes present obstacles that can make it difficult to execute large-scale population and phylogenetic studies on next-generation...

Creator:: Cronn, Richard, Knaus, Brian J., Liston, Aaron, Maughan, Peter J., Parks, Matthew, Syring, John V., and Udall, Joshua
Abstract:: • Premise of the study: The dramatic advances offered by modern DNA sequencers continue to redefine the limits of what can be accomplished in comparative plant biology. Even with recent achievements, however, plant genomes present obstacles that can make it difficult to execute large-scale population and phylogenetic studies on next-generation...

Creator:: Liston, Aaron, Cronn, Richard, and Ashman, Tia-Lynn
Abstract:: The cultivated strawberry, Fragaria Xananassa, is one of the youngest domesticated plants. Its 18th century origin via hybridization in Europe between the North American F. virginiana and the South American F. chiloensis was documented by the botanist Antoine Nicolas Duchesne. His 1766 “Natural History of Strawberries” is an extraordinary work...
Resource Type:: Article

Creator:: DeGiorgio, Michael, Syring, John, Eckert, Andrew J., Liston, Aaron, Cronn, Richard, Neale, David B., and Rosenberg, Noah A.
Abstract:: BACKGROUND: As it becomes increasingly possible to obtain DNA sequences of orthologous genes from diverse sets of taxa, species trees are frequently being inferred from multilocus data. However, the behavior of many methods for performing this inference has remained largely unexplored. Some methods have been proven to be consistent given...
Resource Type:: Article

Creator:: Njuguna, Wambui, Liston, Aaron, Cronn, Richard, Ashman, Tia-Lynn, and Bassil, Nahla
Abstract:: The cultivated strawberry is one of the youngest domesticated plants, developed in France in the 1700s from chance hybridization between two western hemisphere octoploid species. However, little is known about the evolution of the species that gave rise to this important fruit crop. Phylogenetic analysis of chloroplast genome sequences of...
Resource Type:: Article

Creator:: Parks, Matthew, Cronn, Richard, and Liston, Aaron
Abstract:: Background: Through next-generation sequencing, the amount of sequence data potentially available for phylogenetic analyses has increased exponentially in recent years. Simultaneously, the risk of incorporating ‘noisy’ data with misleading phylogenetic signal has also increased, and may disproportionately influence the topology of weakly supported nodes and lineages featuring rapid radiations and/or...
Resource Type:: Article

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