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- Creator:
- Tiwari, Vijay K., Heesacker, Adam, Riera-Lizarazu, Oscar, Gunn, Hilary, Wang, Shichen, Wang, Yi, Gu, Young Q., Paux, Etienne, Koo, Dal-Hoe, Kumar, Ajay, Luo, Ming-Cheng, Lazo, Gerard, Zemetra, Robert, Akhunov, Eduard, Friebe, Bernd, Poland, Jesse, Gill, Bikram S., Kianian, Shahryar, and Leonard, Jeffrey M.
- Abstract:
- Generating a contiguous, ordered reference sequence of a complex genome such as hexaploid wheat (2n = 6x = 42; approximately 17 GB) is a challenging task due to its large, highly repetitive, and allopolyploid genome. In wheat, ordering of whole-genome or hierarchical shotgun sequencing contigs is primarily based on recombination...
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- Creator:
- Tiwari, Vijay K., Heesacker, Adam, Riera-Lizarazu, Oscar, Gunn, Hilary, Wang, Shichen, Wang, Yi, Gu, Young Q., Paux, Etienne, Koo, Dal-Hoe, Kumar, Ajay, Luo, Ming-Cheng, Lazo, Gerard, Zemetra, Robert, Akhunov, Eduard, Friebe, Bernd, Poland, Jesse, Gill, Bikram S., Kianian, Shahryar, and Leonard, Jeffrey M.
- Abstract:
- Generating a contiguous, ordered reference sequence of a complex genome such as hexaploid wheat (2n = 6x = 42; approximately 17 GB) is a challenging task due to its large, highly repetitive, and allopolyploid genome. In wheat, ordering of whole-genome or hierarchical shotgun sequencing contigs is primarily based on recombination...
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- Creator:
- Tiwari, Vijay K., Heesacker, Adam, Riera-Lizarazu, Oscar, Gunn, Hilary, Wang, Shichen, Wang, Yi, Gu, Young Q., Paux, Etienne, Koo, Dal-Hoe, Kumar, Ajay, Luo, Ming-Cheng, Lazo, Gerard, Zemetra, Robert, Akhunov, Eduard, Friebe, Bernd, Poland, Jesse, Gill, Bikram S., Kianian, Shahryar, and Leonard, Jeffrey M.
- Abstract:
- Generating a contiguous, ordered reference sequence of a complex genome such as hexaploid wheat (2n = 6x = 42; approximately 17 GB) is a challenging task due to its large, highly repetitive, and allopolyploid genome. In wheat, ordering of whole-genome or hierarchical shotgun sequencing contigs is primarily based on recombination...
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- Creator:
- Tiwari, Vijay K., Heesacker, Adam, Riera-Lizarazu, Oscar, Gunn, Hilary, Wang, Shichen, Wang, Yi, Gu, Young Q., Paux, Etienne, Koo, Dal-Hoe, Kumar, Ajay, Luo, Ming-Cheng, Lazo, Gerard, Zemetra, Robert, Akhunov, Eduard, Friebe, Bernd, Poland, Jesse, Gill, Bikram S., Kianian, Shahryar, and Leonard, Jeffrey M.
- Abstract:
- Generating a contiguous, ordered reference sequence of a complex genome such as hexaploid wheat (2n = 6x = 42; approximately 17 GB) is a challenging task due to its large, highly repetitive, and allopolyploid genome. In wheat, ordering of whole-genome or hierarchical shotgun sequencing contigs is primarily based on recombination...
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- Creator:
- Tiwari, Vijay K., Heesacker, Adam, Riera-Lizarazu, Oscar, Gunn, Hilary, Wang, Shichen, Wang, Yi, Gu, Young Q., Paux, Etienne, Koo, Dal-Hoe, Kumar, Ajay, Luo, Ming-Cheng, Lazo, Gerard, Zemetra, Robert, Akhunov, Eduard, Friebe, Bernd, Poland, Jesse, Gill, Bikram S., Kianian, Shahryar, and Leonard, Jeffrey M.
- Abstract:
- Generating a contiguous, ordered reference sequence of a complex genome such as hexaploid wheat (2n = 6x = 42; approximately 17 GB) is a challenging task due to its large, highly repetitive, and allopolyploid genome. In wheat, ordering of whole-genome or hierarchical shotgun sequencing contigs is primarily based on recombination...
-
- Creator:
- Tiwari, Vijay K., Heesacker, Adam, Riera-Lizarazu, Oscar, Gunn, Hilary, Wang, Shichen, Wang, Yi, Gu, Young Q., Paux, Etienne, Koo, Dal-Hoe, Kumar, Ajay, Luo, Ming-Cheng, Lazo, Gerard, Zemetra, Robert, Akhunov, Eduard, Friebe, Bernd, Poland, Jesse, Gill, Bikram S., Kianian, Shahryar, and Leonard, Jeffrey M.
- Abstract:
- Generating a contiguous, ordered reference sequence of a complex genome such as hexaploid wheat (2n = 6x = 42; approximately 17 GB) is a challenging task due to its large, highly repetitive, and allopolyploid genome. In wheat, ordering of whole-genome or hierarchical shotgun sequencing contigs is primarily based on recombination...
-
- Creator:
- Tiwari, Vijay K., Heesacker, Adam, Riera-Lizarazu, Oscar, Gunn, Hilary, Wang, Shichen, Wang, Yi, Gu, Young Q., Paux, Etienne, Koo, Dal-Hoe, Kumar, Ajay, Luo, Ming-Cheng, Lazo, Gerard, Zemetra, Robert, Akhunov, Eduard, Friebe, Bernd, Poland, Jesse, Gill, Bikram S., Kianian, Shahryar, and Leonard, Jeffrey M.
- Abstract:
- Generating a contiguous, ordered reference sequence of a complex genome such as hexaploid wheat (2n = 6x = 42; approximately 17 GB) is a challenging task due to its large, highly repetitive, and allopolyploid genome. In wheat, ordering of whole-genome or hierarchical shotgun sequencing contigs is primarily based on recombination...
-
- Creator:
- Tiwari, Vijay K., Heesacker, Adam, Riera-Lizarazu, Oscar, Gunn, Hilary, Wang, Shichen, Wang, Yi, Gu, Young Q., Paux, Etienne, Koo, Dal-Hoe, Kumar, Ajay, Luo, Ming-Cheng, Lazo, Gerard, Zemetra, Robert, Akhunov, Eduard, Friebe, Bernd, Poland, Jesse, Gill, Bikram S., Kianian, Shahryar, and Leonard, Jeffrey M.
- Abstract:
- Generating a contiguous, ordered reference sequence of a complex genome such as hexaploid wheat (2n = 6x = 42; approximately 17 GB) is a challenging task due to its large, highly repetitive, and allopolyploid genome. In wheat, ordering of whole-genome or hierarchical shotgun sequencing contigs is primarily based on recombination...
- Resource Type:
- Article
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- Creator:
- Wang, Yi, Drader, Thomas, Tiwari, Vijay K., Dong, Lingli, Kumar, Ajay, Huo, Naxin, Ghavami, Farhad, Iqbal, M. Javed, Lazo, Gerard R., Leonard, Jeff, Gill, Bikram S., Kianian, Shahryar F., Luo, Ming-Cheng, and Gu, Yong Q.
- Abstract:
- Background: Mapping and map-based cloning of genes that control agriculturally and economically important traits remain great challenges for plants with complex highly repetitive genomes such as those within the grass tribe, Triticeae. Mapping limitations in the Triticeae are primarily due to low frequencies of polymorphic gene markers and poor genetic...
- Resource Type:
- Article
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- Creator:
- Kumar, Ajay, Bassi, Filippo M., Paux, Etienne, Al-Azzam, Omar, de Jimenez, Monika Michalak, Denton, Anne M., Gu, Yong Q., Huttner, Eric, Kilian, Andrzej, Kumar, Sachin, Goyal, Aakash, Iqbal, Muhammad J., Tiwari, Vijay K., Dogramaci, Munevver, Balyan, Harindra S., Dhaliwal, Harcharan S., Gupta, Pushpendra K., Randhawa, Gursharn S., Feuillet, Catherine, Pawlowski, Wojciech P., and Kianian, Shahryar F.
- Abstract:
- Background: The uneven distribution of recombination across the length of chromosomes results in inaccurate estimates of genetic to physical distances. In wheat (Triticum aestivum L.) chromosome 3B, it has been estimated that 90% of the cross over events occur in distal sub-telomeric regions representing 40% of the chromosome. Radiation hybrid...
- Resource Type:
- Article