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AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture
- Creator:
- Harper, Lisa, Campbell, Jacqueline, Cannon, Steve, Carson, James, Condon, Bradford, Cooper, Laurel, Dunn, Nathan, Elsik, Christine G., Farmer, Andrew, Ficklin, Stephen P., Grant, David, Grau, Emily, Cannon, Ethalinda K. S., Herndon, Nic, Hu, Zhi-Liang, Humann, Jodi, Jaiswal, Pankaj, Jonquet, Clement, Laporte, Marie-Angelique, Larmande, Pierre, Lazo, Gerard, McCarthy, Fiona, Menda, Naama, Jung, Sook, Mungall, Christopher J., Munoz-Torres, Monica C., Naithani, Sushma, Nelson, Rex, Nesdill, Daureen, Park, Carissa, Reecy, James, Reiser, Leonore, Sanderson, Lacey-Anne, Sen, Taner Z., Poelchau, Monica, Staton, Margaret, Subramaniam, Sabarinath, Tello-Ruiz, Marcela Karey, Unda, Victor, Unni, Deepak, Wang, Liya, Ware, Doreen, Wegrzyn, Jill, Williams, Jason, Woodhouse, Margaret, Walls, Ramona, Yu, Jing, Main, Doreen, Andorf, Carson, Arnaud, Elizabeth, Berardini, Tanya Z., and Birkett, Clayton
- Abstract:
- The future of agricultural research depends on data. The sheer volume of agricultural biological data being produced today makes excellent data management essential. Governmental agencies, publishers and science funders require datamanagement plans for publicly funded research. Furthermore, the value of data increases exponentially when they are properly stored, described, integrated...
- Resource Type:
- Article
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- Creator:
- Tiwari, Vijay K., Heesacker, Adam, Riera-Lizarazu, Oscar, Gunn, Hilary, Wang, Shichen, Wang, Yi, Gu, Young Q., Paux, Etienne, Koo, Dal-Hoe, Kumar, Ajay, Luo, Ming-Cheng, Lazo, Gerard, Zemetra, Robert, Akhunov, Eduard, Friebe, Bernd, Poland, Jesse, Gill, Bikram S., Kianian, Shahryar, and Leonard, Jeffrey M.
- Abstract:
- Generating a contiguous, ordered reference sequence of a complex genome such as hexaploid wheat (2n = 6x = 42; approximately 17 GB) is a challenging task due to its large, highly repetitive, and allopolyploid genome. In wheat, ordering of whole-genome or hierarchical shotgun sequencing contigs is primarily based on recombination...
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- Creator:
- Tiwari, Vijay K., Heesacker, Adam, Riera-Lizarazu, Oscar, Gunn, Hilary, Wang, Shichen, Wang, Yi, Gu, Young Q., Paux, Etienne, Koo, Dal-Hoe, Kumar, Ajay, Luo, Ming-Cheng, Lazo, Gerard, Zemetra, Robert, Akhunov, Eduard, Friebe, Bernd, Poland, Jesse, Gill, Bikram S., Kianian, Shahryar, and Leonard, Jeffrey M.
- Abstract:
- Generating a contiguous, ordered reference sequence of a complex genome such as hexaploid wheat (2n = 6x = 42; approximately 17 GB) is a challenging task due to its large, highly repetitive, and allopolyploid genome. In wheat, ordering of whole-genome or hierarchical shotgun sequencing contigs is primarily based on recombination...
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- Creator:
- Tiwari, Vijay K., Heesacker, Adam, Riera-Lizarazu, Oscar, Gunn, Hilary, Wang, Shichen, Wang, Yi, Gu, Young Q., Paux, Etienne, Koo, Dal-Hoe, Kumar, Ajay, Luo, Ming-Cheng, Lazo, Gerard, Zemetra, Robert, Akhunov, Eduard, Friebe, Bernd, Poland, Jesse, Gill, Bikram S., Kianian, Shahryar, and Leonard, Jeffrey M.
- Abstract:
- Generating a contiguous, ordered reference sequence of a complex genome such as hexaploid wheat (2n = 6x = 42; approximately 17 GB) is a challenging task due to its large, highly repetitive, and allopolyploid genome. In wheat, ordering of whole-genome or hierarchical shotgun sequencing contigs is primarily based on recombination...
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- Creator:
- Tiwari, Vijay K., Heesacker, Adam, Riera-Lizarazu, Oscar, Gunn, Hilary, Wang, Shichen, Wang, Yi, Gu, Young Q., Paux, Etienne, Koo, Dal-Hoe, Kumar, Ajay, Luo, Ming-Cheng, Lazo, Gerard, Zemetra, Robert, Akhunov, Eduard, Friebe, Bernd, Poland, Jesse, Gill, Bikram S., Kianian, Shahryar, and Leonard, Jeffrey M.
- Abstract:
- Generating a contiguous, ordered reference sequence of a complex genome such as hexaploid wheat (2n = 6x = 42; approximately 17 GB) is a challenging task due to its large, highly repetitive, and allopolyploid genome. In wheat, ordering of whole-genome or hierarchical shotgun sequencing contigs is primarily based on recombination...
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- Creator:
- Tiwari, Vijay K., Heesacker, Adam, Riera-Lizarazu, Oscar, Gunn, Hilary, Wang, Shichen, Wang, Yi, Gu, Young Q., Paux, Etienne, Koo, Dal-Hoe, Kumar, Ajay, Luo, Ming-Cheng, Lazo, Gerard, Zemetra, Robert, Akhunov, Eduard, Friebe, Bernd, Poland, Jesse, Gill, Bikram S., Kianian, Shahryar, and Leonard, Jeffrey M.
- Abstract:
- Generating a contiguous, ordered reference sequence of a complex genome such as hexaploid wheat (2n = 6x = 42; approximately 17 GB) is a challenging task due to its large, highly repetitive, and allopolyploid genome. In wheat, ordering of whole-genome or hierarchical shotgun sequencing contigs is primarily based on recombination...
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- Creator:
- Tiwari, Vijay K., Heesacker, Adam, Riera-Lizarazu, Oscar, Gunn, Hilary, Wang, Shichen, Wang, Yi, Gu, Young Q., Paux, Etienne, Koo, Dal-Hoe, Kumar, Ajay, Luo, Ming-Cheng, Lazo, Gerard, Zemetra, Robert, Akhunov, Eduard, Friebe, Bernd, Poland, Jesse, Gill, Bikram S., Kianian, Shahryar, and Leonard, Jeffrey M.
- Abstract:
- Generating a contiguous, ordered reference sequence of a complex genome such as hexaploid wheat (2n = 6x = 42; approximately 17 GB) is a challenging task due to its large, highly repetitive, and allopolyploid genome. In wheat, ordering of whole-genome or hierarchical shotgun sequencing contigs is primarily based on recombination...
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- Creator:
- Tiwari, Vijay K., Heesacker, Adam, Riera-Lizarazu, Oscar, Gunn, Hilary, Wang, Shichen, Wang, Yi, Gu, Young Q., Paux, Etienne, Koo, Dal-Hoe, Kumar, Ajay, Luo, Ming-Cheng, Lazo, Gerard, Zemetra, Robert, Akhunov, Eduard, Friebe, Bernd, Poland, Jesse, Gill, Bikram S., Kianian, Shahryar, and Leonard, Jeffrey M.
- Abstract:
- Generating a contiguous, ordered reference sequence of a complex genome such as hexaploid wheat (2n = 6x = 42; approximately 17 GB) is a challenging task due to its large, highly repetitive, and allopolyploid genome. In wheat, ordering of whole-genome or hierarchical shotgun sequencing contigs is primarily based on recombination...
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- Creator:
- Tiwari, Vijay K., Heesacker, Adam, Riera-Lizarazu, Oscar, Gunn, Hilary, Wang, Shichen, Wang, Yi, Gu, Young Q., Paux, Etienne, Koo, Dal-Hoe, Kumar, Ajay, Luo, Ming-Cheng, Lazo, Gerard, Zemetra, Robert, Akhunov, Eduard, Friebe, Bernd, Poland, Jesse, Gill, Bikram S., Kianian, Shahryar, and Leonard, Jeffrey M.
- Abstract:
- Generating a contiguous, ordered reference sequence of a complex genome such as hexaploid wheat (2n = 6x = 42; approximately 17 GB) is a challenging task due to its large, highly repetitive, and allopolyploid genome. In wheat, ordering of whole-genome or hierarchical shotgun sequencing contigs is primarily based on recombination...
- Resource Type:
- Article