"Several species of rockfish inhabit the nearshore ocean off Oregon and contribute significantly to the recreational fishery with black rockfish (Sebastes melanops) being most important. Nearshore rockfish populations are coming under increased fishing pressure with relatively little assessment due to the difficulty and expense of such an undertaking. The need...
Efforts to restore depressed populations of Pacific salmon Oncorhynchus spp. are often hampered by the inability to assign population identity to individuals in an admixture. This knowledge is of particular concern in supportive breeding programs, in which misidentification of individuals to population may result in progeny of mixed heritage, which,...
The American Fisheries Society (AFS) recognizes the need for conservative and robust management of Pacific rockfishes because of naturally low population growth, the overfished state of many of the stocks, and complex nature of the mixed-stock fisheries (60-plus species). The AFS recommends that catch information be collected on a species-specific...
Geotechnical Resources, Rnc. (GRI) conducted a geotechnical investigation for the proposed National Oceanic and Atmospheric Administration (NOAA) Building at Oregon State University's Hatfield Marine Science Center (HMSC) on Yaquina Bay in Newport, Oregon. The NOAA site is located in the northeast portion of the HMSC campus on the South Beach...
The opportunities for expanding water supplies in Oregon coastal municipalities are becoming increasingly limited. New water quantity and quality regulations, particularly those designed to protect and rebuild salmon runs, constrain water supply options. At the same time, however, demand for water is increasing. Coastal communities continue to grow in population...
The problem of extinction in the sea has been recognized
only recently by the scientific community (Roberts and
Hawkins 1999). For the last decade, the American Fisheries
Society (AFS) has pursued an initiative to identify marine
fish stocks that may be at risk of extinction in North America
(Musick 1998;...
Continued stock declines in marine fisheries have resulted in a search for more risk-averse management approaches. In response, the Sustainable Fisheries Act of 1996 mandates habitat protection, bs catch reduction, and stock rebuilding. These changes emphasize precaution, and imply a shift in focus from maximizing yields to minimizing ecological impacts...
"The MSC was created through the impetus of three needs. Wayne Burt of the newly formed Oceanography Department needed dock and ship support facilities for his NSF-funded research vessel on the coast. Roland Dimick of the Fisheries and Wildlife Department needed to expand his small bay research lab located at...
Larval and age-0 sablefish Anoplopoma fimbria reside in neustonic waters of the North Pacific during spring and summer. We estimated the potential impacts of elevated surface temperatures on ecological processes of growth, conversion efficiency, and behavior in early juvenile sablefish. Growth experiments tested a wide range of temperatures from 6...
Saltwater-adapted juvenile chinook salmon Oncorhynchus tshawytscha exposed to aromatic and chlorinated compounds, representative of contaminants found in urban estuaries in Puget Sound, have a higher susceptibility to vibriosis than do fish exposed only to the solvent vehicle. Susceptibility to vibriosis was assessed by examining the percent cumulative mortality of the...
There are several assumptions regarding the behavior and motivations of participants in fishery management that may hinder the effectiveness of the management process. In this research, we examine whether the commercial fishing industry is a homogeneous group whose decision-making is dominated by short-term economic considerations to the detriment of long-term...
The extent of stress and eventual mortality in Pacific halibut Hippoglossus stenolepis that resulted from simulated capture by hooking or towing in a net, followed by abrupt exposure to warmer seawater temperature and air, were determined under laboratory conditions. Abrupt exposure to 16degreesC seawater and air after either method of...
In the face of dramatic declines in groundfish populations and a lack of sufficient stock assessment information, a need has arisen for new methods of assessing groundfish populations. We describe the integration of seafloor transect data gathered by a manned submersible with high-resolution sonar imagery to produce a habitat- based...
There has been a dramatic increase in jellyfish biomass over the eastern Bering Sea shelf since the early 1990s, which was previously hypothesized to have been triggered by changing climate and ocean conditions. We examine the hypothesis that the presence of these large carnivores has affected fisheries resources, either through...
The effects of anomalous oceanographic conditions on growth, abundance, spawn-date distributions, and diet of early-juvenile Pacific hake Merluccius productus were examined in nursery grounds off the coast of central California, USA. Spring collections from 2 consecutive years of El Nino conditions, 1997 and 1998, 1 year of La Nina conditions,...
The mortality of discarded bycatch is a critical problem in the management of fisheries worldwide. Little is known about the key principles involved in the mortality of discarded bycatch. These principles are best elaborated under controlled conditions in the laboratory where the actions and interactions of stressors found in fishing...
Previous studies have shown that juvenile chinook salmon Oncorhynchus tshawytscha exposed in the field or the laboratory to polychlorinated biphenyls (PCBs), an anthropogenic stressor, are immunosuppressed. It is not known whether simultaneous exposure to natural stressors can increase this immunosuppression. To examine the effects of natural and anthropogenic stressors on...
During the summer of 1994, 1996, and 1997, we conducted hydrographic and plankton surveys of the upper 70 m in the nearshore, the continental shelf, and off shelf oceanic waters off Oregon, USA. Copepod densities and biomass were estimated along 4 transects from each cruise. The on shelf copepod biomass...
The lingcod Ophiodon elongatus is a benthic marine fish commonly caught by groundfish trawlers and discarded due to low catch limits. Managers must account for the mortality of bycatch to assess population status accurately. Our objectives were to estimate the actual mortality of trawl-discarded lingcod (50- 84 cm) and describe...
Changes in the spatial distribution of U.S. west coast bottom-trawl effort in relation
to areas of prime habitat for rockfish Sebastes spp. were evaluated between 1992 and 2001. Prime trawlable rockfish habitat (PTRH) was defined based on the spatial distribution of high rockfish catches from logbook data for 1992–1995. Bottom-trawl...
Tag and recovery programs can provide valuable information on population size and exploitation rates in fishes. Passive integrated transponder (PIT) tags are ideal for use in such programs because they provide identification of individual fish and are invisible to anglers, circumventing problems with nonreporting of tags. Our objective was to...
Simultaneous visual and oceanographic surveys were conducted in the lower Bay of Fundy and in Roseway Basin of the SW Scotian Shelf during the summers of 1999 to 2001 to investigate the physical and biological oceanographic factors associated with North Atlantic right whale occurrence. Sightings of right whales were recorded...
North Atlantic right whales were instrumented with suction-cup mounted, time-depth recorders (TDR) during the summers of 2000 and 2001 to examine their diving and foraging behavior. Simultaneous observations of temperature, salinity and the vertical distribution of their principal prey, Calanus finmarchicus stage 5 copepodites (C5), were obtained alon
g each...
Fisheries models often assume that discarded undersized fish and target species will survive and contribute to future recruitment and yield. If smaller fish are more susceptible to capture stressors than larger fish, then the assumption that smaller discards would contribute to recruitment may not be true. We tested the hypothesis...
Assessments for many U.S. Pacific coast groundfish stocks have been developed using the statistical catch-at-age method known as Stock Synthesis. This study used Monte Carlo simulation and a fractional factorial experiment to evaluate the effects of input data errors and stock characteristics on bias and precision in estimates of ending...
Although the adverse impact of pathogens on salmon populations in the Pacific Northwest is often discussed and recognized, little is currently known regarding the incidence and corresponding significance of delayed disease-induced mortalities. In the study reported herein, we surveyed the presence and prevalence of selected micro- and macroparasites in out-migrant...
"Erosion is impacting a portion of the Estuary Nature Trail located adjacent to Oregon State University's Hatfield Marine Science Center (HMSC) facility, located on the south side of the Yaquina Bay estuary approximately one mile from the open waters of the Pacific Ocean. The HMSC Estuary Nature Trail is important...
Describing the ocean habitats used by Chinook salmon Oncorhynchus tshawytscha is an important step towards understanding how environmental conditions influence their population dynamics. We used data from archival tags that recorded time, temperature and pressure (depth) to define the coastal habitats used by Chinook near Oregon and California during the...
This is a summary report of preliminary recommendations for the Oregon State
University: Hatfield Marine Science Center, located in Newport, Lincoln County, Oregon
as this institution prepares to embark on the development of an earthquake and tsunami
pre-disaster mitigation plan. This report describes our preliminary recommendations,
lessons from the past,...
This is a summary report of preliminary recommendations for the Oregon State
University: Hatfield Marine Science Center, located in Newport, Lincoln County, Oregon
as this institution prepares to embark on the development of an earthquake and tsunami pre-disaster mitigation plan. This report describes our preliminary recommendations, lessons from the past,...
We tested the potential of a selective flatfish trawl to reduce bycatch of slope rockfish in the upper continental slope bottom-trawl fishery (250–500 m) on the U.S. West Coast. The trawl we tested differed from typical slope trawls in that it was a low-rise, two-seam trawl with a severely cut...
Erosion is impacting a portion of the Estuary Nature Trail located adjacent to Oregon State University’s Hatfield Marine Science Center (HMSC) facility, located on the south side of the Yaquina Bay estuary approximately one mile from the open waters of the Pacific Ocean. The HMSC Estuary Nature Trail is important...
If the success of the Endangered Species Act (ESA) is measured by the number of endangered species that have been recovered and delisted, then the act is not very successful. Only 15 species have been delisted because of recovery in the history of the ESA. The Borax Lake chub (Gila...
Unusual collections of several euphausiid, chaetognath, and copepod species help elucidate
the effects of the strong 1997/1998 El Niño off the central Oregon, USA, coast. Furcilia of Nyctiphanes simplex, a euphausiid typically found only as far north as central California, were collected in bi-weekly nearshore samples between December 1997 and...
Age-1 and age-2 Pacific halibut Hippoglossus stenolepis were exposed to a range of times in air (0-60 min) and air temperatures (10 degrees C or 16 degrees C) that simulated conditions on deck after capture to test for correspondence among responses in plasma constituents and mortality. Pacific halibut mortality generally...
The Moult Rate (MR) method has been used widely to derive stage-specific growth rates in juvenile copepods. It is the most common field-based method. Unfortunately, the equation underlying the method is wrong and, consequently, large errors in juvenile growth rate estimates are widespread. The equation derives growth from the mean...
Dramatic changes in the physical and biological conditions off Washington and Oregon, USA, have occurred since 1998, including extreme El Niño (warm) and La Niña (cool) years, high and low Columbia River flow years, a major intrusion of subarctic water, and a low oxygen event on the shelf. The occurrence...
Well-defined fronts develop at the seaward edge of riverine plumes where suspended materials and planktonic organisms are concentrated by convergent water flows. Riverine plume fronts have been hypothesized to be favorable fish habitats because they can lead to localized prey
aggregations. We examined the spatial distribution of juvenile Pacific salmonids...
The purpose of this book is to provide you with a bit more information about the organisms maintained at the ASLC so that you may deepen your understanding and appreciation of them. However, as a prelude to the more species-specific information contained in this document, there are three short chapters...
The sablefish Anoplopoma fimbria is a valuable North Pacific Ocean species that, when not targeted in various commercial fisheries, is often a part of discarded bycatch. Predictions of the survival of discarded fish are dependent on understanding how a fish responds to stressful conditions. Our objective was to describe the...
Recognizing the need, opportunity, and potential for collaboration between the Hatfield Marine Science Visitor Center, Oregon Sea Grant’s Youth Marine Education and Ornamental Fish Health Programs, Oregon Coast Community College Aquarium Science Program, and the Oregon Coast Aquarium, Oregon Sea Grant convened a workgroup and funded this conceptual planning study...
A recent trend of enhancing freshwater emergent wetlands for waterfowl and other wildlife has raised concern about the effects of such measures on juvenile salmonids. We undertook this study to quantify the degree and extent of juvenile Pacific salmon Oncorhynchus spp. utilization of enhanced and unenhanced emergent wetlands within the...
Gravid adult female Euphausia pacifica were collected off Newport, Oregon, USA and transferred to the laboratory, where females spawned eggs, eggs hatched, and larvae were reared at 10.5 degrees C. We fed 4 cohorts of larvae to excess with a combination of phytoplankton species and monitored them daily until they...
The species composition, distribution and concentration of ichthyoplankton off the central Oregon coast in the NE Pacific Ocean were examined during 2000 and 2002 to investigate annual, seasonal, vertical, and cross-shelf variability. Larval concentrations were also analyzed in relation to water temperature and salinity. The 281 samples collected from 5...
The goal of this study was to describe the duration and magnitude of the physiological stress response in lingcod Ophiodon elongatus after exposure to brief handling and sublethal air stressors. The response to these stressors was determined during a 24‐h recovery period by measuring concentrations of plasma cortisol, lactate, glucose,...
Fishes with closed swim bladders regulate buoyancy during depth changes by secreting and
resorbing swim bladder gases. Forced ascent during fishery capture results in barotrauma caused by rapid expansion and exsolution of gases from body fluids. Pressure changes in hyperbaric chambers were used to examine changes in swim bladder integrity...
We compared brood sizes among adult female Euphausia pacifica Hansen, 1911 from 3
populations in the North Pacific: Puget Sound, Washington, USA; Toyama Bay, Japan; and the Oregon coast, USA. Additionally, we used multiple linear regression models to compare the interspecific brood size as a function of female length and...
The purpose of this report is to document the depth and breadth of research, education, and outreach activities in coastal and ocean sciences at Oregon State University. The scale and diversity of those activities are not well known outside of OSU, and in fact they are significantly underestimated, even by...
Like the OSU administration and many other units of the university, the Hatfield Marine
Science Center has been engaged in developing a strategic plan to envision its future. This
document reflects the contributions of a diverse group of stakeholders, representing
various academic and research interests on OSU’s main campus, HMSC’s...
Requirements are growing for peer review of the science used for governmental management decisions. This is particularly true for fisheries science, where management decisions are often controversial. The National Oceanic and Atmospheric Administration's National Marine Fisheries Service instituted the Center for Independent Experts (CIE) in 1998 as a national peer-review...
We evaluated the effect of barotrauma on the behavior of nine species of Pacific rockfish Sebastes spp. after hook-and-line capture and release using a video-equipped underwater release cage. Sampling was conducted across a range of bottom depths (12-194 m), mostly where barotrauma resulting from an expanded swim bladder and gaseous...
Previously published in California Cooperative Oceanic Fisheries Investigations Progress Report, 2007, Vol.48; access courtesy of publisher and authors.
Coastal Pacific hake (Merluccius productus) are known
to spawn in the southern California Bight from January
to March, migrate north during late spring and summer
to feed off Oregon, Washington, and British Columbia,
and then move back to southern California in the fall.
Juvenile Pacific hake nursery areas have been...
A trophic model that simulates interactions between
a predatory fish (Pacific hake, Merluccius productus), forage
fish, and juvenile salmon off the Columbia River
was constructed to identify if trophic interactions could
account for marine mortality of Columbia River juvenile
salmon. The model estimates the number of juvenile
salmon that are...
The absence of a direct, long-term measure of individual Steller sea lion survival led to the development of implanted, delayed transmission satellite tags specifically for this species (Life History Transmitter, LHX). To assess possible effects of implant procedures and LHX tags, we undertook a two-stage approach to monitor: 1) immediate...
Estimating the stock proportions of mixed-stock fishery samples by means of genetic stock identification has played an important role in the management of salmon fisheries. In addition, stock identification of individual fish has applications for population studies, forensic cases, and management issues. We examined 11 microsatellite DNA loci in 84...
Marine and coastal sciences represent a major strength of Oregon State University.
Through a combination of research, education, and outreach, OSU scientists improve the
understanding of our marine and coastal environments and make major contributions to
issues facing society, including climate change, natural resource conservation and
development, and fundamental ocean...
Four students from University Of Oregon’s Department of Landscape Architecture addressed the infrastructure planning needs of the Hatfield Marine Science Center in Newport, Oregon. This 4th Year Studio Project was completed by Amy Hartell, Carl Liebhardt, Leif Zimmerman and Lisa Kroner under the direction of Rene Kane. The students were...
The Amphipoda have been divided into the suborders Gammaridea,
Caprellidea, Cyamidea, Hyperiidea and Ingolfiellidea
(Schram 1986, Crustacea. Oxford University Press, New
York). However, Myers and Lowry (2003) regard the caprellids,
or skeleton shrimps, and the cyamids, or whale lice, as
families Caprellidae and Cyamidae. These distinctive groups
are covered in...
The Oregon State University (OSU) President s Commission on Ocean, Coastal and Earth System Futures was charged by President Edward Ray to explore and identify a far-reaching vision for the future
of OSU as a Land Grant and Sea Grant institution - one that integrates the biological, physical, and social...
The HMSC brought together three dozen scientists, engineers, educators, and facilities managers from throughout the Pacific Northwest for a day-long workshop on May 14, 2007 to assess and prioritize infrastructure improvement needs for seawater pumping and bay/ocean access in support of the HMSC’s research and education mission. Funded by a...
The Marine Resource Program of the Oregon Department of Fish and Wildlife is headquartered in a building at the Hatfield Marine Science Center. Built in 1970 for 30 personnel, it now houses 52. By the end of 2007 the MRP will need space for 82. The purpose of this report...
The purpose of the Hatfield Marine Science Center Master Plan is to provide a plan to guide future development to support the marine science research, education and outreach initiatives through fiscal year 2022.
An international multi-laboratory project was conducted to develop a standardized DNA database for Chinook salmon (Oncorhynchus tshawytscha). This project was in response to the needs of the Chinook Technical Committee of the Pacific Salmon Commission to identify stock composition of Chinook salmon caught in fisheries during their oceanic migrations. Nine...
El ano 2006 representa en dos sentidos una fecha critica para la cuenca del Rio Columbia y para los esfuerzos de recuperacion del salmon y la trucha arcoiris en la region Pacifico Noroeste: el 25 aniversario de la creacion del Consejo para la Conservacion y Poder del Noroeste y el...
Seabirds have often been proposed as environmental indicators. Beached bird data may provide an additional data source and such data is efficacious because it can reliably be collected by volunteers. In addition to anthropogenic factors, such as oil spills, changes in the ocean-atmosphere can affect carcass beaching rate in 3...
This study presents the first target strength measurements of Dosidicus gigas, a large squid that is a key predator, a significant prey, and the target of an important fishery. Target strength of live, tethered squid was related to mantle length with values standardized to the length squared of −62.0, −67.4,...
Predation by piscivorous marine fishes has been hypothesized to be a primary source of marine
mortality for Pacific Northwest juvenile salmon. During the springs and summers of 1998–2004, we collected predator and prey fishes (forage and juvenile salmonids) at the surface at night off the mouth of the Columbia River....
One aspect of diadromy that has received little attention is buoyancy regulation in fish moving between freshwater and marine environments. Because of density differences between the two water types, fish must alter their whole-fish density (WFD) or they will become positively (float) or negatively (sink) buoyant as they change environments....
We evaluated the effect of capture depth and fish size on the ability of several Pacific rockfishes Sebastes spp. to resubmerge after hook-and-line capture and surface release. We observed fish as they were released into a bottomless floating enclosure, and we recorded submergence success within a 5-min time limit. Submergence...
Fluorescein has been used for rapid and sensitive detection of fish skin and corneal ulceration. Effective use of the fluorescein test requires knowledge of conditions that might cause misleading interpretations or otherwise interfere with test reliability. Examination of fish health and the clinical workup often require tricaine as one of...
A critical seasonal event for anadromous Chinook salmon (Oncorhynchus tshawytscha) is the time at which adults migrate from the ocean to breed in freshwater. We investigated whether allelic variation at the circadian rhythm genes, OtsClock1a and OtsClock1b, underlies genetic control of migration timing among 42 populations in North America. We...
Proceedings of a workshop held at the Hatfield Marine Science Center, October 11-12, 2007. Edited by George W. Boehlert, Gregory R. McMurray, and Cathryn E. Tortorici.
Of all Pacific salmonids, Chinook salmon Oncorhynchus tshawytscha display the greatest variability in return times to freshwater. The molecular mechanisms of these differential return times have not been well described. Current methods, such as long serial analysis of gene expression (LongSAGE) and microarrays, allow gene expression to be analyzed for...
YBEF funded and guided this innovative asset-based Strategic Framework to support the Growing Ocean Observing Industry Cluster in Newport and Central Lincoln County. The Framework sets the stage for ocean observing as a long-term economic development strategy for the region. It builds on a host of ocean observing related assets...
Marine protected areas (MPAs), ideally, manage human uses that threaten ecosystems, or components of ecosystems. During several recent MPA designation processes, concerns have arisen over the scientific justification for no-take MPAs, particularly those that restrict recreational fishing for pelagic species. An important question is: under what conditions might recreational pelagic...
CERM Poster 2009.
To determine if diet affects the growth rate of juvenile ling cod, we began with three initial objectives: 1) Record the growth rates of juvenile lingcod on different diets (squid and sardine); 2) Determine if hemocyanin will cause lingcod skin and muscle pigmentation will take on a...
The diel feeding periodicity of juvenile Chinook salmon Oncorhynchus tshawytscha was determined from stomachs collected in coastal waters off Oregon in 2000 and 2003. Juvenile Chinook salmon exhibited a diurnal feeding pattern with morning and evening feeding periods. There were differences in the duration and magnitude of the dawn and...
This report describes how energy is used in at the Hatfield Marine Science Center, and includes recommendations on cost effective steps that could be taken to reduce energy and waste costs. The contents are based on a recent visit to the facilities in Newport, Oregon.
After hatchery-reared salmonids are released into the wild, their survival and performance are
frequently lower than those of wild conspecifics. Additionally, negative effects of hatchery fish on wild fish are cited as factors affecting the recovery of salmonid populations. Alternative hatchery rearing environments and release practices have been proposed to...
To directly determine mortality and predation in the endangered western Steller sea lion Eumetopias jubatus, we deployed implanted, satellite-linked post-mortem data transmitters in 21 juveniles. Data recovered from 4 of 5 detected mortalities exhibited precipitous drops in ambient temperatures followed by immediate onset of transmissions (N = 3), or gradual...
Successfully shifting to a more piscivorous diet may be an important factor in the growth and survival of juvenile coho salmon Oncorhynchus kisutch and Chinook salmon O. tshawytscha during their first summer in the northern California Current. Nonmetric multidimensional scaling and cluster analysis of diets by size showed several distinct...
This summary focuses on prey species, population and fishery information. General texts were not included. Population and fisheries interaction studies are not an exhaustive sampling but are only include as a supplement to prey species information. An attempt is made to put emphasis on more recent studies. This work was...
Each review covers the population, abundance and distribution, food and feeding, habits, reproduction, mortality and economics, anthropogenic interactions and mortality. The review was completed in May 1998 while the author was a student intern.
