Index Catalog // ScholarsArchive@OSU

Generation of full-length cDNA clone and functional analysis of leader proteases of grapevine leafroll-associated virus-2

Creator:: Liu, Yu-Ping
Abstract:: Papain-like leader proteases are found in diverse families of human, animal, plant, and fungal positive-strand RNA viruses. In addition to autocatalytic processing, these proteases play a variety of roles in the virus life cycle. In particular, the leader protease (L-Pro) of a prototype member of the Closterovirus genus, Beet yellows...
Resource Type:: Dissertation
Full Text:: . Valera V. Peremyslov contributed to the design, construction, and sequencing of the full-length cDNA

Genetic requirements for the assembly and cell-to-cell movement of the beet yellows virus

Creator:: Alzhanova, Dina
Abstract:: Beet yellows virus (BYV) is a filamentous, positive-strand RNA virus that belongs to the family Closteroviridae. BYV particles encapsidate a 15.5 kb RNA and posses complex polar architecture. A long virion body is formed by the major capsid protein(CP), whereas the minor capsid protein (CPm) assembles a short tail that...
Resource Type:: Dissertation
Full Text:: Assembly and Cell-to-Cell Movement of the Beet Yellows Virus. Abstract approved: Valerian V. Ja Beet

Multiple functions of a proteinase in closterovirus life cycle

Creator:: Peng, Chih-Wen
Abstract:: More than half of the recognized genera of positive strand RNA viruses employ polyprotein processing as one of the strategies for their genome expression. Normally, this processing is mediated by virus-encoded proteinases that belong to the trypsin-like or papain-like family. In particular, papain-like, leader proteinases were found in diverse families...
Resource Type:: Dissertation
Full Text:: . Dawson. Chapter three was co-authored with Valery V. Peremyslov, Arcady R. Mushegian and William 0

Comparative Genomics of Freshwater Bloom-Forming Cyanobacteria and Associated Organisms

Creator:: Driscoll, Connor B.
Abstract:: The advent of improved DNA sequencing technologies has allowed the analysis of various microbial communities. Bloom-forming freshwater cyanobacteria can produce toxins and taste-and-odor compounds that can negatively affect drinking water supplies. Here, I have employed second- and third-generation sequencing technologies to characterize bloom-forming freshwater cyanobacterial genomes and their associated heterotrophic...
Resource Type:: Dissertation
Full Text:: well [Rodriguez-Valera et al. 2009; Biller et al. 2015]. Since marine cyanophages play an important

Molecular characterization of criniviruses and ilarviruses infecting strawberry

Creator:: Tzanetakis, Ioannis E.
Abstract:: Pallidosis is a disease of strawberry identified in 1957 with an unknown etiology. Two previously uncharacterized viruses in strawberry, Strawberry pallidosis associated virus (SPaV) and Beet pseudo-yellows virus (BPYV), have been found associated with disease symptoms. The complete nucleotide sequence of both viruses was determined and molecular detection protocols developed....
Resource Type:: Dissertation
Full Text:: © Copyright by Ioaimis E. Tzanetakis March 19, 2004 All rights Reserved (V Molecular Characterization of

Transcriptomic analysis using high-throughput sequencing and DNA microarrays

Creator:: Fox, Samuel E.
Abstract:: Transcriptomics and gene expression profiling enables the elucidation of the genetic response of an organism to various environmental cues. Transcriptomics enables the deciphering of differences between two closely related organisms to the same environment and in contrast, enables the elucidation of genetic responses of the same organism to different environmental...
Resource Type:: Dissertation
Full Text:: Appendix IV: Discovery of SNP markers in expressed genes of hazelnut. ..............229 Appendix V

Characterization of pyruvate carboxylase responses to 2,3,7,8-tetrachlorodibenzo-p-dioxin exposure in C57BL/6J male Ah[superscript d/d] mice

Creator:: Ryu, Byung-Woo
Resource Type:: Dissertation
Full Text:: 3.7 S1 nuclease assay experimental design and 1.5 % (w/v) agarose gel analysis 84 3.8 Constructs of

Information-theoretic Approach to Design and Evaluate Privacy-preserving and Fair Frameworks for Continuous High-dimensional Data

Creator:: Alsulaimawi, Zahir Ahmed Hussein
Abstract:: Deep learning is becoming the latest trend in sensitive applications, such as healthcare, criminal justice, and finance. As these new applications emerge, adversaries are circumventing them. Further, there have been concerns about the possibility of bias and discrimination in predictive applications. In order to address these issues, we propose an...
Resource Type:: Dissertation
Full Text:: loss function, whereas the discriminator maximizes it min G max D V (D,G) = Ex∼pdata (x)[logD(x

Cytokinin production by Agrobacterium tumefaciens

Creator:: Kaiss-Chapman, Richard Wilkinson
Abstract:: Certain plant-associated prokaryotes such as Corynebacteriurn fascians and Agrobacterium tumefaciens are known to produce substantial levels of cytokinins. In view of the fragmentary and presumptive evidence available on the quantitative and qualitative levels of cytokinins produced by A. tumefaciens, it was decided to conduct a study of the cytokinins produced...
Resource Type:: Dissertation
Full Text:: . tumefaciens 78 V. DISCUSSION 80 BIBLIOGRAPHY 87 APPENDIX 96 LIST OF TABLES Table Page 1 Occurrence of

Characterizing drivers of microbial community structure and function in diverse marine sediments

Creator:: Graw, Michael F.
Abstract:: Marine sediments are one of the largest habitats for microbial life on earth. These microorganisms play critical roles in biogeochemical cycling both within the subsurface and between the sediment and water columns. However, microbial communities in sediments are highly heterogeneous and the factors defining microbial community structure and metabolic function...
Resource Type:: Dissertation
Full Text:: CJ, Humphrey G, Owens SM, Hampton-Marcell J, Berg-Lyons D, McKenzie V, Fierer N, Fuhrman JA

ScholarsArchive@OSU

Generation of full-length cDNA clone and functional analysis of leader proteases of grapevine leafroll-associated virus-2

Genetic requirements for the assembly and cell-to-cell movement of the beet yellows virus

Multiple functions of a proteinase in closterovirus life cycle

Comparative Genomics of Freshwater Bloom-Forming Cyanobacteria and Associated Organisms

Molecular characterization of criniviruses and ilarviruses infecting strawberry

Transcriptomic analysis using high-throughput sequencing and DNA microarrays

Characterization of pyruvate carboxylase responses to 2,3,7,8-tetrachlorodibenzo-p-dioxin exposure in C57BL/6J male Ah[superscript d/d] mice

Information-theoretic Approach to Design and Evaluate Privacy-preserving and Fair Frameworks for Continuous High-dimensional Data

Cytokinin production by Agrobacterium tumefaciens

Characterizing drivers of microbial community structure and function in diverse marine sediments

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