Index Catalog // ScholarsArchive@OSU

Identification of Genetic Variation between Obligate Plant Pathogens Pseudoperonospora cubensis and P-humuli Using RNA Sequencing and Genotyping-By-Sequencing

Creator:: Summers, Carly F., Gulliford, Colwyn M., Carlson, Craig H., Lillis, Jacquelyn A., Carlson, Maryn O., Cadle-Davidson, Lance, Gent, David H., and Smart, Christine D.
Abstract:: RNA sequencing (RNA-seq) and genotyping-by-sequencing (GBS) were used for single nucleotide polymorphism (SNP) identification from two economically important obligate plant pathogens, Pseudoperonospora cubensis and P. humuli. Twenty isolates of P. cubensis and 19 isolates of P. humuli were genotyped using RNA-seq and GBS. Principle components analysis (PCA) of each data...
Resource Type:: Article
Full Text:: Using RNA Sequencing and Genotyping-By-Sequencing Summers, C. F., Gulliford, C. M., Carlson, C. H

Limitations of Species Delimitation Based on Phylogenetic Analyses: A Case Study in the Hypogymnia hypotrypa Group (Parmeliaceae, Ascomycota)

Creator:: Wei, Xinli, McCune, Bruce, Lumbsch, H. Thorsten, Li, Hui, Leavitt, Steven, Yamamoto, Yoshikazu, Tchabanenko, Svetlana, and Wei, Jiangchun
Abstract:: Delimiting species boundaries among closely related lineages often requires a range of independent data sets and analytical approaches. Similar to other organismal groups, robust species circumscriptions in fungi are increasingly investigated within an empirical framework. Here we attempt to delimit species boundaries in a closely related Glade of lichen-forming fungi...
Resource Type:: Article
Full Text:: hypotrypa Group (Parmeliaceae, Ascomycota) 2 3 Xinli Wei1*, Bruce McCune2, H. Thorsten Lumbsch3, Hui

Potential Therapeutic Competition in Community-Living Older Adults in the U.S.: Use of Medications That May Adversely Affect a Coexisting Condition

Creator:: Lorgunpai, Songprod Jonathan, Grammas, Marianthe, Lee, David S. H., McAvay, Gail, Charpentier, Peter, and Tinetti, Mary E.
Abstract:: OBJECTIVE: The 75% of older adults with multiple chronic conditions are at risk of therapeutic competition (i.e. treatment for one condition may adversely affect a coexisting condition). The objective was to determine the prevalence of potential therapeutic competition in community-living older adults. METHODS: Cross-sectional descriptive study of a representative sample...
Resource Type:: Article
Full Text:: diseases in elderly. Arch Intern Med 162: 2269–2276. 4. Marengoni A, Rizzuto D, Wang H-X, Winblad B

Heterogeneous Occupancy and Density Estimates of the Pathogenic Fungus Batrachochytrium dendrobatidis in Waters of North America

Creator:: Chestnut, Tara, Anderson, Chauncey, Popa, Radu, Blaustein, Andrew R., Voytek, Mary, Olson, Deanna H., and Kirshtein, Julie
Abstract:: Biodiversity losses are occurring worldwide due to a combination of stressors. For example, by one estimate, 40% of amphibian species are vulnerable to extinction, and disease is one threat to amphibian populations. The emerging infectious disease chytridiomycosis, caused by the aquatic fungus Batrachochytrium dendrobatidis (Bd), is a contributor to amphibian...
Resource Type:: Article
Full Text:: Chestnut1,2*, Chauncey Anderson2, Radu Popa3, Andrew R. Blaustein4, Mary Voytek5, Deanna H. Olson6, Julie

Mycobacterium avium Possesses Extracellular DNA that Contributes to Biofilm Formation, Structural Integrity, and Tolerance to Antibiotics

Creator:: Rose, Sasha J., Babrak, Lmar M., and Bermudez, Luiz E.
Abstract:: Mycobacterium avium subsp. hominissuis is an opportunistic pathogen that is associated with biofilm-related infections of the respiratory tract and is difficult to treat. In recent years, extracellular DNA (eDNA) has been found to be a major component of bacterial biofilms, including many pathogens involved in biofilm-associated infections. To date, eDNA...
Resource Type:: Article
Full Text:: -9697 (12)00967-9 [pii] doi: 10.1016/j.scitotenv.2012.07.022 PMID: 22846772. 4. Whiley H, Keegan A

Factors Controlling Soil Microbial Biomass and Bacterial Diversity and Community Composition in a Cold Desert Ecosystem: Role of Geographic Scale

Creator:: Van Horn, David J., Van Horn, M. Lee, Barrett, John E., Gooseff, Michael N., Altrichter, Adam E., Geyer, Kevin M., Zeglin, Lydia H., and Takacs-Vesbach, Cristina D.
Abstract:: Understanding controls over the distribution of soil bacteria is a fundamental Understanding controls over the distribution of soil bacteria is a fundamental step toward describing soil ecosystems, understanding their functional capabilities, and predicting their responses to environmental change. This study investigated the controls on the biomass, species richness, and community...
Resource Type:: Article
Full Text:: , Kevin M. Geyer3, Lydia H. Zeglin5, Cristina D. Takacs-Vesbach1* 1Department of Biology, University of

Sources and Levels of Ambient Ocean Sound near the Antarctic Peninsula

Creator:: Dziak, Robert P., Bohnenstiehl, DelWayne R., Stafford, Kathleen M., Matsumoto, Haruyoshi, Park, Minkyu, Lee, Won Sang, Fowler, Matt J., Lau, Tai-Kwan, Haxel, Joseph H., and Mellinger, David K.
Abstract:: Arrays of hydrophones were deployed within the Bransfield Strait and Scotia Sea (Antarctic Peninsula region) from 2005 to 2009 to record ambient ocean sound at frequencies of up to 125 and 500 Hz. Icequakes, which are broadband, short duration signals derived from fracturing of large free-floating icebergs, are a prominent...
Resource Type:: Article
Full Text:: Peninsula Dziak, R. P., Bohnenstiehl, D. R., Stafford, K. M., Matsumoto, H., Park, M., Lee, W. S

Anti-Hypertensive Medications and Cardiovascular Events in Older Adults with Multiple Chronic Conditions

Creator:: Tinetti, Mary E., Han, Ling, McAvay, Gail J., Lee, David S. H., Peduzzi, Peter, Dodson, John A., Gross, Cary P., Zhou, Bingqing, and Lin, Haiqun
Abstract:: Importance Randomized trials of anti-hypertensive treatment demonstrating reduced risk of cardiovascular events in older adults included participants with less comorbidity than clinical populations. Whether these results generalize to all older adults, most of whom have multiple chronic conditions, is uncertain. Objective To determine the association between anti-hypertensive medications and CV...
Resource Type:: Article
Full Text:: In te n si ty a . F u ll C o h o rt (N = 4 ,9 6 1 ) P ro p e n si ty S co re -M a tc

Mapping Migratory Bird Prevalence Using Remote Sensing Data Fusion

Creator:: Swatantran, Anu, Dubayah, Ralph, Goetz, Scott, Hofton, Michelle, Betts, Matthew G., Sun, Mindy, Simard, Marc, and Holmes, Richard
Abstract:: Background: Improved maps of species distributions are important for effective management of wildlife under increasing anthropogenic pressures. Recent advances in lidar and radar remote sensing have shown considerable potential for mapping forest structure and habitat characteristics across landscapes. However, their relative efficacies and integrated use in habitat mapping remain largely...
Resource Type:: Article
Full Text:: , United States of America, 4 Jet Propulsion Laboratory, California Institute of Technology, Pasadena

Historical Biogeography and Diversification of Truffles in the Tuberaceae and Their Newly Identified Southern Hemisphere Sister Lineage

Creator:: Bonito, Gregory, Smith, Matthew E., Nowak, Michael, Healy, Rosanne A., Guevara, Gonzalo, Cazares, Efren, Kinoshita, Akihiko, Nouhra, Eduardo R., Domınguez, Laura S., Tedersoo, Leho, Murat, Claude, Wang, Yun, Arroyo Moreno, Baldomero, Pfister, Donald H., Nara, Kazuhide, Zambonelli, Alessandra, Trappe, James M., and Vilgalys, Rytas
Abstract:: Truffles have evolved from epigeous (aboveground) ancestors in nearly every major lineage of fleshy fungi. Because accelerated rates of morphological evolution accompany the transition to the truffle form, closely related epigeous ancestors remain unknown for most truffle lineages. This is the case for the quintessential truffle genus Tuber, which includes...
Resource Type:: Article
Full Text:: , Baldomero Arroyo Moreno9, Donald H. Pfister10, Kazuhide Nara11, Alessandra Zambonelli12, James M. Trappe4

ScholarsArchive@OSU

Identification of Genetic Variation between Obligate Plant Pathogens Pseudoperonospora cubensis and P-humuli Using RNA Sequencing and Genotyping-By-Sequencing

Limitations of Species Delimitation Based on Phylogenetic Analyses: A Case Study in the Hypogymnia hypotrypa Group (Parmeliaceae, Ascomycota)

Potential Therapeutic Competition in Community-Living Older Adults in the U.S.: Use of Medications That May Adversely Affect a Coexisting Condition

Heterogeneous Occupancy and Density Estimates of the Pathogenic Fungus Batrachochytrium dendrobatidis in Waters of North America

Mycobacterium avium Possesses Extracellular DNA that Contributes to Biofilm Formation, Structural Integrity, and Tolerance to Antibiotics

Factors Controlling Soil Microbial Biomass and Bacterial Diversity and Community Composition in a Cold Desert Ecosystem: Role of Geographic Scale

Sources and Levels of Ambient Ocean Sound near the Antarctic Peninsula

Anti-Hypertensive Medications and Cardiovascular Events in Older Adults with Multiple Chronic Conditions

Mapping Migratory Bird Prevalence Using Remote Sensing Data Fusion

Historical Biogeography and Diversification of Truffles in the Tuberaceae and Their Newly Identified Southern Hemisphere Sister Lineage

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