Index Catalog // ScholarsArchive@OSU

An update to the Surface Ocean CO₂ Atlas (SOCAT version 2)

Creator:: Bakker, D. C. E., Pfeil, B., Smith, K., Hankin, S., Olsen, A., Alin, S. R., Cosca, C., Harasawa, S., Kozyr, A., Nojiri, Y., O'Brien, K. M., Schuster, U., Telszewski, M., Tilbrook, B., Wada, C., Akl, J., Barbero, L., Bates, N. R., Boutin, J., Bozec, Y., Cai, W.-J., Castle, R. D., Chavez, F. P., Chen, L., Chierici, M., Currie, K., de Baar, H. J. W., Evans, W., Feely, R. A., Fransson, A., Gao, Z., Hales, B., Hardman-Mountford, N. J., Hoppema, M., Huang, W.-J., Hunt, C. W., Huss, B., Ichikawa, T., Johannessen, T., Jones, E. M., Jones, S. D., Jutterström, S., Kitidis, V., Körtzinger, A., Landschützer, P., Lauvset, S. K., Lefèvre, N., Manke, A. B., Mathis, J. T., Merlivat, L., Metzl, N., Murata, A., Newberger, T., Omar, A. M., Ono, T., Park, G.-H., Paterson, K., Pierrot, D., Ríos, A. F., Sabine, C. L., Saito, S., Salisbury, J., Sarma, V. V. S. S., Schlitzer, R., Sieger, R., Skjelvan, I., Steinhoff, T., Sullivan, K. F., Sun, H., Sutton, A. J., Suzuki, T., Sweeney, C., Takahashi, T., Tjiputra, J., Tsurushima, N., van Heuven, S. M. A. C., Vandemark, D., Vlahos, P., Wallace, D. W. R., Wanninkhof, R., and Watson, A. J.
Abstract:: The Surface Ocean CO2 Atlas (SOCAT), an activity of the international marine carbon research community, provides access to synthesis and gridded fCO2 (fugacity of carbon dioxide) products for the surface oceans. Version 2 of SOCAT is an update of the previous release (version 1) with more data (increased from 6.3...
Resource Type:: Article
Full Text:: , A., Pfeil, B., Smith, K., Alin, S. R., ... & Murata, A. (2014). An update to the Surface Ocean CO

Phylogeny of minute carabid beetles and their relatives based upon DNA sequence data (Coleoptera, Carabidae, Trechitae)

Creator:: Maddison, David R. and Ober, Karen A.
Abstract:: The phylogeny of ground beetles of supertribe Trechitae is inferred using DNA sequences of genes that code for 28S ribosomal RNA, 18S ribosomal RNA, and wingless. Within the outgroups, austral psydrines are inferred to be monophyletic, and separate from the three genera of true Psydrina (Psydrus, Nomius, Laccocenus); the austral...
Resource Type:: Article
Full Text:: data (Coleoptera, Carabidae, Trechitae) David R. Maddison1, Karen A. Ober2 1 Department of

The status and challenge of global fire modelling

Creator:: Hantson, Stijn, Arneth, Almut, Harrison, Sandy P., Kelley, Douglas I., Prentice, I. Colin, Rabin, Sam S., Archibald, Sally, Mouillot, Florent, Arnold, Steve R., Artaxo, Paulo, Bachelet, Dominique, Ciais, Philippe, Forrest, Matthew, Friedlingstein, Pierre, Hickler, Thomas, Kaplan, Jed O., Kloster, Silvia, Knorr, Wolfgang, Lasslop, Gitta, Li, Fang, Mangeon, Stephane, Melton, Joe R., Meyn, Andrea, Sitch, Stephen, Spessa, Allan, van der Werf, Guido R., Voulgarakis, Apostolos, and Yue, Chao
Abstract:: Biomass burning impacts vegetation dynamics, biogeochemical cycling, atmospheric chemistry, and climate, with sometimes deleterious socio-economic impacts. Under future climate projections it is often expected that the risk of wildfires will increase. Our ability to predict the magnitude and geographic pattern of future fire impacts rests on our ability to model...
Resource Type:: Article
Full Text:: . Kelley2,3, I. Colin Prentice3,4, Sam S. Rabin5, Sally Archibald6,7, Florent Mouillot8, Steve R. Arnold9

Malonate Inhibits Virulence Gene Expression in Vibrio cholerae

Creator:: Minato, Yusuke, Fassio, Sara R., and Häse, Claudia C.
Abstract:: We previously found that inhibition of the TCA cycle, either through mutations or chemical inhibition, increased toxT transcription in Vibrio cholerae. In this study, we found that the addition of malonate, an inhibitor of succinate dehydrogenase (SDH), decreased toxT transcription in V. cholerae, an observation inconsistent with the previous pattern...
Resource Type:: Article
Full Text:: Vibrio cholerae Yusuke Minato1, Sara R. Fassio2, Claudia C. Häse1,2* 1 Department of Biomedical

Quantification of Habitat and Community Relationships among Nearshore Temperate Fishes Through Analysis of Drop Camera Video

Creator:: Easton, Ryan R., Heppell, Selina S., and Hannah, Robert W.
Abstract:: Temperate nearshore reefs along the Pacific coast of North America are highly valuable to commercial and recreational fisheries yet comprise a small fraction of the seabed. Monitoring fisheries resources in this region is difficult; high-relief structural complexity and adverse sea conditions have led to a paucity of information on temperate...
Resource Type:: Article
Full Text:: Easton, R. R., Heppell, S. S., & Hannah, R. W. (2015). Quantification of Habitat and Community

Evaluating the agreement between measurements and models of net ecosystem exchange at different times and timescales using wavelet coherence: an example using data from the North American Carbon Program Site-Level Interim Synthesis

Creator:: Stoy, P. C., Dietze, M. C., Richardson, A. D., Vargas, R., Barr, A. G., Anderson, R. S., Arain, M. A., Baker, Ian T., Black, T. Andrew, Chen, J. M., Cook, R. B., Gough, C. M., Grant, R. F., Hollinger, D. Y., Izaurralde, R. C., Kucharik, C. J., Lafleur, P., Law, B. E., Liu, S., Lokupitiya, E., Luo, Y., Munger, J. W., Peng, C., Poulter, B., Price, D. T., Ricciuto, D. M., Riley, W. J., Sahoo, A. K., Schaefer, K., Schwalm, C. R., Tian, H., Verbeeck, H., and Weng, E.
Abstract:: Earth system processes exhibit complex patterns across time, as do the models that seek to replicate these processes. Model output may or may not be significantly related to observations at different times and on different frequencies. Conventional model diagnostics provide an aggregate view of model–data agreement, but usually do not...
Resource Type:: Article
Full Text:: . Dietze2, A. D. Richardson3, R. Vargas4, A. G. Barr5, R. S. Anderson6, M. A. Arain7, I. T. Baker8, T. A

Thermal-plume fibre optic tracking (T-POT) test for flow velocity measurement in groundwater boreholes

Creator:: Bense, V. F, Hochreutener, R., Bour, O., Le Borgne, T., Lavenant, N., and Selker, J. S.
Abstract:: We develop an approach for measuring in-well fluid velocities using point electrical heating combined with spatially and temporally continuous temperature monitoring using distributed temperature sensing (DTS). The method uses a point heater to warm a discrete volume of water. The rate of advection of this plume, once the heating is...
Resource Type:: Article
Full Text:: groundwater boreholes T. Read1, V. F. Bense2, R. Hochreutener4, O. Bour3, T. Le Borgne3, N. Lavenant3, and J

High-Density SNP Genotyping of Tomato (Solanum lycopersicum L.) Reveals Patterns of Genetic Variation Due to Breeding

Creator:: Sim, Sung-Chur, Van Deynze, Allen, Stoffel, Kevin, Douches, David S., Zarka, Daniel, Ganal, Martin W., Chetelat, Roger T., Hutton, Samuel F., Scott, John W., Gardner, Randolph G., Panthee, Dilip R., Mutschler, Martha, Myers, James R., and Francis, David M.
Abstract:: The effects of selection on genome variation were investigated and visualized in tomato using a high-density single nucleotide polymorphism (SNP) array. 7,720 SNPs were genotyped on a collection of 426 tomato accessions (410 inbreds and 16 hybrids) and over 97% of the markers were polymorphic in the entire collection. Principal...
Resource Type:: Article
Full Text:: . Hutton6, John W. Scott6, Randolph G. Gardner7, Dilip R. Panthee7, Martha Mutschler8, James R. Myers9

MTB-3, a Microtubule Plus-End Tracking Protein (+TIP) of Neurospora crassa

Creator:: Mourino-Perez, Rosa R., Linacre-Rojas, Lorena P., Roman-Gavilanes, Ariana I., Lew, Thomas K., Callejas-Negrete, Olga A., Roberson, Robert W., and Freitag, Michael
Abstract:: The microtubule (MT) "plus end" constitutes the platform for the accumulation of a structurally and functionally diverse group of proteins, collectively called "MT plus-end tracking proteins" (+TIPs). +TIPs control MT dynamics and link MTs to diverse sub-cellular structures. Neurospora crassa MicroTubule Binding protein-3 (MTB-3) is the homolog of yeast EB1,...
Resource Type:: Article
Full Text:: (+TIP) of Neurospora crassa Rosa R. Mouriño-Pérez1*, Lorena P. Linacre-Rojas1, Ariana I. Román

High-Throughput Sequencing of Arabidopsis microRNAs : Evidence for Frequent Birth and Death of MIRNA Genes

Creator:: Fahlgren, Noah, Howell, Miya D., Kasschau, Kristin D., Sullivan, Christopher M., Cumbie, Jason S., Givan, Scott A., Law, Theresa F., Grant, Sarah R., Dangl, Jeffrey L., and Carrington, James C.
Abstract:: In plants, microRNAs (miRNAs) comprise one of two classes of small RNAs that function primarily as negative regulators at the posttranscriptional level. Several MIRNA genes in the plant kingdom are ancient, with conservation extending between angiosperms and the mosses, whereas many others are more recently evolved. Here, we use deep...
Resource Type:: Article
Full Text:: . Law3, Sarah R. Grant3, Jeffery L. Dangl3, James C. Carrington1* 1 Center for Genome Research and

ScholarsArchive@OSU

An update to the Surface Ocean CO₂ Atlas (SOCAT version 2)

Phylogeny of minute carabid beetles and their relatives based upon DNA sequence data (Coleoptera, Carabidae, Trechitae)

The status and challenge of global fire modelling

Malonate Inhibits Virulence Gene Expression in Vibrio cholerae

Quantification of Habitat and Community Relationships among Nearshore Temperate Fishes Through Analysis of Drop Camera Video

Evaluating the agreement between measurements and models of net ecosystem exchange at different times and timescales using wavelet coherence: an example using data from the North American Carbon Program Site-Level Interim Synthesis

Thermal-plume fibre optic tracking (T-POT) test for flow velocity measurement in groundwater boreholes

High-Density SNP Genotyping of Tomato (Solanum lycopersicum L.) Reveals Patterns of Genetic Variation Due to Breeding

MTB-3, a Microtubule Plus-End Tracking Protein (+TIP) of Neurospora crassa

High-Throughput Sequencing of Arabidopsis microRNAs : Evidence for Frequent Birth and Death of MIRNA Genes

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