Index Catalog // ScholarsArchive@OSU

Molecular genetic characterization of Chinook salmon (Oncorhynchus tschawytscha) runs for California’s central valley

Creator:: Banks, Michael A.
Abstract:: The application of DNA based markers towards the task of discriminating among alternate salmon runs has evolved in accord with ongoing genomic developments and increasingly enabled resolution of which genetic markers associate with important life history differences. Accurate and efficient identification of the most likely origin for salmon encountered during...
Resource Type:: Dataset

Umpqua Coho Salmon Genetic Pedigree

Creator:: Banks, Michael A., Blouin, Michael S., Moyer, Gregory R., Theriault, Veronique, Whitcomb, Amelia, Loomis, David, and Jackson, Laura S.
Abstract:: Data, pedigrees, reports and manuscripts herein are from an investigation conducted with coho salmon of the Umpqua River in southern Oregon from 2001-2009. They relate to a study investigating several areas of uncertainty about the use of salmon hatcheries to increase the abundance of wild populations. At that time, there...
Resource Type:: Dataset

Offspring of first-generation hatchery steelhead trout (Oncorhynchus mykiss) grow faster in the hatchery than offspring of wild fish, but survive worse in the wild: Possible mechanisms for inadvertent domestication and fitness loss in hatchery salmon

Creator:: Blouin, Michael S., Wrey, Madeleine C., Bollmann, Stephanie R., Skaar, James C., Twibell, Ronald G., and Fuentes, Claudio
Abstract:: Salmonid fish raised in hatcheries often have lower fitness (number of returning adult offspring) than wild fish when both spawn in the wild. Body size at release from hatcheries is positively correlated with survival at sea. So one explanation for reduced fitness is that hatcheries inadvertently select for trait values...
Resource Type:: Article
Full Text:: domestication and fitness loss in hatchery salmon Michael S. BlouinID 1*, Madeleine C. Wrey1¤, Stephanie R

Usage, Costs, and Benefits of Continuous Integration in Open-Source Projects

Creator:: Hilton, Michael, Tunnell, Timothy, Huang, Kai, Marinov, Darko, and Dig, Danny
Abstract:: Continuous integration (CI) systems automate the compilation, building, and testing of software. Despite CI rising as a big success story in automated software engineering, it has received almost no attention from the research community. For example, how widely is CI used in practice, and what are some costs and benefits...
Resource Type:: Technical Report
Full Text:: -Source Projects Michael Hilton Oregon State University hiltonm@eecs.oregonstate.edu Timothy Tunnell

Ungulate Browsing Maintains Shrub Diversity in the Absence of Episodic Disturbance in Seasonally-Arid Conifer Forest

Creator:: Pekin, Burak K., Wisdom, Michael J., Endress, Bryan A., Naylor, Bridgett J., and Parks, Catherine G.
Abstract:: Ungulates exert a strong influence on the composition and diversity of vegetation communities. However, little is known about how ungulate browsing pressure interacts with episodic disturbances such as fire and stand thinning. We assessed shrub responses to variable browsing pressure by cattle and elk in fuels treated (mechanical removal of...
Resource Type:: Article
Full Text:: Diversity in the Absence of Episodic Disturbance in Seasonally-Arid Conifer Forest Burak K. Pekin1*, Michael

Deciphering the Cryptic Genome: Genome-wide Analyses of the Rice Pathogen Fusarium fujikuroi Reveal Complex Regulation of Secondary Metabolism and Novel Metabolites

Creator:: Wiemann, Philipp, Sieber, Christian M. K., von Bargen, Katharina W., Studt, Lena, Niehaus, Eva- Maria, Espino, Jose J., Huß, Kathleen, Michielse, Caroline B., Albermann, Sabine, Wagner, Dominik, Bergner, Sonja V., Connolly, Lanelle R., Fischer, Andreas, Reuter, Gunter, Kleigrewe, Karin, Bald, Till, Wingfield, Brenda D., Ophir, Ron, Freeman, Stanley, Hippler, Michael, Smith, Kristina M., Brown, Daren W., Proctor, Robert H., Munsterkotter, Martin, Freitag, Michael, Humpf, Hans-Ulrich, Guldener, Ulrich, and Tudzynski, Bettina
Abstract:: The fungus Fusarium fujikuroi causes "bakanae" disease of rice due to its ability to produce gibberellins (GAs), but it is also known for producing harmful mycotoxins. However, the genetic capacity for the whole arsenal of natural compounds and their role in the fungus' interaction with rice remained unknown. Here, we...
Resource Type:: Article
Full Text:: , Dominik Wagner1, Sonja V. Bergner4, Lanelle R. Connolly5, Andreas Fischer6, Gunter Reuter6, Karin

Geo-Referenced, Abundance Calibrated Ocean Distribution of Chinook Salmon (Oncorhynchus tshawytscha) Stocks across the West Coast of North America

Creator:: Bellinger, M. Renee, Banks, Michael A., Bates, Sarah J., Crandall, Eric D., Garza, John Carlos, Sylvia, Gil, and Lawson, Peter W.
Abstract:: Understanding seasonal migration and localized persistence of populations is critical for effective species harvest and conservation management. Pacific salmon (genus Oncorhynchus) forecasting models predict stock composition, abundance, and distribution during annual assessments of proposed fisheries impacts. Most models, however, fail to account for the influence of biophysical factors on year-to-year...
Resource Type:: Article
Full Text:: across the West Coast of North America Bellinger, M. R., Banks, M. A., Bates, S. J., Crandall, E. D

OSU Counseling Academic Unit Dissertations : 1947-2013

Creator:: Dykeman, Cass
Abstract:: An index of doctoral dissertations completed within OSU’s Counseling Academic Unit and accepted by the Graduate School, Oregon State University.
Resource Type:: Other
Full Text:: . Photo of Anna Meeks 33 X. Photo of Michael Ingram 34 XI. References 35

Integrated Landscape Assessment Project final report

Creator:: Gaines, Lisa, Hemstrom, Miles, Kagan, Jimmy, and Salwasser, Janine
Abstract:: The Integrated Landscape Assessment Project (ILAP) was a multi-year effort to produce information, maps, and models to help land managers, policy-makers, and others conduct mid- to broad-scale (e.g., watersheds to states and larger areas) prioritization of land management actions, perform landscape assessments, and estimate cumulative effects of management actions for...
Resource Type:: Technical Report
Full Text:: Noone Michael Polly Kuuipo Walsh Lindsey Wise Melissa Whitman Vegetation Modeling Module

Mapping the Global Emergence of Batrachochytrium dendrobatidis, the Amphibian Chytrid Fungus

Creator:: Olson, Deanna H., Aanensen, David M., Ronnenberg, Kathryn L., Powell, Christopher I., Walker, Susan F., Bielby, Jon, Garner, Trenton W. J., Weaver, George, The Bd Mapping Group, and Fisher, Matthew C.
Abstract:: The rapid worldwide emergence of the amphibian pathogen Batrachochytrium dendrobatidis (Bd) is having a profound negative impact on biodiversity. However, global research efforts are fragmented and an overarching synthesis of global infection data is lacking. Here, we provide results from a community tool for the compilation of worldwide Bd presence...
Resource Type:: Article
Full Text:: their transmission potential, then even poor transmitters of the pathogen (bwithin R 0) may suffer

ScholarsArchive@OSU

Molecular genetic characterization of Chinook salmon (Oncorhynchus tschawytscha) runs for California’s central valley

Umpqua Coho Salmon Genetic Pedigree

Offspring of first-generation hatchery steelhead trout (Oncorhynchus mykiss) grow faster in the hatchery than offspring of wild fish, but survive worse in the wild: Possible mechanisms for inadvertent domestication and fitness loss in hatchery salmon

Usage, Costs, and Benefits of Continuous Integration in Open-Source Projects

Ungulate Browsing Maintains Shrub Diversity in the Absence of Episodic Disturbance in Seasonally-Arid Conifer Forest

Deciphering the Cryptic Genome: Genome-wide Analyses of the Rice Pathogen Fusarium fujikuroi Reveal Complex Regulation of Secondary Metabolism and Novel Metabolites

Geo-Referenced, Abundance Calibrated Ocean Distribution of Chinook Salmon (Oncorhynchus tshawytscha) Stocks across the West Coast of North America

OSU Counseling Academic Unit Dissertations : 1947-2013

Integrated Landscape Assessment Project final report

Mapping the Global Emergence of Batrachochytrium dendrobatidis, the Amphibian Chytrid Fungus

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