Index Catalog // ScholarsArchive@OSU

Outcome of the First wwPDB/CCDC/D3R Ligand Validation Workshop

Creator:: Adams, Paul D., Aertgeerts, Kathleen, Bauer, Cary, Bell, Jeffrey A., Berman, Helen M., Bhat, Talapady N., Blaney, Jeff M., Bolton, Evan, Bricogne, Gerard, Brown, David, Burley, Stephen K., Case, David A., Clark, Kirk L., Darden, Tom, Emsley, Paul, Feher, Victoria A., Feng, Zukang, Groom, Colin R., Harris, Seth F., Hendle, Jorg, Holder, Thomas, Joachimiak, Andrzej, Kleywegt, Gerard J., Krojer, Tobias, Marcotrigiano, Joseph, Mark, Alan E., Markley, John L., Miller, Matthew, Minor, Wladek, Montelione, Gaetano T., Murshudov, Garib, Nakagawa, Atsushi, Nakamura, Haruki, Nicholls, Anthony, Nicklaus, Marc, Nolte, Robert T., Padyana, Anil K., Peishoff, Catherine E., Pieniazek, Susan, Read, Randy J., Shao, Chenghua, Sheriff, Steven, Smart, Oliver, Soisson, Stephen, Spurlino, John, Stouch, Terry, Svobodova, Radka, Tempel, Wolfram, Terwilliger, Thomas C., Tronrud, Dale, Velankar, Sameer, Ward, Suzanna C., Warren, Gregory L., Westbrook, John D., Williams, Pamela, Yang, Huanwang, and Young, Jasmine
Abstract:: Crystallographic studies of ligands bound to biological macromolecules (proteins and nucleic acids) represent an important source of information concerning drug-target interactions, providing atomic level insights into the physical chemistry of complex formation between macromolecules and ligands. Of the more than 115,000 entries extant in the Protein Data Bank (PDB) archive,...
Resource Type:: Article

Registration of ‘Alba’ Barley

Creator:: Graebner, Ryan C., Cuesta-Marcos, Alfonso, Fisk, Scott, Brouwer, Brook O., Jones, Stephen S., and Hayes, Patrick M.
Abstract:: 'Alba' (Reg. No. [CV-355, PI 672535]) is a winter, six-row barley released by the Oregon Agricultural Experiment Station in 2012. The name “Alba” was chosen due to the bright and attractive appearance of the crop at maturity. In high rainfall environments, it has a notable yield advantage over check varieties...
Resource Type:: Article
Full Text:: . Graebner, Alfonso Cuesta-Marcos, Scott Fisk, Brook O. Brouwer, Stephen S. Jones and 2 Patrick M. Hayes* 3

Regenerating Oregon's forests : a guide for the regeneration forester

Creator:: Cleary, Brian D., Greaves, Robert D., Hermann, Richard K., and Oregon State University. Extension Service
Abstract:: Published September 1978. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Resource Type:: Technical Report
Full Text:: Forester Compiled and Edited by Brian D. Cleary Robert D. Greaves Richard K. Hermann Oregon State

Host-Specific Involvement of the HC Protein in the Long-Distance Movement of Potyviruses

Creator:: Sáenz, Pilar, Salvador, Beatriz, Simón-Mateo, Carmen, Kasschau, Kristin D., Carrington, James C., and García, Juan Antonio
Abstract:: Plum pox virus (PPV) is a member of the Potyvirus genus that, in nature, infects trees of the Prunus genus. Although PPV infects systemically several species of the Nicotiana genus, such as N. clevelandii and N. benthamiana, and replicates in the inoculated leaves of N. tabacum, it is unable to...
Resource Type:: Article
Full Text:: , Kentucky 14, Burley 21, and Havana 425) were infected with several isolates of the PPV strains D, C, and M

Evaluating Letharia Vulpina Transplants for Bioindication of Nitrogen Deposition

Creator:: Kovasi, Adrienne, McCune, Bruce, and Jovan, Sarah
Abstract:: The epiphytic lichen Letharia vulpina has been commonly sampled in-situ for nitrogen (N) deposition biomonitoring studies but has never before been transplanted for this purpose. In the high-elevation wilderness areas of southern California Letharia vulpina is generally uncommon, making in-situ sampling difficult. In this study, we compared thallus N accumulation...
Resource Type:: Article
Full Text:: NO2 (Burley et al., 251 2016) and this area was inundated with smoke during much of the summer and

C–H···O Non-Classical Hydrogen Bonding in the Stereomechanics of Organic Transformations: Theory and Recognition

Creator:: Johnston, Ryne C. and Cheong, Paul Ha-Yeon
Abstract:: This manuscript describes the role of non-classical hydrogen bonds (NCHBs), specifically C–H···O interactions, in modern synthetic organic transformations. Our goal is to point out the seminal examples where C–H···O interactions have been invoked as a key stereocontrolling element and to provide predictive value in recognizing future and/or potential C–H···O interactions...
Resource Type:: Article
Full Text:: . (c) S. K. Burley and G. A. Petsko, FEBS Letters, 1986, 203, 139–143. (d) H. S. Rzepa, M. H. Smith

Directory of Oregon forest interest groups

Creator:: Oregon State University. Extension Service, Steel, Brent S., List, Peter C., and Shindler, Bruce A.
Abstract:: Published April 1993. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Resource Type:: Technical Report
Full Text:: Environmental Awareness Environmental Education Hiking Recreation Species Destruction 30 Name Burley

Registration of the TCAP FAC-WIN6 Barley Panel for Genomewide Association Studies

Creator:: Belcher, Araby R., Graebner, Ryan C., Cuesta-Marcos, Alfonso, Fisk, Scott, Filichkin, Tanya, Smith, Kevin P., Blake, Victoria C., and Hayes, Patrick M.
Abstract:: Facultative/winter six-row malting barley is a distinct elite germplasm pool and a valuable resource that may prove useful in meeting the challenges of climate change. To preserve its diversity and make it accessible to the research and agricultural communities, the Oregon State University and University of Minnesota barley breeding programs...
Resource Type:: Article
Full Text:: Association Studies Belcher, A. R., Graebner, R. C., Cuesta-Marcos, A., Fisk, S., Filichkin, T., Smith, K. P

Surface-based GPR underestimates below-stump root biomass

Creator:: Butnor, John R., Samuelson, Lisa J., Stokes, Thomas A., Johnsen, Kurt H., Anderson, Peter H., and González-Benecke, Carlos A.
Abstract:: Aims: While lateral root mass is readily detectable with ground penetrating radar (GPR), the roots beneath a tree (below-stump) and overlapping lateral roots near large trees are problematic for surface-based antennas operated in reflection mode. We sought to determine if tree size (DBH) effects GPR root detection proximal to longleaf...
Resource Type:: Article
Full Text:: , Aiken Center, Room 208, University of Vermont, Burlington, VT 05405, USA e-mail: jbutnor@fs.fed.us K. H

Risk-based planning analysis for a single levee

Creator:: Hui, Rui, Jachens, Elizabeth, and Lund, Jay
Abstract:: Traditional risk-based analysis for levee planning focuses primarily on overtopping failure. Although many levees fail before overtopping, few planning studies explicitly include intermediate geotechnical failures in flood risk analysis. This study develops a risk-based model for two simplified levee failure modes: overtopping failure and overall intermediate geotechnical failure from through-seepage,...
Resource Type:: Article
Full Text:: rate of seepage per unit length of the levee, k is the soil conductivity which is assumed con- stant in

ScholarsArchive@OSU

Outcome of the First wwPDB/CCDC/D3R Ligand Validation Workshop

Registration of ‘Alba’ Barley

Regenerating Oregon's forests : a guide for the regeneration forester

Host-Specific Involvement of the HC Protein in the Long-Distance Movement of Potyviruses

Evaluating Letharia Vulpina Transplants for Bioindication of Nitrogen Deposition

C–H···O Non-Classical Hydrogen Bonding in the Stereomechanics of Organic Transformations: Theory and Recognition

Directory of Oregon forest interest groups

Registration of the TCAP FAC-WIN6 Barley Panel for Genomewide Association Studies

Surface-based GPR underestimates below-stump root biomass

Risk-based planning analysis for a single levee

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