We present a systems modeling approach to the development of a place-based ecohydrological model. The conceptual model is calibrated to a variety of existing observations, taken in watershed 10 (WS10) at the HJ Andrews Experimental Forest (HJA) in Oregon, USA, a long term ecological research (LTER) site with a long...
This study presents (1) the overall concept of assessing non-federal western rangeland soil loss rates at a national scale for determining areas of vulnerability for accelerated soil loss using USDA Natural Resources Conservation Service (NRCS) National Resources Inventory (NRI) data and the Rangeland Hydrology and Erosion Model (RHEM) and (2)...
Peroxiredoxins (Prxs) were not recognized as a family of enzymes until the 1990s but are now known to be the dominant peroxidases in most organisms. Here, the history and fundamental properties of peroxiredoxins are briefly reviewed, with a special focus on describing how an exquisitely tunable balance between fully folded...
A technical definition of artisan breads is proposed, based on the concepts of lean formulations, long fermentations, and the use of process as the primary way to adapt to changing flour qualities. The current status of what constitutes refined flour for artisan bread production is presented and a conclusion drawn...
As fisheries management shifts to an ecosystem-based approach, understanding energy pathways and trophic relationships in the Northern California Current (NCC) will become increasingly important for predictive modeling and understanding ecosystem response to changing ocean conditions. In the NCC, pelagic forage fishes are a critical link between seasonal and interannual variation...
Although ammonia-oxidizing archaea (AOA) and bacteria (AOB) coexist in most non-acidic agricultural soils, the factors that influence their relative contributions to soil nitrification activity remain unclear. A 2- to 4-d whole soil microcosm assay was developed, utilizing the aliphatic C₈ alkyne 1-octyne to inactivate AOB-driven nitrification activity without impacting AOA...
The quality of macromolecular crystal structures depends, in part, on the quality and quantity of the data used to produce them. Here, we review recent shifts in our understanding of how to use data quality indicators to select a high resolution cutoff that leads to the best model, and of...
Phylogenetic analyses of assemblage membership provide insight into how ecological communities are structured. However, despite the scale-dependency of many ecological processes, little is known about how assemblage and source pool size definitions can be altered, either alone or together, to provide insight into how ecological diversity is maintained. Moreover, although...
The investigation of the consequences of trying to blend tropical Pacific observations from the Tropical Atmosphere–Ocean (TAO) array into the dynamical framework of an intermediate coupled ocean–atmosphere model is continued. In a previous study it was found that the model dynamics, the prior estimates of uncertainty in the observations, and...
