Index Catalog // ScholarsArchive@OSU

Supplemental data to "A draft genome and transcriptome of common milkweed (Asclepias syriaca) as resources for evolutionary, ecological, and molecular studies in milkweeds and Apocynaceae"

Creator:: Weitemier, Kevin A.
Abstract:: This dataset contains a draft assembly of the common milkweed (Asclepias syriaca) nuclear genome, linkage group information, and gene family counts for Asclepias and related species. The genome assembly is accompanied by annotation of gene models, repeat models, transfer RNAs, and open reading frames, and mapping information of Asclepias transcripts,...
Resource Type:: Dataset

Supplemental data to "Casting a broader net: Using microfluidic metagenomics to capture aquatic biodiversity data from diverse taxonomic targets"

Creator:: Hauck, Laura L., Weitemier, Kevin A., Penaluna, Brooke E., Garcia, Tiffany, and Cronn, Richard
Abstract:: This dataset contains the taxonomic classifications of environmental DNA (eDNA) sequences obtained from Fall Creek, Oregon, via microfluidic multiplex PCR (Fluidigm Access Array) and high-throughput sequencing. It is accompanied by electrofishing counts taken at the same time as the eDNA samples. Metadata and R scripts are provided to analyze the...
Resource Type:: Dataset

A broad-spectrum cloning vector that exists as both an integrated element and a free plasmid in Chlamydia trachomatis

Creator:: Garvin, Lotisha, Vande Voorde, Rebecca, Dickinson, Mary, Carrell, Steven, Hybiske, Kevin, and Rockey, Daniel
Abstract:: Plasmid transformation of chlamydiae has created new opportunities to investigate host–microbe interactions during chlamydial infections; however, there are still limitations. Plasmid transformation requires a replicon derived from the native Chlamydia plasmid, and these transformations are species-specific. We explored the utility of a broad host-range plasmid, pBBR1MCS-4, to transform chlamydiae, with...
Resource Type:: Article
Full Text:: GarvinID 1, Rebecca Vande Voorde1, Mary Dickinson2, Steven Carrell1, Kevin Hybiske2, Daniel RockeyID 1* 1

GrünwaldNiklausBotanyPlantPathologyEphemeralSexualPopulation.pdf

Creator:: Danies, Giovanna, Myers, Kevin, Mideros, Maria F., Grünwald, Niklaus J., and et al.
Abstract:: Phytophthora infestans, the causal agent of late blight disease, has been reported in North America since the mid-nineteenth century. In the United States the lack of or very limited sexual reproduction has resulted in largely clonal populations of P. infestans. In 2010 and 2011, but not in 2012 or 2013,...
Full Text:: the Northeastern United States and Canada Giovanna Danies1, Kevin Myers1, Marı́a F. Mideros2, Silvia

Quantitative Trait Loci Associated with the Tocochromanol (Vitamin E) Pathway in Barley

Creator:: Graebner, Ryan C., Wise, Mitchell, Cuesta-Marcos, Alfonso, Geniza, Matthew, Blake, Tom, Blake, Victoria C., Butler, Joshua, Chao, Shiaoman, Hole, David J., Horsley, Rich, Jaiswal, Pankaj, Obert, Don, Smith, Kevin P., Ullrich, Steven, and Hayes, Patrick M.
Abstract:: The Genome-Wide Association Studies approach was used to detect Quantitative Trait Loci associated with tocochromanol concentrations using a panel of 1,466 barley accessions. All major tocochromanol types- α-, β-, δ-, γ-tocopherol and tocotrienol- were assayed. We found 13 single nucleotide polymorphisms associated with the concentration of one or more of...
Resource Type:: Article
Full Text:: E) Pathway in Barley Graebner, R. C., Wise, M., Cuesta-Marcos, A., Geniza, M., Blake, T., Blake, V

PérezVivianaBiochemistryBiophysicsMiceFedRapamycin.pdf

Creator:: Fok, Wilson C., Chen, Yidong, Bokov, Alex, Zhang, Yiqiang, Salmon, Adam B., Diaz, Vivian, Javors, Martin, Wood, William H., III, Zhang, Yongqing, Becker, Kevin G., Pérez, Viviana I., and Richardson, Arlan
Abstract:: Rapamycin was found to increase (11% to 16%) the lifespan of male and female C57BL/6J mice most likely by reducing the increase in the hazard for mortality (i.e., the rate of aging) term in the Gompertz mortality analysis. To identify the pathways that could be responsible for rapamycin’s longevity effect,...
Full Text:: . Salmon2,7,11, Vivian Diaz2, Martin Javors8, William H. Wood, 3rd9, Yongqing Zhang9, Kevin G. Becker9, Viviana

Alsea watershed study revisited: unpublished temperature datasets from pre-harvest 2006 to 2010

Creator:: Bladon, Kevin, Cook, Nicholas, Light, Jeffery, Segura, Catalina, Skaugset, Arne, Hale, Cody, Leer, David, Garland, Tina, Simmons, Amy, Irving, Alex, Ice, George G., Danehy, Robert, Bousquet, Terry, Cook, Diana, Napack, Jan, Campbell, David, Louch, Jeff, Stednick, John, and Menk, Matthew
Abstract:: These data contain temperature readings from dataloggers launched in Deer Creek, Flynn Creek, and Needle Branch from 2006 to 2010. These loggers were apart of the Alsea Watershed Revisisted Study Revisited articles, but the data was incomplete due to logging gaps, temperature spikes, or other issues. The "Thermistor Functionality" datasets...
Resource Type:: Dataset
Full Text:: , Danehy R , Bousquet T , Cook D , Napack J , Campbell D , Louch J , Stednick J , and Menk M. Alsea

WallaceReoccupancyBreedingTerritories.PDF

Creator:: Wallace, Zachary P., Kennedy, Patricia L., Squires, John R., Oakleaf, Robert J., Olson, Lucretia E., and Dugger, Katie M.
Abstract:: Grassland and shrubland birds are declining globally due in part to anthropogenic habitat modification. Because population performance of these species is also influenced by non-anthropogenic factors, it is important to incorporate all relevant ecological drivers into demographic models. We used design-based sampling and occupancy models to test relationships of environmental...
Full Text:: Factors Zachary P. Wallace1,2¤*, Patricia L. Kennedy1,2, John R. Squires3, Robert J. Oakleaf4, Lucretia E

Geo-Referenced, Abundance Calibrated Ocean Distribution of Chinook Salmon (Oncorhynchus tshawytscha) Stocks across the West Coast of North America

Creator:: Bellinger, M. Renee, Banks, Michael A., Bates, Sarah J., Crandall, Eric D., Garza, John Carlos, Sylvia, Gil, and Lawson, Peter W.
Abstract:: Understanding seasonal migration and localized persistence of populations is critical for effective species harvest and conservation management. Pacific salmon (genus Oncorhynchus) forecasting models predict stock composition, abundance, and distribution during annual assessments of proposed fisheries impacts. Most models, however, fail to account for the influence of biophysical factors on year-to-year...
Resource Type:: Article
Full Text:: across the West Coast of North America Bellinger, M. R., Banks, M. A., Bates, S. J., Crandall, E. D

Report of the Klamath County Agricultural Economic Conference : 1927

Creator:: Oregon State College. Extension Service, Klamath County (Or.), and Long Range Planning Conference (1927 : Klamath County, Or.)
Abstract:: Published July 1927. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Resource Type:: Technical Report
Full Text:: by Mr. H. R. Milner. Mr. Milner moved that the report be adopted. The motion was seconded and carried

ScholarsArchive@OSU

Supplemental data to "A draft genome and transcriptome of common milkweed (Asclepias syriaca) as resources for evolutionary, ecological, and molecular studies in milkweeds and Apocynaceae"

Supplemental data to "Casting a broader net: Using microfluidic metagenomics to capture aquatic biodiversity data from diverse taxonomic targets"

A broad-spectrum cloning vector that exists as both an integrated element and a free plasmid in Chlamydia trachomatis

GrünwaldNiklausBotanyPlantPathologyEphemeralSexualPopulation.pdf

Quantitative Trait Loci Associated with the Tocochromanol (Vitamin E) Pathway in Barley

PérezVivianaBiochemistryBiophysicsMiceFedRapamycin.pdf

Alsea watershed study revisited: unpublished temperature datasets from pre-harvest 2006 to 2010

WallaceReoccupancyBreedingTerritories.PDF

Geo-Referenced, Abundance Calibrated Ocean Distribution of Chinook Salmon (Oncorhynchus tshawytscha) Stocks across the West Coast of North America

Report of the Klamath County Agricultural Economic Conference : 1927

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