Generating a contiguous, ordered reference sequence of a complex genome such as hexaploid wheat (2n = 6x = 42; approximately 17 GB) is a challenging task due to its large, highly repetitive, and allopolyploid genome. In wheat, ordering of whole-genome or hierarchical shotgun sequencing contigs is primarily based on recombination...
Generating a contiguous, ordered reference sequence of a complex genome such as hexaploid wheat (2n = 6x = 42; approximately 17 GB) is a challenging task due to its large, highly repetitive, and allopolyploid genome. In wheat, ordering of whole-genome or hierarchical shotgun sequencing contigs is primarily based on recombination...
Single nucleotide polymorphisms (SNPs) are the most common DNA polymorphisms in plant and animal genomes. SNPs were identified in the allele sequences of up to 12 sunflower (Helianthus annuus L.) genotypes for a genome-wide sample of 81 loci originally mapped using restriction fragment length polymorphism (RFLP) markers. The RFLP loci...
Wheat (Triticum aestivum L.) is one of the major crops produced in the U.S. Pacific Northwest, a region known for its wheat production for international export. Wheat production in the region is threatened by diseases such as Cephalosporium stripe and stripe rust. Cephalosporium stripe is a vascular wilt disease of...
Wheat sharp eyespot (SES), caused by the soil-borne fungus Rhizoctonia cerealis is a common stem disease of wheat globally. The disease caused a severe and extensive epidemic throughout the Willamette Valley of Oregon in 2014 and has remained one of the most important wheat diseases in this region. However, litte...
Wildtype sunflower typically produces 12-24% oleic acid (18:1) and 70-82%
linoleic acid (18:2). High-oleic sunflower, by contrast, produces up to 80-94% oleic
acid. The monounsaturated oleic acid has a greater oxidative stability than the
polyunsaturated linoleic acid, predominant in wildtype sunflower, and has greater
nutritional benefits than polyunsaturated and saturated...
Medium chain fatty acids (MCFAs) are important industrial feedstocks for
soaps, detergents and surfactants. Interspecific lines derived from Cuphea lanceolata
and Cup hea viscosissima are being domesticated as a temperate source of MCFAs.
These species also serve as model organisms for understanding the biosynthesis of
MCFAs in seeds. Various markers...
Meadowfoam (Limnanthes alba) is an oilseed crop with unique chemical characteristics. The ability to identify physiological maturity (PM) and harvest maturity HM of the crop would permit timely harvest of high quality seeds. However, changes of oil contents, fatty acid profile and glucosinolate contents, as well as seed quality during...
Increasing grain yield in wheat (Triticum aestivum L.) is a challenging task, because yield is a complex trait controlled by many genes and highly influenced by environmental factors. The genetic control of yield components and other traits associated with yield may be less complex and thus more manageable for breeding....
Stripe rust (Puccinia striiformis f. sp. tritici) has been receiving
increased attention in the USA since the appearance of more virulent races
detected in the past decade. These races caused yield losses even in areas
where the disease previously was rarely detected. Host plant resistance is the
most cost effective...