This study was conducted to investigate the accumulation of dietary polychlorinated biphenyls (PCB's) by a Mt. Shasta strain of rainbow trout (Salmo gairdneri). A commercial mixture of PCB's (Aroclor 1254) was added to the diet at a level of 15 ppm on a dry weight basis. Accumulation of PCB's was...
Interest in validating the eddy covariance (EC) technique under wave-induced flows led to a series of experiments in a 104-m-long large wave flume (LWF) using an acoustic Doppler velocimeter (ADV) and two oxygen microelectrodes (tips ~2 mm apart) mounted on a sturdy tripod. Four additional ADVs positioned within the flume...
The work presented in this dissertation highlights the various techniques available to characterize the increasingly complex surfaces of engineered biomaterials. The methods used range from the simple measurement of a contact angle with a smartphone to a complex synchrotron technique like near edge x-ray absorption fine structure (NEXAFS) spectroscopy to...
β-chitin/chitosan extracted from newly utilized jumbo squid (Dosidicus gigas) pens were investigated in respect to their physicochemical properties, polymeric structures, deacetylation and depolymerization characteristics, and antioxidant and antibacterial activities. These functional properties were further compared with α-chitin/chitosan prepared from shrimp shells. Due to the low mineral content (< 1%) and...
Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Economic impact assessment methodology was applied to UK fisheries data to better understand the implications of European Commission proposals for fishing for deep-sea stocks in the North-East Atlantic under the CFP. The aim was to assist the UK fishing industry and Government in evaluating the most effective options to manage...
This classification lists the native plant associations known to occur in Oregon, and includes both successional and climax vegetation types that were an important part of the presettlement landscape of Oregon. It serves as an index to the diversity, distribution and relative rarity of the state's native plant associations, and...
This report includes information concerning experimental use of unregistered pesticides or unregistered uses of pesticides. Experimental results should not be interpreted as recommendations for use. Use of unregistered materials or use of any registered pesticides inconsistent with its label is against both Federal Law and State Law.
The Chloroflexi CL500-11 clade contributes a large proportion of the bacterial biomass in the oxygenated hypolimnia of deep lakes worldwide, including the world's largest freshwater system, the Laurentian Great Lakes. Traits that allow CL500-11 to thrive and its biogeochemical role in these environments are currently unknown. Here, we found that...
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EC
A. Aerobic phosphorylation
Ga0063436_12234 NADH-quinone oxidoreductase, B subunit 1.6.5.3
Water transient storage zones are hotspots for metabolic activity in streams although the contribution of different types of transient storage zones to the whole-reach metabolic activity is difficult to quantify. In this study we present a method to measure the fraction of the transient storage that is metabolically active (MATS)...
This report includes information concerning experimental use of unregistered pesticides or unregistered uses of pesticides. Experimental results should not be interpreted as recommendations for use. Use of unregistered materials or use of any registered pesticides inconsistent with its label is against both Federal Law and State Law.
This report presents tables of suspended-sediment data collected from 1956 to 1967 at 10 sites in the Umpqua River basin. Computations based on these data indicate that average annual suspended-sediment yields at these sites range from 137 to 822 tons per square mile.
Because available data for the Umpqua River...
The exchange of carbon dioxide is a key measure of ecosystem metabolism and a critical intersection
between the terrestrial biosphere and the Earth’s climate. Despite the general agreement that
the terrestrial ecosystems in North America provide a sizeable carbon sink, the size and distribution
of the sink remain uncertain. We...
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(Baldocchi et al., 2001).
In contrast, the eddy covariance (EC) technique provides an
lternative approach to
Published February 1985. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Since its discovery in Oregon in 1946, the pear psylla, Psylla pyricola Forster, has become the most serious insect pest of pear. Damage to pear trees include the transmission of pear decline disease which has caused losses of trees, injection of a phytotoxic toxin resulting in tree shock and injury,...
Weight-loss supplements typically fall into 1 of 4 categories depending on their hypothesized mechanism of action: products that block the absorption of fat or carbohydrate, stimulants that increase thermogenesis, products that change metabolism and improve body composition, and products that suppress appetite or give a sense of fullness. Each category...
Published January 1936. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
This thesis presents a limited investigation of the effects
of various etches on the surface properties of silicon. Surface
recombination velocities of silicon under different etching treatments
are compared by using the photoelectromagnetic effect. A
measure of the minority carriers lifetime by the photoconductive
decay method provides another means of...
As the western United States continues to experience prolonged drought that is extending water deficits and threatening ecosystem resilience and socioeconomic systems, it will be vital to understand the relationship between water use and transport for proper water resource management. This is especially important to the agricultural areas of the...
Three culverts, judged to be fish barriers, were replaced with "stream simulation" culverts on the Fremont National Forest of south central Oregon. The culvert sites are located in the Fort Rock Basin in streams that are home to resident Great Basin redband trout (Oncorhynchus mykiss). Great Basin redband trout is...
Published February 1934. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Italian ryegrass (Lolium perenne spp. multiflorum) is a common weed management problem in turfgrasses, cereals and non-crop areas in the United States. In Oregon, the number of populations with multiple-resistance continues to increase. To manage these resistant populations, the resistance patterns must be determined. In this study, five Italian ryegrass...
Bioelution assays are fast, simple alternatives to in vivo testing. In this study, the intra- and inter-laboratory variability in bioaccessibility data generated by bioelution tests were evaluated in synthetic fluids relevant to oral, inhalation, and dermal exposure. Using one defined protocol, five laboratories measured metal release from cobalt oxide, cobalt...
Met is a prognostic indicator of colorectal cancer patient survival. Therapies that target Met may therefore have beneficial outcomes in the clinic. Recently, EGCG was reported to suppress Met activation, although the mechanisms were not elucidated. HCT116 and HT29 human colon cancer cells were used to examine the relationships between...
Local material damage that occurs within cellular solids, such as polymer foams and trabecular bone, and precedes local fractures of the cell struts or walls is called micro-damage. The accumulation of micro-damage within cellular solids is often undesirable, although it is thought to be vital to the development and health...
High pressure processing was investigated for controlling Cheddar cheese ripening. One-month- or 4-month-old Cheddar cheeses were subjected to pressures ranging from 200 to 800 MPa for 5 min at 25 °C. The number of viable Lactococcus lactis (starter) and Lactobacillus (nonstarter) cells decreased as pressure increased. Subsequent storage of the...
Published May 1989. Reprinted January 1993. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Experiments were performed to assess regulatory factors governing maize
embryo maturation and vivipary. Both visual and molecular markers of embryo
development were used to examine the roles of the hormones abscisic acid (ABA)
and gibberellins (GAs), as well as water stress in governing transit from early
embryogeny to maturation-phase development....
A low-energy, low-exposure-rate, guarded-field ionization
chamber system with a sensitive volume of approximately 1040 cm³ and an exposure-rate range from 60 mR/h to less than 0.5 mR/h
was designed, constructed and calibrated. The calibration was
effected by constructing and calibrating a 60 cm³ volume transfer
chamber of similar design against...
Coastal Oregon is deficient in quality construction aggregate.
There is, however, an abundance of lower quality, or marginal aggregate
available for construction purposes. The purpose of this report
is to develop techniques for upgrading marginal aggregates with portland
cement and methods for evaluating the relative performance of
these stabilized materials...
Responses to two cycles of mass selection for heading date,
followed by selfing or intermating, were studied in two diverse
winter wheat (Triticum aestivum L. em. Thell) crosses. Selection
was bidirectional, resulting in early and late populations for
each mating system, cycle, and cross. The influence of mass
selection for...
Lead-free Bi(Mg₁/₂Ti₁/₂)O₃-(Bi₁/₂K₁/₂)TiO₃-(Bi₁/₂Na₁/₂)TiO₃ (BMT-BKT-BNT) ceramics have
been shown to exhibit large electromechanical strains under high electric fields along with
negligible fatigue under strong electric fields. To investigate the role of point defects on the
fatigue characteristics, the composition 5BMT-40BKT-55BNT was doped to incorporate acceptor and
donor defects on the A and...
Phytophthora borealis and Phytophthora riparia, identified in recent Phytophthora surveys of forest streams in Oregon, California and Alaska, are described as new species in Phytophthora ITS Glade 6. They are similar in growth form and morphology to P. gonapodyides and are predominately sterile. They present unique DNA sequences, however, and...
A PID controller was designed to control the performance of an oil-heated fractal-like branching microchannel desorber for use in an ammonia-absorption refrigeration system. Both the amount and concentration of ammonia refrigerant generated at the desorber can be controlled by choosing the rectified circulation ratio as the controlled variable in a...
Irrigation percolation can be an important source of shallow aquifer replenishment in arid regions of the southwestern United States. Aquifer recharge derived from irrigation percolation can be more significant in fluvial valleys overlying shallow aquifers where highly permeable soils allow rapid water infiltration and aquifer replenishment. We used data from...
The genome of a herpesvirus highly pathogenic to rabbits, leporid herpesvirus 4 (LHV-4), was analyzed using high-throughput DNA sequencing technology and primer walking. The assembled DNA sequences were further verified by restriction endonuclease digestion and Southern blot analyses. The total length of the LHV-4 genome was determined to be about...
Published January 1995. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Re-introduction of large wood for expanding hydraulic variability is an increasingly common practice, yet it is not yet known what elements of hydraulic variability are most beneficial to fish. In an experiment designed to emphasize the minimization of energy expenditure through controlled predation and drift, we investigated whether juvenile coho,...
The Irish Sea, being an area fairly discrete and partially isolated from adjoining fishing grounds, lends itself well to research studies. The area is fished by Ireland and the United Kingdom, with limited effort by France and Belgium, and has been known to be overfished for quite a long time....
Published June 1982. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Seven sites of uniform topography and soil were selected within
a self perpetuating ponderosa pine forest found on the eastern
flank of the central Oregon Cascades. These plots were located along
a vegetational gradient caused mainly by an orographic rain shadow.
Data gathered included density, frequency, and cover for all...
Human alterations to nutrient cycles[superscript 1,2] and herbivore communities³⁻⁷
are affecting global biodiversity dramatically². Ecological theory predicts
these changes should be strongly counteractive: nutrient addition
drives plant species loss through intensified competition for
light, whereas herbivores prevent competitive exclusion by increasing
ground-level light, particularly in productive systems[superscript 8,9]. Here we...
Identification of heterotic groups and patterns among breeding populations provides fundamental information to help plant breeders more knowledgeably manipulate heterosis. A diallel analysis was conducted among nine alfalfa (Medicago sativa L.) germplasms, commonly referred to as African, Chilean, Flemish, Indian, Ladak, M. falcata, M. varia, Peruvian, and Turkistan, which represent...
The critically endangered Maui's dolphin (Cephalorhynchus hectori maui) and the endangered Hector's dolphin (C. h. hectori) are endemic to the coastal waters of New Zealand, where their primary threat is fisheries-related mortality. The Maui's dolphin is among the most critically endangered cetaceans in the world, with its remnant population primarily...
Stream functioning includes simultaneous interaction among solute transport, nutrient processing, and metabolism. Metabolism is measured with methods that have limited spatial representativeness and are highly uncertain. These problems restrict development of methods for up-scaling biological processes that mediate nutrient processing. We used the resazurin–resorufin (Raz-Rru) tracer system to estimate metabolism...
Proceedings of the 62nd Annual Western Orchard Pest and Disease Management Conference, held January 13-15, 1988 at the Imperial Hotel in Portland, Oregon.
Quick and accurate measurements of nanoparticles have important applications in biology, environmental and non-proliferation areas. Calculation of isotopic ratios, particularly in special nuclear materials, has relied on integration of nanoparticle counts and limited the capability of counting minor isotopes. Rapid transient detection method of nanoparticles has demonstrated the effectiveness of...
Lifestyle factors are responsible for a considerable portion of cancer incidence worldwide, but credible estimates from the World Health Organization and the International Agency for Research on Cancer (IARC) suggest that the fraction of cancers attributable to toxic environmental exposures is between 7% and 19%. To explore the hypothesis that...
Relationships between myosin heavy chain (MHC) isoform content and
eccentric-induced damage were investigated in chemically skinned muscle fiber
segments. Fibers were subjected to an eccentric contraction standardized for strain
magnitude (0.25 fiber length) and velocity (0.50 maximal shortening velocity).
Fiber MHC isoform content was identified by SDS-PAGE. Pre- to post-eccentric...
Since nucleic acids were first extracted directly from the environment and sequenced, metagenomics has grown to one of the most data-rich and pervasive techniques for understanding the taxonomic and functional diversity of microbial communities. In the last decade, cheaper sequencing has democratized the application of metagenomics and generated billions of...
Published July 1991. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Revised November 1994. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Thesis research focused on: 1) Water and fertilizer gradients
within the plant root zone, and effects of chemical and physical
gradients on Trichoderma harzianum populations. 2) Regulation of root
growth physically with permeable fabric containers and chemically with
copper compounds. 3) Effects of copper coatings for fabric containers
on Glomus...
This guide provides keys, descriptions, and stand tables for 122 native freshwater plant associations (14 forest and woodland, 28 shrub, 78 herbaceous, 2 nonvascular) in northwestern Oregon, based on analysis of data from 1,992 plots distributed throughout the study area. Descriptions are provided for eight other plant associations for which...
Nalidixic acid and its derivatives act through inhibition of
bacterial DNA gyrase activity. Recently there have been a series of
papers reporting the antibacterial activity against three different
types of bacteria (S. aureus, E. coli and P. aeruginosa) by a series
of 1,4-dihydro-4-oxoquinoline (or 1,8-naphthyridine) 3-carboxylic
acids. Consistent biological data...
Current studies suggest that perfluorinated organic compounds, such as fluorotelomer alcohols (FtOHs) in the troposphere, may be precursors of perfluorocarboxylic acids and perfluorosulfonates in remote regions. Fluorinated organic compounds were investigated in archived extracts collected from remote locations in Okinawa, Japan (HSO) and Mount Bachelor, Oregon (MBO) during the springs...
Groundwater–surface-water (GW-SW) interactions in streams are difficult to quantify because of heterogeneity in hydraulic and reactive processes across a range of spatial and temporal scales. The challenge of quantifying these interactions has led to the development of several techniques, from centimeter-scale probes to whole-system tracers, including chemical, thermal, and electrical...
Behavioral modeling is increasingly an imperative component of system design as the systems under construction become more and more complex. Without behavioral modeling available to the modern designer, design and verification of these systems would be much more laborious. Additionally, with the increasing computational power of today's modeling and simulation...
The relative influences of trans-Pacific and regional atmospheric transport on measured concentrations of polycyclic aromatic hydrocarbons (PAHs), PAH derivatives [Nitro- (NPAH) and Oxy-(OPAH)], organic carbon (OC), and Particulate Matter (PM) less than 2.5 μm in diameter (PM₂.₅) were investigated in the Pacific Northwest, USA in 2010-2011. Ambient high volume PM₂.₅...
The Oregon State University TRIGA® Reactor (OSTR) has a number of irradiation
facilities providing a wide range of neutron energies and fluxes. These facilities include a
pneumatic transfer tube, a rotating rack, a thermal column, four beam ports, in-core irradiation
tubes, a clyogenic gas transfer system and a large vault...
Japanese, giant, and the hybrid Bohemian
knotweeds (Fallopia japonica, F. sachalinensis and
F. x bohemica) have invaded the western USA and
Canada, as well as other regions of the world. The
distribution of these taxa in western North America,
and their mode of invasion, is relatively unresolved.
Using amplified fragment...
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japonica from Central Europe revealed after
AFLP analysis. Flora 207:636–645
Dice L (1945) Measures of
Fire has largely been excluded from many mountain big sagebrush communities. Managers are reluctant to
reintroduce fire, especially in communities without significant conifer encroachment, because of the decline in sagebrush-associated
wildlife. Given this management direction, a better understanding of fire exclusion and burning effects is
needed. We compared burned to...
Studies of experimental grassland communities¹⁻⁷ have demonstrated
that plant diversity can stabilize productivity through species
asynchrony, in which decreases in the biomass of some species
are compensated for by increases in others[superscript 1,2]. However, it remains
unknown whether these findings are relevant to natural ecosystems,
especially those for which species...
Despite renewed interest in the nature of limitations on maximum tree height, the mechanisms governing ultimate and species-specific height limits are not yet understood, but likely involve water transport dynamics. Tall trees experience increased risk of xylem embolism from air-seeding because tension in their water column increases with height due...
An increasing number of studies suggest an important role of host immunity as a barrier to tumor formation and progression. Complex mechanisms and multiple pathways are involved in evading innate and adaptive immune responses, with a broad spectrum of chemicals displaying the potential to adversely influence immunosurveillance. The evaluation of...
The extent of biological invasions, their role on the feeding of
native fishes and their impact on community stability were
investigated in Alsea Bay and Yaquina Bay, two estuaries on the
central Oregon coast, USA. Most nonindigenous species (NIS)
introduced in these intermediately invaded estuaries are
considered byproducts of culturing...
Wood is a major pool of organic carbon that is highly resistant to decay, owing largely to the presence of lignin. The only organisms capable of substantial lignin decay are white rot fungi in the Agaricomycetes, which also contains non–lignin-degrading brown rot and ectomycorrhizal species. Comparative analyses of 31 fungal...
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://www.expasy.org/sprot/), KEGG (20), and KOG (21). KEGG hits were used to assign EC
numbers (http://www.expasy.org
In two studies we tested the effect of vitamin B-6
(B-6) intake on in vitro lymphocyte, proliferation and IL-2
production in healthy young women. In Study I, 6 women were
fed a constant diet containing 0.84 mg (4.96 μmols) of B-6
for 12 d, and 1.24 mg (7.33 μmols) and...
In response to genotoxic stress, ATR and ATM kinases phosphorylate H2A in fungi and H2AX in animals on a C-terminal serine.
The resulting modified histone, called γH2A, recruits chromatin-binding proteins that stabilize stalled replication forks or promote
DNA double-strand-break repair. To identify genomic loci that might be prone to replication...
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localization in Neurospora crassa.
Eukaryotic Cell, 13(8), 990-1000. doi:10.1128/EC.00117-14
10.1128/EC
The relative influences of trans-Pacific and regional atmospheric transport on measured concentrations of polycyclic aromatic hydrocarbons (PAHs), PAH derivatives [Nitro- (NPAH) and Oxy-(OPAH)], organic carbon (OC), and Particulate Matter (PM) less than 2.5 μm in diameter (PM₂.₅) were investigated in the Pacific Northwest, USA in 2010-2011. Ambient high volume PM₂.₅...
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EC/OC analyzer (Sunset Lab, Tigard, OR) was used to analyze for organic 137
carbon (OC) and black
The mold resistance of fiberboard has been studied to provide a basis for recommendations on the relative merits of various types of commercial and of experimental fiberboards. The experimental fiberboards were prepared. by the Division of Pulp and, Paper of the Forest Products Laboratory.
In eukaryotes, RNA silencing pathways utilize 20-30-nucleotide small RNAs to regulate gene expression, specify and maintain chromatin structure, and repress viruses and mobile genetic elements. RNA silencing was likely present in the common ancestor of modern eukaryotes, but most research has focused on plant and animal RNA silencing systems. Phytophthora...
This project examined the information needs of those interested in the planning for marine renewable energy in Oregon. The objective was to recommend to Oregon State University’s Northwest National Marine Renewable Energy Center (NNMREC) an approach to facilitating sharing of relevant information concerning marine renewable energy in Oregon and Washington....
The significance of geology is commonly overlooked by the general public and underrepresented in free-choice learning environments including national parks that exhibit spectacular examples of geological features and processes. Parks are a major contributor to public learning, and a key way to teach how geology influences many aspects of our...
The purpose of this study was to assist the development of an
improved technical teacher education program. Specifically, the
project sought to determine what, if any, factors in the backgrounds
of successful technical teachers may have accounted for their success
in teaching. To provide information to this end, the investigation...
The deglacial behavior of the sub-Arctic North Pacific is poorly constrained, with many published records suffering from limited age control due to extensive post- depositional biogenic carbonate dissolution. Potential alternative dating methods could include the correlation of stable-isotopic and/or paleomagnetic secular variation records to an independently-dated regional template, however no...
Inbreeding of the avirulent physiologic race 8 strains of Ustilago hordei was
purported to have increased its pathogenicity in a stepwise manner that led to a highly
pathogenic race, designated race 14. The analysis of electrophoretic karyotypes and
restriction fragment length polymorphism profiles detected with a telomere-specific probe
(TelomereRFLP) in...
Experiments were done to determine pathogenic variability
and pathogenic adaptation of Septoria tritici to different
wheat cultivars. Fifteen S. tritici isolates from
California, Oregon, and Texas were evaluated on seedlings of
two sets of geographically diverse wheat cultivars under
greenhouse conditions. Significant isolate effects, cultivar
effects, and isolate X cultivar...