Throughput-oriented processors, such as graphics processing units (GPUs), have been increasingly used to accelerate general purpose computing, including machine learning models that are being utilized in numerous disciplines. Thousands of concurrently running threads in a GPU demand a highly efficient memory subsystem for data supply in GPUs. In this dissertation,...
RNA-Sequencing (RNA-Seq) has rapidly become the de facto technique in transcriptome studies. However, established statistical methods for analyzing experimental and observational microarray studies need to be revised or completely re-invented to accommodate RNA-Seq data's unique characteristics. In this dissertation, we focus on statistical analyses performed at two particular stages in...
Antisense oligonucleotide (AO)-mediated exon-skipping therapeutics shows great promise in correcting frame-disrupting mutations in the DMD gene for Duchenne muscular dystrophy. However, insufficient systemic delivery limits clinical adoption. Previously, we showed that a glucose/fructose mixture augmented AO delivery to muscle in mdx mice. Here, we evaluated if fructose alone could enhance...
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Manner in mdx Mice
Limin Cao1,2, Gang Han1, Caorui Lin1, Ben Gu1, Xianjun Gao1, Hong M Moulton3, Yiqi
Antisense oligonucleotide (AO)-mediated exon-skipping therapeutics shows great promise in correcting frame-disrupting mutations in the DMD gene for Duchenne muscular dystrophy. However, insufficient systemic delivery limits clinical adoption. Previously, we showed that a glucose/fructose mixture augmented AO delivery to muscle in mdx mice. Here, we evaluated if fructose alone could enhance...
Antisense oligonucleotide (AO)-mediated exon-skipping therapeutics shows great promise in correcting frame-disrupting mutations in the DMD gene for Duchenne muscular dystrophy. However, insufficient systemic delivery limits clinical adoption. Previously, we showed that a glucose/fructose mixture augmented AO delivery to muscle in mdx mice. Here, we evaluated if fructose alone could enhance...
Diatomaceous soils are a geological material whose engineering properties do not readily conform to the widely accepted and used mechanical and behavioral frameworks. This ambiguity results in design difficulties and geotechnical failures which can be costly. Diatomaceous soils have diatoms in their matrix. Diatoms are unicellular algae with an inert...
The Discrete Cosine Transform is used in many image and video compression
standards. Many methods have been developed for efficiently computing the Discrete
Cosine Transform including flowgraph algorithms, distributed arithmetic and
two-dimensional decompositions.
A new architecture based on distributed arithmetic is presented for computing
the Discrete Cosine Transform and it's...
The Laplace-Beltrami operator of a smooth Riemannian manifold is determined by the Riemannian metric. Conversely, the heat kernel constructed from the eigenvalues and eigenfunctions of the Laplace-Beltrami operator determines the Riemannian metric. This work proves the analogy on Euclidean polyhedral surfaces (triangle meshes), that the discrete heat kernel and the...
In a wireless sensor network, sensor nodes are deployed in an ad hoc fashion and they deliver data packets using multihop transmission. However, transmission failures occur frequently in the multihop transmission over wireless media. Thus, a loss recovery mechanism is required to provide end-to-end reliability. In addition, because the sensor...
Various natural language processing (NLP) tasks necessitate deep models that are fast, efficient, and small based on their ultimate application at the edge or elsewhere. While significant investigation has furthered the efficiency and reduced the size of these models, reducing their downstream latency without significant trade-offs remains a difficult task....
This work presents a new energy saving technique for modern digital designs. We propose Time Interleaved Multi-Rail (TIMR) - a method for providing two dynamic supply rails to a circuit. This technique uses the first supply rail to mask the transition delay while changing the voltage of the second rail....
A distributed system is a network of multiple autonomous computational nodes designed primarily for performance scalability and robustness. The performance of a distributed system depends critically on how tasks and resources are distributed among the nodes. Thus, a main thrust in distributed system research is to design schemes for distributing...
Pile caps are structural elements used to transmit loads from structural columns into pile groups. A pile cap is generally constructed of reinforced concrete and contains only minimal flexural reinforcing steel. Using modern design methods, the anchorage of the flexural steel may limit the design capacity of existing pile caps....
Traditional bus-based interconnects are simple and easy to implement, but the scalability is greatly limited. While router-based networks-on-chip (NoCs) offer superior scalability, they also incur significant power and area overhead due to complex router structures. In this thesis, a new class of on-chip networks, referred to as Routerless (RL) NoCs,...
Energy consumption is one of the primary bottlenecks to both large and small scale modern compute platforms. Reducing the operating voltage of digital circuits to voltages where the supply voltage is near or below the threshold of the transistors has recently gained attention as a method to reduce the energy...
Wireless LANs (WLANs) have been widely adopted and are more convenient as they are inter-connected as wireless campus networks and wireless mesh networks. However, time-sensitive multimedia applications, which
have become more popular, could suffer from long end-to-end latency in WLANs.
This is due mainly to handoff delay, which in turn...
In the highly alkaline environment of concrete, carbon steel rebar is protected against corrosion by a passive oxide/oxyhydroxide film. Understanding the characteristics of this passive film, and how it depassivates, is the key for mitigating problems associated with steel corrosion in concrete. Although a large number of electrochemical and analytical...
Dynamic CMOS circuits are commonly used in high-performance memory arrays to implement wide-NOR logic functions for their read and search operations. This is because dynamic circuits have significantly higher speed and lower area compared to static circuits for performing similar operations. Register File (RF) arrays are located at the top...
Drunk driving continues to be a national, state, and
local problem in spite of recent changes in laws governing
drinking and driving. Driving under the influence of
intoxicants (DDII) has been judged to be responsible for
approximately one-half of all traffic related deaths
nationally, killing 25,000 Americans and injuring 700,000...
This work explores the electric field induced strain mechanisms in environmentally benign Bi0.5Na0.5TiO3 (BNT) based piezoelectric thin films. Although BNT-based materials show promise as replacements for toxic Pb-based piezoelectrics, the displacement mechanisms are not consistent between thin films and bulk materials, and the differences have yet to be well understood....
Machine learning applied to computer architecture has rapidly transitioned from a theoretical novelty to being a driving force behind design, control, and simulation in practically all components. These machine-learning-based methodologies are further notable for their scalability to increasingly complex design challenges, which has allowed these methodologies to surpass the prior...
Anchoring systems are used to hold floating offshore devices (e.g., energy devices, oil platforms) to keep them on their stations. Anchors are embedded into the seabed soils. In some cases, the interface shear between anchor and seabed soils together with anchor self-weight provide the holding capacity of the anchoring systems....
Seismically-induced liquefaction represents a major cause of damage to civil infrastructure and can result in significant damage following major earthquakes. Liquefaction can occur when earthquake ground motions raise pore-water pressures in loose, sandy soil, resulting in a substantial decrease of soil strength. Owing to the potential for instability following liquefaction,...
The mitigation hierarchy is a decision-making framework designed to address impacts on biodiversity and ecosystem services through first seeking to avoid impacts wherever possible, then minimizing or restoring impacts, and finally by offsetting any unavoidable impacts. Avoiding impacts is seen by many as the most certain and effective way of...
Marine Team is a student effort to examine spatial and temporal variation of fish species within Yaquina Bay. Marine Team was developed at OSU as a seminar course with a field sampling component, to help students of marine ecology get “hands on” experience with data collection and analysis. We set...
A substantial fraction of estuarine tidal wetlands have been lost to development or other human uses in the Pacific Northwest since the 1800s. Wetland restoration, typically through tidal re-connection, can restore normal tidal hydrology to these areas and improve estuarine capacity to support ecosystem functions and services. Restoration may initiate...
This thesis explored the factors that influence members expression of hypermasculine behaviors in fraternity organizations serving male-identified students at a predominately White university in a predominately White state in the Pacific Northwest region of the United States of America. Utilizing the Auburn Differential Masculinities Inventory, this quantitative approach focused on...
Forest certification—or, as it is sometimes called, green certification—aims to identify forestland that is managed to meet agreed-upon standards and, sometimes, to label products originating from those forests. The underlying goal of forest certification is to promote forest practices that are environmentally, socially, and economically sustainable over the long term....
Simultaneous translation, which translates concurrently with the source language speech, is widely used in many scenarios including multilateral organizations. However, it is well known to be one of the most challenging tasks for humans due to the simultaneous perception and production in two languages. On the other hand, simultaneous translation...
A toolkit for farmers, Extension agents, community organizers, and other agricultural professionals interested in starting and maintaining a successful farmer network. The publication is divided into two sections: an instruction guide (with information on establishing, promoting and managing a farmer network) and a toolbox (with tips, examples, case studies, and...
Earthquake engineering analyses are often performed using shallow, crustal earthquake motions (e.g., 1940 El Centro). However, large areas of the world are subject to subduction zone earthquake motions (e.g., the Pacific Northwest). A subduction zone earthquake motion is characterized by its long duration (e.g., strong shaking lasts for more than...
In this work we consider a model for pattern-producing vegetation in semi-arid regions of the world proposed by Klausmeier. It is a coupled nonlinear diffusion-advection evolutionary PDE system describing the vegetation density and water amount. The model was studied extensively by J.Sherratt who took into consideration the field data for...
Successful pruning relies on accurately identifying the 3D structure of tree branches and leaders. However, this task is arduous in an agricultural setting due to the complexity of scenes, the presence of clutter, and variable weather conditions. This project addresses these challenges by leveraging advancements in 2D image segmentation and...
Structure-forming invertebrates belong to a polyphyletic group of primarily sessile and sedentary megafauna that can significantly enhance the complexity of physical habitats. A number of these organisms, including cold-water corals and sponges, are known to be slow growing and vulnerable to physical disturbance. In addition, as filter feeders, these invertebrates...
Groundwater–surface-water (GW-SW) interactions in streams are difficult to quantify because of heterogeneity in hydraulic and reactive processes across a range of spatial and temporal scales. The challenge of quantifying these interactions has led to the development of several techniques, from centimeter-scale probes to whole-system tracers, including chemical, thermal, and electrical...
ROP GTPases are crucial regulators of pollen tube growth. The Rop GTPase family in maize consists of nine known rop genes, ropl-rop9. A subset of these genes (rop2, rop8, and rop9) are expressed in pollen. The rop2 and rop9 genes are a highly conserved duplicate gene pair of ancient origin....
Seafood, defined here as marine and freshwater fish and shellfish, is recognized as a healthy food choice because it is a low-fat protein source that provides long-chain omega-3 fatty acids important for early development along with eye and heart health. However, seafood is also known to contain certain contaminants, such...
The most interesting study connected with the
development of the American novel is the accompanying
feature of the growth of the country itself. In a
certain way the changes seem peculiar, but in another
way they are exactly what we might be led to expect.
In tracing the development from...
Chemical stains that develop on commercial woods are
problems of great economic importance. The polyphenol
oxidases catalyze the oxidation of the phenolics that
naturally exist in plants to quinones when the cell structure is disrupted. The quinones produced are further
oxidized and polymerized to melanin, the pigment which is
responsible...
Gene expression profiles of tissues and cell-lines can be powerful tools for documenting the genetic response to a particular treatment, such as stressors. However, there is a paucity of information on the genetic stress response in the brain. Therefore, we attempted to profile gene expression in the brain of juvenile...
Pesticides—including insecticides, acaricides, fungicides, and bactericides are essential for maintaining healthy crops with reliable yields and quality. In many instances, pesticides have become less effective as target organisms have developed resistance. The first record of resistance dates to 1897, when orchardists began having problems controlling San Jose scale (Quadraspidiotus perniciosus...
This publication is offered as a reference to Integrated Pest Management (IPM) resources available to Oregon growers. It highlights university, federal, state, and private services and resources that provide support to growers in the implementation of IPM programs. The Guide consists of five sections: • An introduction to the National...
An important factor affecting the strength and ultimate load of wood structures is the strength, stiffness and durability of its joints. Therefore, the behavior of nailed joints must be given proper consideration when designing and analyzing wood structures. Presently,formulas for determining the strength of nailed joints under withdrawal loads, as...
In this thesis, A nonlinear methodology for the control of the highly
maneuverable, high performance aircraft HARV (F-18) is studied by using sliding-mode
control (SMC). This control law, which takes a continuous function when the
input constraints are not considered, satisfies the reachability condition by which
concerned states are driven...
The overall focus of this thesis is on the distribution of specific lipids and membrane proteins of the external and internal membranes of plant cells, in the context of the roles that those lipids and proteins may play in microbe-plant interactions. The work includes the development of several new tools,...
There is significant interest in the fabrication of nano- and micro-structured silica with spatially ordered features, which exhibit enhanced optoelectronic properties with application to the next generation of display devices, semiconductors, and sensors. Currents methods of fabrication employ top down processes which use extremes of temperature, pressure, and power. There...
This report includes information concerning experimental use of unregistered pesticides or unregistered uses of pesticides. Experimental results should not be interpreted as recommendations for use. Use of unregistered materials or use of any registered pesticides inconsistent with its label is against both Federal Law and State Law.
Part 1:
White muscle disease (WMD), a degenerative muscle disease brought on by a deficiency of the essential trace nutrient selenium, is thought to be mediated by the protein Selenoprotein W (SeW). In its relationship with WMD, SeW, like many selenoproteins, binds to glutathione, serving some purpose in redox mechanisms...
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. Natl. Sci. USA 92, 8749-8753.
Gu Q.P., M.A. Beilstein, S.C. Vendeland, W. Lugade, L.W. Ream, P.D
Part 1:
White muscle disease (WMD), a degenerative muscle disease brought on by a deficiency of the essential trace nutrient selenium, is thought to be mediated by the protein Selenoprotein W (SeW). In its relationship with WMD, SeW, like many selenoproteins, binds to glutathione, serving some purpose in redox mechanisms...
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Dr. Rick Sheri
Dr. Ben Figard
Dr. Kevin Marley
Dr. Phillip Whanger
Mrs. Judy Butler
Mrs. Wanda
Published March 1939. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Besides enabling an enhanced mobile broadband access, fifth-generation (5G) wireless mobile networks are envisioned to support the connectivity of massive, heterogeneous Internet of Things (IoT) devices. Connecting these devices through 5G systems and providing them with their needed data rates require huge amounts of spectrum and power resources, thus calling...
Published June 1983. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
We hypothesized that vitamin E (α-tocopherol) is required by the developing embryonic brain to prevent depletion of highly polyunsaturated fatty acids, especially docosahexaenoic acid (DHA, 22:6), the loss of which we predicted would underlie abnormal morphological and behavioral outcomes. Therefore, we fed adult 5D zebrafish (Danio rerio) defined diets without...
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, Prostaglandins Leukot. Essent. Fat. Acids 92 (2015) 63–65.
[18] A. Ben-Zvi, B. Lacoste, E. Kur, B.J. Andreone, Y
The perhumid coastal temperate rainforests of southeast Alaska contain an abundance of soil organic carbon (SOC) that has accumulated in a wet, cool climate where forest fire disturbance is minimal and organic matter decomposition rates are low. Coastal temperate rainforests are supported by carbon-rich soils that provide ecosystem services including...
Greater sage-grouse (Centrocercus urophasianus), a sagebrush obligate species, has contracted in extent by nearly half its original distribution. This is primarily due to habitat loss and degradation over the past 150 years. During winter, sage-grouse depend completely on sagebrush habitat for food and cover, yet sage-grouse winter ecology has been...
Pesticides, including insecticides, acaricides, fungicides, bactericides, and herbicides are essential for maintaining healthy grape crops with reliable
yields and quality. In many instances, pesticides have become less effective as target organisms have developed resistance. The first record of resistance dates to 1897, when orchardists began having problems controlling San Jose...
Pesticides—including insecticides, acaricides, fungicides, and bactericides are essential for growing healthy crops with reliable yields and quality. In many instances, pesticides have become less effective as target organisms have developed resistance. The first record of resistance dates to 1897, when orchardists began having problems controlling San Jose scale (Quadraspidiotus perniciosus...
The upper ocean current and temperature fields in the western Weddell Sea were measured from the drifting pack ice at Ice Station Weddell 1 (ISW) and nearby sites using a vertical profiler and an array of moored sensors in January–June 1992. These data document the structure and variability of the...
The Va nationality, despite its small population compared
to other nationalities in China, has preserved most of its
traditions largely due to limits placed by historical
circumstances and geographical isolation. To non-Chinese
anthropologists, the Va people still remain unknown, as there
is little or no information about them in English...
Microalgae has been under careful consideration as a sustainable feedstock for renewable fuel recently due to its year round production with high energy yields per unit area, reduced need for arable land, water treatment benefits with nutrient cycling, and minimal competition with the food industry. Despite of all these advantages,...
Biodiversity continues to decline in the face of increasing anthropogenic pressures such as habitat destruction, exploitation, pollution and introduction of alien species. Existing global databases of species’ threat status or population time series are dominated by charismatic species. The collation of datasets with broad taxonomic and biogeographic extents, and that...
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. Cleary63, Stuart P. Connop64, Biagio D’Aniello65, Pedro Giovâni da Silva66,
Ben Darvill67, Jens Dauber68
The significance of geology is commonly overlooked by the general public and underrepresented in free-choice learning environments including national parks that exhibit spectacular examples of geological features and processes. Parks are a major contributor to public learning, and a key way to teach how geology influences many aspects of our...
We are witnessing the rise of the data-driven science paradigm, in which massive amounts of data - much of it collected as a side-effect of ordinary human activity - can be analyzed to make sense of the data and to make useful predictions. To fully realize the promise of this...
During the summer of 2016, Oregon State University conducted preliminary excavations of the hospital at Fort Yamhill, Oregon (35PO75). Fort Yamhill (1856-1866), has long been a focus of OSU’s field schools, offering glimpses into garrison life through the eyes of the officers and the enlisted men. However, up until recently,...
Recognizing human actions in videos is a long-standing problem in computer vision with a wide range of applications including video surveillance, content retrieval, and sports analysis. This thesis focuses on addressing efficiency and robustness of video classification in unconstrained real-world settings. The thesis work can be broadly divided into four...
Microbial ecology has been transformed by metagenomics, the study of the genetic in-formation in entire communities of organisms. In the following we develop metagenomic tools arising from the classic Wasserstein metric as applied to questions regarding the diversity between microbial communities. We provide a novel proof of the characteriza-tion of...
Gender relations as well as the social situation of Manchu women have long been ignored in studies of the cultural evolution of the Manchu. By setting the discussion of Manchu women in the context of cultural adaptation, this study reintroduces gender and women's problems into the research on the Manchu...
Dispersing hydrophilic nanofillers in highly hydrophobic polymer matrices is widely used to tune the mechanical properties of composite material systems. The ability to control the dispersion of fillers is closely related to the mechanical tunability of such composites. In this work, we investigate the physical–chemical underpinnings of how simple end-group...
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References 471
(1) Azouz, K. Ben; Ramires, E. C.; Van Den Fonteyne, W.; El Kissi, N.; Dufresne, A. ACS
FragariaCyc is a strawberry-specific cellular metabolic network based on the annotated genome sequence of Fragaria vesca L. ssp. vesca, accession Hawaii 4. It was built on the Pathway-Tools platform using MetaCyc as the reference. The experimental evidences from published literature were used for supporting/editing existing entities and for the addition...
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Plant Science | www.frontiersin.org 1 March 2016 | Volume 7 | Article 242
Edited by:
Aaron Fait,
Ben
We investigated DNA methylomes of pediatric B-cell
acute lymphoblastic leukemias (B-ALLs) using
whole-genome bisulfite sequencing and high-definition
microarrays, along with RNA expression
profiles. Epigenetic alteration of B-ALLs occurred in
two tracks: de novo methylation of small functional
compartments and demethylation of large intercompartmental
backbones. The deviations were exaggerated
in lamina-associated...
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., Keshet,I., Farkash,S., Hecht,M.,
Zimmerman,J., Eden,E., Yakhini,Z., Ben-Shushan,E.,
Reubinoff,B.E. et al
Published January 1929. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Published March 1920. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
The human intervertebral disc is a deceptively simple structure which plays an essential role in human movement. Even slight changes to the disc microenvironment can have far reaching consequences, particularly when these changes result in disc degeneration and herniation. Degeneration is increasingly tied to lower back pain; better understanding this...
With growing concerns on environment impact of industrial product development, the product developers are seeking better solutions to achieve desired environmental benign requirements by the regulators and customers besides economic growth. During the last decade, some of the most successful product development companies (such as HP) have established their own...
Here we investigate sedimentary records from four small inland lakes located in the southern Cascadia forearc region for evidence of earthquakes. Three of these lakes are in the Klamath Mountains near the Oregon–California border, and one is in the central Oregon Coast range. The sedimentary sequences recovered from these lakes...
The intriguing size- and shape dependent properties of nanoparticles have garnered recent attention in many science and engineering areas. When the particle size is in the nanometer size range, the material exhibits very different properties such as surface plasmon resonance (of gold nanoparticles) and superparamagnetism (of iron oxide nanoparticles). The...
The effects of a school-based social-emotional and character development program, Positive Action, on the developmental trajectory of character development was evaluated using data from three randomized trials. Results come from 1) 4-years of data from elementary children in 20 Hawai`i schools, 2) 3-years of data from elementary children in 14...
As robots are becoming more relevant to our lives, they are still having hard time accomplishing simple tasks such as picking and lifting. Problems that include environmental constraints, pose uncertainties and hardware noises restrain robots for grasping an object successfully from a perceivable environment. Many have looked into finding best...
Sub-Saharan Africa (SSA) experiences soil degradation, food and livelihood insecurity, environmental pollution and lack of access to energy. Biochar has gained international research attention, but few studies have investigated the potential of biochar to address the challenges in SSA. This paper seeks to identify and evaluate generic potential opportunities and...
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., 2009), Europe (Verheijen et al., 2009), India (Singh and
Gu, 2010) and elsewhere (Glaser et al., 2002
Drosophila suzukii (Matsumura) (Diptera: Drosophilidae) is a pest of small fruits and cherries, and has also been noted to infest a variety of wild, ornamental, and uncultivated hosts. Identifying alternative hosts is critical for pest management. Research objectives were to: 1) survey fruits in the field for natural infestation of...
Published June 1985. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Unlike other biosensing, electrochemical biosensor has the advantages of robustness, easy miniaturization, excellent detection limits, and capability in handling small analyte volumes. The detection selectivity of the electrochemical biosensors is mainly supported by bioreceptors. However, these receptors always suffer from the performance variation caused by the environment and the thermal-...
Transportation systems are facing safety and operational challenges with a cost of billions of dollars annually in lost production time and wasted fuel. Infrastructure expansion, previously held as a panacea to most transportation challenges has lost its appeal due to financial, land-use and environmental constraints. Interest is surging in intelligent...