The resurgence of creationism the past few years has been led by advocates
of recent-creationism. These individuals, a minority among creationists in general,
argue that the entire universe was created approximately 10,000 years ago in one six-day
period of time. Recent-creationists support their position by appealing to the
Genesis account...
A quadratic programming method was developed for the statistical
analysis of gas chromatographic data. The method was applied to
three types of flavor extracts, peppermint, hops and brewed tea. The
brewed tea data had to be abandoned because of the singularity of its
coveriance matrix. In all cases tried the...
Design in secondary mathematics teacher education must prepare teacher candidates to do the work of ambitious and equitable mathematics teaching with skill by situating development in the work of teaching and incorporating opportunities to investigate and enact teaching. Teacher education designs must also be responsive to the work that mathematics...
As part of the continuing investigation of the thermal cis- 1, 3, 5-hexatriene to 1,3-cyclohexadiene rearrangement, four new trienes and a cross-conjugated pentaene have been prepared and their thermal reactions studied. A new route to the synthesis of highly substituted trienes has been developed. The synthesis of three of these...
Issues of injustice in society (e.g. racism, classism, sexism, ableism) are perpetuated in and through educational opportunities, including mathematics learning (Freire, 1970/2000). Those that are committed to disrupting the interlocking systems that create disparities and oppression in mathematics education are considered to be “pursuing justice.” Pursuit of justice can involve...
This thesis documents a period of ecological and cultural change on a Willamette Valley, Oregon landscape. In particular, this study examines the Peavy Arboretum area and the cultural changes that accompanied the transformation of the landscape from an oak savannah in the mid-nineteenth century to a dense Douglas-fir forest in...
This thesis examines prehistoric land use patterns of the entire North Santiam subbasin, located on the western slopes of the Oregon Cascade Range. The objective of this analysis is three-fold: 1) to contribute to reconstructing the cultural chronology of the area; 2) to address the use of raw material by...
Headwater streams are an integral part of the ecological health of the greater stream network as they provide valuable biological habitat, provide upwards to 95% of total in channel flow, while providing downstream reaches with important constituents such as sediment and woody debris. Small headwater streams are particularly susceptible to...
In this dissertation I explore the Arms representation and activities for teaching quantum mechanics invented at Oregon State University. In the Arms representation students embody quantum states. The Arms activities are presented as an exemplar of the unique physics classroom culture of the upper-division Paradigms in Physics program. In the...
Modified ride-on cars (ROCs) offer children with disabilities access to independent mobility. Aims: 1) To examine the association between caregiver attitudes towards self-directed mobility, caregiver alignment with the medical and social models of disability, and total modified ROC driving time; 2) To compare caregiver attitudes towards self-directed mobility, caregiver alignment...
This thesis merges the fields of Ecology and Anthropology by applying Habitat Suitability Modeling to the relationship between people and plants in the Pacific Northwest. In it, I create and optimize two Maxent habitat suitability models for camas (Camassia spp.) in Oregon. The first model describes the physical environment of...
There is a considerable amount of vacant land
zoned for industrial use within the Corvallis Urban Growth
Boundary. A detailed investigation of the area reveals
a total of 632.98 acres of such land. However, when closely
scrutinized, it appears that the total number of acres is
misleading, as only 77.50...
Some evidence suggests a connection between outdoor recreation participation and
stronger environmental worldviews. This study finds little evidence supporting
participation in outdoor recreation activities and stronger environmental worldviews and
some evidence supporting a weak connection between appreciative outdoor recreation
and stronger environmental worldviews. Additionally, the study documents greater
participation in...
The pathogenicity of A. flavus on alkali bee larvae was studied
using sample materials from three nesting sites of these soil
inhabiting bees along the Oregon-Washington state line. Soil
saprophytes of the biosphere of the alkali bee were also studied.
Field observations and direction of soil cores from bee beds...
Geochemical characterization methods are commonly used in the reconstruction of prehistoric raw material use and procurement systems. Trace element studies of lithic source material and artifacts, specifically those made of obsidian, can reveal important information about the environmental and cultural factors which influence the prehistoric distribution of raw material. The...
The prehistory of Central Oregon is explored through the examination of six archaeological sites and two isolated finds from the Upper Deschutes River Basin. Inquiry focuses on the land use, mobility, technological organization, and raw material procurement of the aboriginal inhabitants of the area. Archaeological data presented here are augmented...
The purpose of this research was to see if there were technological differences in ground stone manufacturing and use from a single site that had been occupied for over 600 years, A.D. 550-A.D. 1150, and had multiple occupations that evolved over time (Late Pithouse Phases, Georgetown, San Francisco, and Three...
Little is known about the virulence factors of Renibacterium
salmoninarum, the causative agent of salmonid bacterial kidney disease.
The predominant protein produced by R. salmoninarum in broth culture or
during infection is a 57/58 kDa protein (p57) which is associated with strain
virulence. In this study monoclonal antibodies (MAbs) to...
In this thesis, stature reconstruction of three prehistoric/protohistoric Native American populations (from Alaska, the Aleutian Islands, and South Dakota) was performed using the Fully Anatomical method in order to formulate regression equations and analyze the ability of regression equations of other researchers to accurately estimate the statures within my study...
Pacific harbor seals (Phoca vitulina richardii) are one of Oregon’s most common coastal predators, numbering between 10,000 and 12,000 individuals (Brown et al. 2005b). They consume more than 149 species or types of marine prey within the Pacific Northwest, which include a large variety of commercially important fisheries species. Despite...
University supervisors are critical to improvement in K-12 teaching and learning due to their roles in designing field experiences, managing relationships, mentoring, and supervising teacher candidates. The encouragement, support, and feedback shared by university supervisors in respect to the teaching performance of teacher candidates is especially powerful, and is a...
An ice cover which progrades over a shallow ocean in the form
of an ice front may induce a baroclinic flow in the underlying water,
provided that the brine excluded from the freezing surface layer is
mixed rapidly through out the underlying water column. A series of
models are developed...
This study compares the results of a contingent valuation (CV) mail survey and the voting outcome of a bond measure to fund improvements, through property tax increases, to a downtown park and adjacent riverbank in Corvallis, Oregon. In addition to asking survey respondents about their voting decision, respondents are presented...
Franz Boas collected anthropometric data on approximately 15,000 people from over 200 Native American tribal groups between 1888 and 1902. Twelve basic measurements were taken: standing height, shoulder height, height to digit III, arm span, sitting height, shoulder width, head length and width, face height and breadth, and nose height...
The purpose of this study was to: (a) determine the design features of the physical learning environment that support and enhance collaborative, project-based learning at the community college level; and (b) to gain an understanding of the rationale for the selection of the features. The characteristics of the physical environment...
Academic success is a salient domain of youth development and is related to positive lifelong outcomes among youth in foster care. However, youth in foster care experience compounding adversities, including maltreatment and foster care placement itself, which put them at risk of academic disengagement and underachievement. Despite these adversities, academic...
Paraprofessional counselors comprise a significant sector of the mental health workforce (Buchbinder, 2003; Golden, 1991; Nieuwsma et al., 2014; Norcross, 2000). Professional counselors have offered both praise (Durlak, 1979) and criticism (Nietzel & Fisher, 1981) for paraprofessional counselors and the services that they provide. Paraprofessional counselors work under the guidance...
This dissertation presents the results of a research effort conducted to better understand the seismic performance and analysis of pile-supported wharves. Given the limited number of well-documented field case histories, the seismic performance of pile-supported wharves has been poorly quantified, and the analysis methods commonly employed in engineering practice have...
Oligotrophic bacteria are adapted to low nutrient concentrations. As most of the ocean is oligotrophic (low in nutrients), oligotrophic bacteria thrive in the ocean and make up the majority of planktonic cells. Because of this, oligotrophs are crucial to oceanic nutrient cycles. However, marine oligotrophic bacteria are dwarfed by their...
Immunotaxonomic studies have largely been based
on serology in which either one of two parameters has
been used for establishing relationships: (1) the number
of precipitin arcs formed on Ouehterlony plates, or
(2) the total amount of precipitin resulting from
reactions with a standard antiserum.
Recognizing the restrictions of both...
The study of diffusion coefficients of n-alkanes and other organic compounds in silicones is undertaken by gas-liquid chromatography. About 0. 3% of stationary phase is coated on glass bead support so that the only significant source of peak spreading is due to slow liquid phase mass transfer. Diffusion coefficients are...
Renibacterium salmoninarum produces bacterial kidney
disease (BKD) in salmonid fish. Soluble antigen(s) (SA) produced
by the bacterium was characterized by physicochemical,
functional and immunological methods. The molecular weight
determination by SDS-PAGE analysis of SA yielded 14 different
molecular weight species. Seven of these species were
prominent, 57 kd protein being...
Belowground carbon (C) storage and quality of soil organic matter (SOM) in
forest soils have implications for sustainable forest management and C sequestration,
but how these pools change in response to management is poorly understood. I
investigated whether fertilization and competing vegetation control, applied alone or
in combination early in...
The seismic performance of port structures has been well documented following
recent earthquakes, and indicates that port structures are highly susceptible to earthquake-induced
damages. These damages are primarily due to soil liquefaction and the associated
ground failures. Sheet pile bulkheads provide vital intermodal and lifeline transportation
links between water-side and...
A better understanding of grass seed crop and soil fertility is necessary to
improve fertilizer practices and preserving water quality in Willamette Valley,
Oregon, where 55% of land-use is in grass seed production that directly impacts
adjacent waterways containing native protected fish species. I determined tillage
effects on soil N...
The objective of this project was to use ribosomal RNA genes, cloned
from natural populations of Sargasso Sea bacterioplankton, as markers for
picoplankton diversity. It is widely recognised that a majority of
microorganisms have yet to be cultivated, and therefore much of extant
microbial diversity remains unknown (50). The method...
Recent experience demonstrates that waterfront structures are vulnerable to
earthquake damage. The poor seismic performance of these facilities has been
primarily due to liquefaction of backfill and/or foundation soils and the lack of
seismic design standards for waterfront structures. The seismic performance of
waterfront structures is a key issue in...
Ten helminth-free sheep were given two doses of 10,000,
X-irradiated, H. contortus, third stage larvae 30 days apart. These
animals and a group of ten non-vaccinated sheep were challenged
with 50,000, normal, H. contortus, third stage larvae 60 days
following the second vaccination. Antibody levels were measured
in both groups...
The study provides the details of the ethology of Megachile rotundata
(Fabricius), and presents preliminary observations on its
foraging and nesting behavior. Development from prepupae to adults
proceeds most rapidly at 32 degrees C., and is retarded when held
at lower and higher temperatures.
Male behavior is distinct from that...
We describe a series of novel computational models, CERENKOV (Computational Elucidation of the REgulatory NonKOding Variome) and its successors CERENKOV2, CERENKOV3, and Convolutional CERENKOV3, for discriminating regulatory single nucleotide polymorphisms (rSNPs) from non-regulatory SNPs within non-coding genetic loci. The CERENKOV models are designed for recognizing rSNPs in the context of...
The thermal regime of rivers plays a key role in aquatic ecosystem health. In the Willamette River, OR, the present day main channel temperature is often too warm for cold water fishes during the late spring, summer, and early fall. At these times, cold water fishes tend to be concentrated...
:
______________________________________________________________________________
Stephen T. Lancaster
The thermal regime of rivers plays a key role in aquatic ecosystem
The cyclic resistance of predominantly fine-grained soils has received considerable attention following ground and foundation failures at sites underlain by silt-rich soils during recent earthquakes. In several cases substantial ground deformation and reduced bearing capacity of silt soils has been attributed to excess pore pressure generation during cyclic loading. These...
The gamma contribution to reactor afterheat
depends on gamma energy since high-energy commas are
more likely to escape from tilt. fuel. The objective of
this work is to investigate the gamma-energy spectrum
of a pure U-235 fission reactor.
Fission-product nuclides are first listed in order'
of importance as contributors to...
Ph.D. candidate Qi Wei's thesis consists of two projects: Chemotherapy Project: a study based on the research paper "Predicting chemotherapy response of various cancer types using a variational auto-encoder approach" submitted to the bioRxiv preprint archive and accepted by the BMC bioinformatics; and Wound Monitor Project: implementing and assessing analytics...
Bedrock meandering rivers are sinuous channels that pair steep bedrock outside banks with lower gradient slip-off slopes on the inside of bends. These rivers have the potential to record information on climatic and tectonic “external” forcings in their morphology (e.g., longitudinal profiles, strath terraces, channel and valley dimensions). However, geology...
The purpose of this study was to document the initial change in vegetative canopy cover
following winter seismic exploration on the North Slope of Alaska. The study conducted herein
focuses solely on the impact to wet sedge meadow vegetation.
The overarching goal of this study is to contribute some level...
Epiphytic diatom assemblages in the intertidal zone of Yaquina
Bay and estuary were obtained from the following host macrophytes:
Zostera marina, Fucus evanescens, and species of Enteromorpha,
Polysiphonia, and Ulva. Samples were collected in September 1970
and in January and May 1971 from seven stations approximately evenly
spaced between the...
Understanding mathematics and teaching mathematics involve
numerous factors, one of which may be an individual's spatial ability.
This paper examines research conducted on the relationship between
spatial abilities and mathematics, gender differences in the area of
spatial ability, the types of experiences that may affect one's spatial
ability, and issues...
This thesis presents a method for determining the
kinematic geometry of arthropod legs. A kinematic
description makes possible the analysis of arthropod leg
motion, as a prelude to investigating how various arthropod
species are able to negotiate diverse terrains. Such
knowledge will aid in design of legged vehicles.
The focus...
The testes of the gray-tailed vole (Microtus canicaudus Miller) exhibited a high affinity for selenium relative to other selected tissues. Uptake of selenium-75 in the testis-epididymis complex was delayed relative to uptake by the whole body, kidney, and liver. This pattern of uptake suggested that selenium was metabolically incorporated into...
The engineering design process and the advancement of future computer-aided-design systems need new design aids to be used during the conceptual design phase. This design phase is where information gathering and understanding of the problem are developed, analyzed and broken into small more manageable elements. These elements consist of customer...
Recent work has shown humanoid robots with spinal columns, instead of rigid torsos, benefit from both better balance and an increased ability to absorb external impact. Similarly, snake robots have shown promise as a viable option for exploration in confined spaces with limited human access, such as during power plant...
Invasive plant species are expanding and transforming vegetative communities across Oregon and throughout the United States. Over the past three decades remote sensing, geographic information system (GIS), and Global Positioning System (GPS) technologies have been integrated to detect and map the distribution of noxious rangeland plants. This study developed low-cost...
Abraham Heschel wrote that a philosopher's primary task was not merely to describe and judge the modes and facts of actual human behavior, but also to examine and understand the meaninq of those descriptions and judgements of modes and facts (Bella, 1978). Our values are critically tied to our structures...
Epidemiological research on HIV/AIDS seeks to determine at-risk populations not reached by current care. In the forty years since the AIDS epidemic began, transgender people were only recently deemed “at-risk” by the CDC and more action was taken to study them. Most current research centers on transgender women, with transgender...
Excavations performed at the historic Smith House (ORYA3) located in
Dayton, Yamhill County, Oregon, recovered a large collection of artifacts. Categories
of artifacts previously analyzed include flat glass, nails, glass containers, ceramic
hollowware and flatware, brick, bone, metal containers, illumination devices,
currency, footwear, tobacco, and lead balls, shot, and cartridge...
Cutaneous melanoma remains the deadliest form of skin cancer, with a
diagnosis of metastasis indicating a median survival rate of less than a year. Solar ultraviolet (UV) radiation, especially childhood sun exposure, is an important etiological risk factor of melanoma. Previous studies determined that mice selectively lacking the nuclear hormone...
This thesis presents the results from Monte Carlo calculations on classical vector spins in
face-centered-cubic (FCC) lattices. The goal of the study was to understand the effect of
interlayer coupling, dilution of magnetic atoms in the lattice, and symmetry-changing
strain.
Experimental work by T. M. Giebultowicz et al. and J....
Designing A Citizen Involvement Program presents a model and supportive materials that can be used to design and implement a program for involving citizens in decision-making that concerns significant environmental issues. These actions might be large-scale construction projects, such as building a dam, an electric power plant, or a nuclear...
Base-pairing interaction are the fundamental blocks of an RNA structure. With increased ability to determine the structure of RNA molecules, an accurate and informative way of classifying these interactions would help to study RNA structure at many levels. Apart from the well-known complementary base pairs and wobble pairs, other interactions...
_____________________________________________________________________
Stephen Ramsey, Committee Member, representing the Department of Biomedical
Sciences and the
Runoff from agricultural lands into Upper Klamath Basin rivers and lakes can
cause water quality problems affecting fish and wildlife. Excessive eutrophication
in Upper Klamath Lake is linked to high nutrient input (particularly phosphorus)
stemming from both lake sediments and watershed tributaries.
On a unit area load basis the Wood...
This study examined how annual bedload export volume and bedload characteristics were related to disturbances including logging, floods, debris slides, and wildfires over 48 to 65-year periods in small, steep catchments in conifer forests of the western Cascade Range, Oregon. Bedload – the material rolling, sliding, or saltating along the...
As dams approach the end of their useful life, there is need to predict where and how accumulated sediment will move following their removal to estimate impacts on aquatic habitat and infrastructure. Flume studies suggest that sediment pulses disperse in place for most dams, but it is hypothesized that a...
Currently little is known about the mechanisms and locations of
lymphocyte development in teleosts. In this study several aspects of the
underlying factors which govern B lymphocyte development in trout
were investigated which included: the isolation and characterization of
immunoglobulin heavy chain (IgH) genes, the recombination activating
genes 1 and...
Riparian ecosystems, through their unique positions in the agricultural landscape, have the potential to mitigate nutrient loading to streams. This study was conducted to gain a better understanding of N cycling in a poorly drained Grass Riparian Zone (GRZ) and adjacent Perennial Ryegrass seed Field (PRF) in the Willamette Valley,...
Few studies have directly compared denitrifying community composition and activities in soils by coupling molecular-genetic techniques and traditional measures of denitnfication. I investigated communities of denitrifying bacteria from adjacent meadow and forest soils in the Cascade Mountains, Oregon. A key gene in the denitrification pathway, N₂O reductase (nosZ), served as...
A method based on fatty acid (FA) analysis is used to profile microbial community structure (MCS). Various extraction protocols are available, which alter the types of FAs extracted from soils. The more time consuming but widely used protocol extracts only FAs from phospholipids (PLFA). This technique is desirable because PLFAs...
Snow water equivalent (SWE) is a critical measurement in hydrology and water resources management. Microwave remote sensing can estimate snow water equivalent (SWE). However, the algorithms used to estimate SWE require snow grain size information. Thus, determining snow grain size is pertinent to estimate SWE. Currently, there are several models...
This study examined two neighborhoods in San Francisco with similar earthquake-induced ground failure history -- the Marina District and the South of Market Area (SoMa) -- in the aftermath of the 1989 Loma Prieta earthquake. The earthquake struck shortly after 5 pm on October 17th, 1989 and registered 6.9 in...
Stream restoration techniques in western Oregon and Washington include
physical habitat restoration and more recently the addition of salmon carcasses to
improve food availability for juvenile fish. Although both are common practices, few
studies have examined the effects of carcass placement and the interaction of nutrient
enrichment with physical habitat...
Water temperature is an essential property of a stream. Temperature regulates
physical and biochemical processes in aquatic habitats. Various factors related to
climatic conditions, landscape characteristics, and channel structure directly influence
stream temperature. Numerous studies indicate that increased average air temperature
during the past century has led to stream warming...
In this study, we used a combination of conventional statistical analyses and mechanistic bioenergetics models to understand the potential effects of environmental variability on growth of stream-living fishes in four headwater streams subject to upstream forest harvest. We focused on two common fish consumers in headwater streams in the Pacific...
Intensive cultivation of native grassland for dryland agriculture continuously depleted soil organic carbon (SOC) and nutrients. In 2010, we evaluated the influence of 80 yr of crop residue and nutrient management practices on SOC and N in 0- to 60-cm soil depth profiles in conventionally tilled winter wheat (Triticum aestivum...
Full Text:
on Soil Profile Carbon and 1
Nitrogen in Wheat – Fallow Systems 2
Rajan Ghimire*, Stephen
The bioavailability of chemical compounds in the marine environment fundamentally influences the growth and physiology of microorganisms. Organic and inorganic chemicals that are produced by some marine plankton can be consumed by other plankton for energy production, growth, or to initiate essential physiological processes. Cultures of the diatom Thalassiosira pseudonana,...
The advent of deep learning models leads to a substantial improvement in a wide range of NLP tasks, achieving state-of-art performances without any hand-crafted features. However, training deep models requires a massive amount of labeled data. Labeling new data as a new task or domain emerges consumes time and efforts...
Climate change presents multiple stressors that are impacting marine life. As carbon dioxide emissions continue to increase in the atmosphere, atmospheric and sea water temperatures increase. In addition, more carbon dioxide is absorbed into the oceans, reducing pH and aragonite saturation state, resulting in ocean acidification (OA). Tightly coupled with...
Understanding seasonal changes in growth, survival, and movement rates is
crucial to salmonid management. These life history characteristics provide a context for
evaluation of management actions. We evaluated the life history of individually
marked Oncorhynchus mykiss gairdneri in the South Fork John Day River basin in
Northeastern Oregon. This thesis...
The combined activities of diverse heterotrophic marine microorganisms significantly shape global biogeochemical cycles, but models of these activities are currently limited to aggregate microbial community processes, and it remains unclear how community structure and the functional roles of specific microbial taxa should be integrated into these models. Therefore, understanding the...
Metal-oxo clusters can be described as soluble pieces of metal-oxide frameworks. Currently, metal-oxo clusters are being considered as solution-based precursors for extreme ultraviolet (EUV, 13.5 nm) photoresist materials, which are a crucial component in the fabrication of microelectronic devices. Two different photoresist precursor systems have been investigated – alkyltin clusters...
A statistical description of the deep ocean internal wave field is presented using measurements from the Midocean Acoustic Transmission Experiment, conducted near Cobb Seamount in the NE Pacific (46°46'N, 30°47'W) during June–July 1977. The unique feature of this experiment is the variety of data obtained simultaneously from the same location:...
A mesoscale atmospheric model is used to address the characteristics of stratified flow bounded by a side
wall along a varying coastline. Initial Froude number values are varied through alteration of marine inversion
strength, permitting examination of supercritical, subcritical, and transcritical flow regimes encountering several
coastal configurations. Consistent with shallow...
After hatchery-reared salmonids are released into the wild, their survival and performance are
frequently lower than those of wild conspecifics. Additionally, negative effects of hatchery fish on wild fish are cited as factors affecting the recovery of salmonid populations. Alternative hatchery rearing environments and release practices have been proposed to...
Bumble bees provide vital pollination services in both native and agricultural landscapes. However, in recent years, bumble bee populations have experienced global population declines. The primary causes of these declines have been attributed to the environmental impacts of pathogens, pesticide use and habitat fragmentation. While research has examined the impacts...
A program of research has been established at Oregon State
University to study wood residue combustion using an experimental
spreader-stoker combustor. This research was conducted to increase
the understanding of combustion occurring in wood fired boilers.
Using Douglas Fir screened to 3/8-3/4 inches, two 4x4 factorial
experiments were conducted varying...
Melanocytes are dendritic, pigment-producing cells located in the skin and are responsible for its protection against the deleterious effects of solar ultraviolet radiation (UVR), which include DNA damage and elevated reactive oxygen species (ROS). They do so by synthesizing photoprotective melanin pigments and distributing them to adjacent skin cells (e.g.,...
Wet meadow ecosystems are a useful natural laboratory in which to explore feedbacks between biogenic and geologic controls on valley bottom landforms. Characterized by flat valley floors flanked by higher-gradient hillslopes, these meadows are singular both in that they represent depositional features in what is primarily an erosional environment, and...