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Population genetic structure of Jeffrey pine

Creator:: Furnier, Glenn Richard
Abstract:: Jeffrey pine occurs in the mountains of California and adjacent states. In the Klamath Mountains, the northern margin of the range, it is restricted to infertile ultramafic soils, forming very open stands of low density. It occurs predominantly on more fertile soils in the Sierra Nevada and southern portions of...
Resource Type:: Dissertation

Nuclear and mitochondrial DNA polymorphism and phylogeny in the California closed-cone pines

Creator:: Wu, Junyuan
Abstract:: We studied genetic polymorphism and phylogeny using nuclear random amplified polymorphic DNA markers (RAPDs) and mitochondrial DNA (mtDNA) restriction fragment length polymorphisms (RFLPs) in the three California Closed-Cone Pines: Pinus attenuata Lemm., P. muricata D. Don, and P. radiata D. Don. A total of 343 to 384 trees derived from...
Resource Type:: Masters Thesis
Full Text:: pine shows the largest genetic divergence among populations of the three CCCP species (GST = 0.22

New perspectives on evolutionary relationships within Pinus (Pinaceae) and within subsection Ponderosae (subgenus Pinus)

Creator:: Willyard, Ann Nachreiner
Abstract:: A fossil-calibrated phylogenetic framework based on exemplars from each of the four taxonomic sections within Pinus was created using multiple nuclear and chloroplast loci. Calibration at the well-defined subgeneric split within Pinus with either fossil leaves and cones (ca. 45 million years ago) or fossil wood (ca. 85 million years...
Resource Type:: Dissertation
Full Text:: and characterization of RAPD markers inferring genetic relationships among pine species. Genome 45

Chloroplast DNA variability and phylogeny in the California closed cone pines

Creator:: Hong, Yong-pyo, 1958-
Abstract:: Chloroplast DNA (cpDNA) variability and phylogeny were studied via analysis of restriction site mutations and DNA sequencing in a complex of three closely related species of pines: Pinus radiata D. Don, P. attenuata Lemm., and muricata D. Don. Genomic DNA from 384 trees representing 20 populations in the complex were...
Resource Type:: Dissertation

Geographic variation in central Oregon ponderosa pine (Pinus ponderosa Laws.) : seed germination; seed, wing, and cone morphology; seed color

Creator:: Weber, John C., 1948-
Abstract:: Geographic variation was investigated among 225 locations from five geographically disjunct regions in central Oregon. Characters included: germination speed and uniformity in two test environments differing in stratification period and incubation temperature; weight, three dimensions and three 'angles' of seeds; weight and three dimensions of wings; cone length and scale...
Resource Type:: Dissertation
Full Text:: in Central Oregon Ponderosa Pine (Pinus Ponderosa Laws.): Seed Germination; Seed, Wing and Cone

Plastome phylogenomics in the genus Pinus using massively parallel sequencing technology

Creator:: Parks, Matthew Benjamin
Abstract:: This thesis summarizes work completed over the previous four years primarily focusing on chloroplast phylogenomic inquiry into the genus Pinus and related Pinaceae outgroups using next-generation sequencing on Illumina platforms. During the time of our work, Illumina sequence read lengths have essentially been limited to 25 to 100 base pairs,...
Resource Type:: Dissertation
Full Text:: , Callahan J, Liston A, Deeds JR. 2011. Genetic identification of pine nuts obtained from consumers

Chloroplast DNA phylogeny of hard pines (subgenus Pinus) : inference from site mutations and multiple small (1-10 Kb) inversions

Creator:: Krupkin, Alexander Bennett
Abstract:: Plastid DNA restriction site and rearrangement mutations were used to study phylogenetic relationships among hard pines (subgenus Pinus). Total genomic DNA was cut with 19 restriction enzymes, blotted, and then probed mostly with 80% of the Douglas-Fir (Pseudotsuga menziesii) chioroplast genome (cpDNA) {initial study, using only 6bp recognition enzymes}; or,...
Resource Type:: Masters Thesis

Effects of environment and genetics on western pine shoot borer, Eucosma sonomana, infestation levels in ponderosa pine plantations of central Oregon

Creator:: Prueitt, Sara C.
Abstract:: Infestations of the western pine shoot borer (Eucosma sonomana Kearfott) in young stands of ponderosa pine (Pinusponderosa Lawson), were surveyed on the Deschutes National Forest. Elevation, slope, aspect, tree height, tree diameter, number of shoots in the terminal whorl, stand density, stand age and plant association for each stand were...
Resource Type:: Masters Thesis

Candidate Genes Associated with Blister Rust Resistance in Whitebark Pine (Pinus albicaulis) Revealed through de novo Transcriptome Assembly and Differential Gene Expression Analysis

Creator:: Bair, Zolton J.
Abstract:: Whitebark pine (Pinus albicaulis) is an iconic North American high-elevation tree species currently threatened by climate change, mountain pine beetle, and white pine blister rust (WPBR), a lethal disease caused by the non-native fungal pathogen Cronartium ribicola. In collaboration with the USDA Forest Service Dorena Genetic Resource Center, germplasm was...
Resource Type:: Dissertation
Full Text:: : ____________________________________________________ Jeffrey K. Stone Whitebark pine (Pinus albicaulis) is an iconic North American high

ScholarsArchive@OSU

Population genetic structure of Jeffrey pine

Nuclear and mitochondrial DNA polymorphism and phylogeny in the California closed-cone pines

New perspectives on evolutionary relationships within Pinus (Pinaceae) and within subsection Ponderosae (subgenus Pinus)

Chloroplast DNA variability and phylogeny in the California closed cone pines

Geographic variation in central Oregon ponderosa pine (Pinus ponderosa Laws.) : seed germination; seed, wing, and cone morphology; seed color

Plastome phylogenomics in the genus Pinus using massively parallel sequencing technology

Chloroplast DNA phylogeny of hard pines (subgenus Pinus) : inference from site mutations and multiple small (1-10 Kb) inversions

Effects of environment and genetics on western pine shoot borer, Eucosma sonomana, infestation levels in ponderosa pine plantations of central Oregon

Candidate Genes Associated with Blister Rust Resistance in Whitebark Pine (Pinus albicaulis) Revealed through de novo Transcriptome Assembly and Differential Gene Expression Analysis

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