This thesis covers the use of a quarter car model to select damping rates for aFormula Student (FS) car, focusing on minimizing vertical tire force variation to improvegrip. A 2 degree of freedom (DOF) quarter car model is cycled over the road frequenciesof interest and the results compared with the...
The purpose of this study was to evaluate the impact sediment has on the survival of
bacteria in a typical rangeland stream. This information is an important component in
determining a time integrated prediction of bacterial numbers in the stream sediment and
overlying water. Bacterial survival in stream is a...
Low-frequency vibrations are foundational for material properties including thermal conductivity and chemical reactivity. To resolve the intrinsic molecular conformational dynamics in condensed phase, we implement time-resolved third-harmonic generation (TRTHG) spectroscopy to unravel collective skeletal motions in calcite, water, and aqueous salt solution in situ. The lifetime of three Raman-active modes...
Fluorescent proteins (FPs) are luminescent biomolecules that emit characteristic hues upon irradiation. A group of calmodulin (CaM)-green FP (GFP) chimeras have been previously engineered to enable the optical detection of calcium ions (Ca²⁺). We investigate one of these genetically encoded Ca²⁺ biosensors for optical imaging (GECOs), GEM-GECO1, which fluoresces green...
In this dissertation, my research work on excited state dynamics of small organic molecules in solutions is presented. Using femtosecond stimulated Raman spectroscopy (FSRS) as the main experimental tool, the excited state hydrogen-bonding dynamics (ESHBD) of Coumarin 102, a common laser dye molecule, in ethanol solution is examined with <150...
This biological assessment (BA) documents the potential effects of existing Forest Service (FS) Land and Resource Management Plans (LRMPs), or 'Forest Plans' and Bureau of Land Management (BLM) Land Use Plans (LUPs) on the Canada Lynx (Lynx canadensis), hereafter referred to as the lynx. LRMPs and LUPs are collectively referred...
A new class of nearshore waves based on the shear instability of a steady longshore current is discussed. The dynamics depend on the conservation of potential vorticity but with the background vorticity field, traditionally the role of Coriolis in larger scale flows, supplied by the shear structure of the longshore...
The WWC family consists of three proteins‐ KIBRA/WWC1, WWC2, and WWC3. The three proteins share a similar primary structure and interact with a common set of proteins. Each paralog contains two WW domains which recognize proline‐rich sequences of the type PPxY (P is proline, Y is tyrosine, x is any...
Ultrafast spectroscopy has recently gained momentum as a powerful, noninvasive characterization toolset capable of studying a diverse array of samples with applications in chemistry, physics, biology, engineering, and more. Two popular ultrafast spectroscopic techniques include femtosecond transient absorption (fs-TA) and femtosecond stimulated Raman spectroscopy (FSRS). The latter of these techniques...
In the past decades, femtosecond stimulated Raman spectroscopy (FSRS) has been gaining tremendous popularity in fundamental sciences stemming from chemistry to biology. It is capable of capturing both equilibrium and non-equilibrium structural information across a broad range of timescales with simultaneously high temporal and spectral resolutions. Femtosecond transient absorption spectroscopy...
Industrial reprocessing of irradiated nuclear fuel (INF) is one of the most complex procedures performed on a large scale; the process is intricate due to the mix of radionuclides present in INF. As a global trend for nuclear power and reprocessing continues, research is geared toward optimizing the extraction of...
The transfer of air travelers with disabilities between a mobility aid and an aircraft seat is a major source of injury for both the travelers and the airline personnel assisting in the transfer. The risk to both parties might be reduced through the biomechanical study of the transfer task. Such...
Mapping out multidimensional potential energy surfaces has been a goal of
physical chemistry for decades in the quest to both predict and control chemical
reactivity. Recently a new spectroscopic approach called Femtosecond Stimulated Raman
Spectroscopy or FSRS was introduced that can structurally interrogate multiple
dimensions of a reactive potential energy...
This publication reports the results of a preliminary survey listing 527 forest-tree plantations in the western United States and Canada. Of these, 250 involve families of known parentage, 131 provenance-test
material, 87 clonal material, and 59 interspecific hybrids. The report is intended (1) to serve forest researchers in locating genetic...
Ultrafast spectroscopy can exploit the structure-function relationship of chemical- and biological-based systems. More specifically, femtosecond stimulated Raman spectroscopy (FSRS) provides ground- and excited-state vibrational information with simultaneously high spectral (spatial) and temporal resolutions. The electronic counterpart, femtosecond transient absorption (fs-TA), complements FSRS data analysis as part of a comprehensive approach...
Background: Mangroves are ecologically important and highly threatened forest communities. Observational and genetic evidence has confirmed the long distance dispersal capacity of water-dispersed mangrove seeds, but less is known about the relative importance of pollen vs. seed gene flow in connecting populations. We analyzed 980 Avicennia germinans for 11 microsatellite...
Renewable energy sources are becoming increasingly important due to their low environmental impact and limitless nature. This thesis explores the design of a 250 mW permanent magnet linear generator wave energy converter to power ocean sensors. While many wave energy converters exist, this is a unique application because the wave...
The energy budget of a pumice desert surface was analyzed under clear skies during early, mid-and late summer periods. The pumice site is in the semi-arid plateau region of Central Oregon at an elevation of about 1500 meters. The flat pumice surface is approximately 250 hectares in extent, and is...
Photoactivated biomedical tools like fluorescent biosensors and optogenetic proteins have increased in popularity due to the precision targeting and activation used for in vivo applications. In nature, the initially discovered parent proteins exhibit properties such as fluorescence quantum yield (FQY), fluorescence color, and photoswitching dynamics that are unfavorable in mammalian...
The purpose of this exploratory study was to develop an instrument to measure perceived food autonomy (PFA) among cognitively alert residents in state licensed Assisted Living (AL) facilities, and to investigate the influence of PFA on food satisfaction, while controlling for functional (physical, social, and psychological) status, general health, and...
The heat-transfer phenomena studied in this work were
associated with pool boiling from a flat horizontal surface facing
upward with the bulk liquid at its saturation temperature. The
analysis of boiling sound and the investigation of the transition boiling
mechanism constituted the essence of the present study.
The distinctively large...
Holocene bulk sediment and component accumulation rates were
measured in twenty-eight piston and gravity cores taken from the
floor of the western Panama Basin and on the surrounding ridges.
Radiocarbon ages and oxygen isotope curves provided Holocene age
control in nine cores. Time datums in nineteen other cores were
inferred...
The goal of this study was to develop an understanding of the nature of surge wave loading on
wood framed residential structures for a variety of building configurations and test conditions.
The objectives of the study were: (1) to measure forces on a 1/6th scale wood framed
residential structure, (2)...
Coastal wetlands are characterized by high biodiversity, which is one of the main criteria considered when establishing protection policies or when proposing adequate management actions. In this study, the crustacean and aquatic insect composition of the Emporda wetlands is described. These two faunal groups contribute highly to the total biodiversity...
Femtosecond stimulated Raman spectroscopy (FSRS) is a powerful ultrafast technique which can track photoinduced excited state structural events on femtosecond (fs) to picosecond (ps) timescales. In addition to high temporal and spectral resolutions, FSRS provides a broad spectral window from ca. 100—2000 cm-1 for detection, enabling the direct mapping of...
During the Canterbury Earthquake Sequence (CES) in Christchurch, NZ, an estimated $15B in damages occurred due to liquefaction-induced phenomena, illustrating the importance of understanding site-specific responses to seismic ground motions, as well the importance of accurately predicting liquefaction severity. One potential method for improving the understanding of how a site...
Sotalol is a class III anti-arrhythmic drug with class II properties that is commonly used in the treatment of ventricular tachyarrhythmias in dogs. The anti-arrhythmic effects of sotalol are mediated by an increase in action potential duration and prolongation of atrial and ventricular repolarization via antagonism of the delayed rectifier...
In this dissertation, excited state proton transfer (ESPT) and its inhibition in solution and protein environments are revealed using both femtosecond transient absorption (fs-TA) spectroscopy and femtosecond stimulated Raman spectroscopy (FSRS). Using a tunable Raman pump to enhance transient vibrational features of the photoacidic chromophore HPTS in methanol and methanol...
Portable, high power efficiency communication devices is a growing market in the semiconductor industry. Analog-to-digital converters (ADC) are key interface that are used to digitize the sensed information. Recently, digital techniques have been proposed to improve analog building block power efficiency in sub-micron technologies. This research focuses on mixed signal...
Kinematic tectonic models constrained by Airy isostatic equilibrium demonstrate the crustal-scale evolution of the Brooks Range during ocean basin closure, arc-continent collision, and exhumation of the orogen. The Bouguer gravity anomaly low that develops across the orogen is related by wavelength to the amount of shortening during collision, and by...
Current cadmium telluride and copper indium gallium diselenide thin-film solar cells
(TFSCs) utilize thick absorbers (2 - 4 μm). For efficient carrier extraction in these TFSCs,
the absorber layer requires high carrier mobilities and a long minority carrier lifetime, which
necessitates the use of a high purity, defect-free thin film....
Incremental ADCs (IADCs) have many advantages for low-frequency high-accuracy data conversion—they are easy to multiplex between channels, need simpler digital decimation filter, and allow extended counting with a Nyquist-rate ADC. A single-loop incremental ADC was designed and fabricated in 90 nm for a biosensor interface circuit. It incorporates one integrator,...
Recent developments in the field of clinical echocardiography allow the ultrasonographer to objectively quantify both regional and global myocardial function. Regional deformation (Strain) and deformation rate (Strain Rate) are novel indices of ventricular function that can be estimated non-invasively by ultrasonographic interrogation of the heart. Deformation Imaging (DI)represents a family...
Analog-to-digital converters are essential components to the portable devices that we are using today. Wireless sensors, body implanted devices, communication devices and so forth require low power ADCs. Therefore achieving higher resolution and bandwidth with lower power consumption is targeted in ADCs design. In this work power efficient ADCs for...
This thesis is concerned with simulating two forms of energy retrieval.
Standard computer programs are routinely used to simulate
such energy systems. However, the accuracy of these simulations is
not well documented. The main objective of the work presented here is
to evaluate the validity of this type of simulation...
Fungi are a large group of eukaryotes found in nearly all ecosystems. More than 250 fungal genomes have already been sequenced, greatly improving our understanding of fungal evolution, physiology, and development. However, for the Pezizomycetes, an early-diverging lineage of filamentous ascomycetes, there is so far only one genome available, namely...
The purpose of this study was to develope a plant community classification
within the Siskiyou mountains, a small range within the Klamath
geological province well known for its geologic and floristic diversity.
Forest land managers have expressed the need for identification of
basic Land classes that will aid in the...
Siletzia is a basaltic Paleocene and Eocene
large igneous province in coastal Oregon,
Washington, and southern Vancouver Island
that was accreted to North America in the
early Eocene. New U-Pb magmatic, detrital
zircon, and ⁴⁰Ar/³⁹Ar ages constrained by
detailed field mapping, global nannoplankton
zones, and magnetic polarities allow correlation
of...
Full Text:
underlying Silet-
zia northward ~250 km from the probable
hotspot track on North America. In the ref-
erence
There is a perceived trade-off between fire risk reduction and northern spotted owl habitat protection in dry-conifer forests in southwestern Oregon. Management options for balancing this trade-off need to be sought at the landscape level. Applied landscape ecology suggests three important features to consider are (1) patch size and configuration...
Research was carried out to determine the influence of increasing
the percentage base saturation of the soil on the yield of
the commercial strawberry. It was found that the effect of increasing
the bases in the soils was directly related to the original
percentage base saturation. When this original value...
Two-phase gas-liquid flows in microscale fractal-like branching channel flow networks were experimentally studied to assess the validity of existing void fraction correlations and flow regimes based on superficial gas and liquid velocities. Void fractions were assessed using two different methods. First, void fraction data were acquired using a High-Speed-High-Resolution (HSHR)...
Carbon and energy fluxes were measured with the eddy covariance technique
above two semi-arid ecosystems, ponderosa pine and juniper/sagebrush, located in
central Oregon. The two ecosystems have low LAI and a very open canopy structure.
The energy closure was ~70-80% at both ecosystems, equivalent to an imbalance of
150-250 W...
Monoclonal antibodies were developed against serotype 3, P-1059 strain of Pasteurella multocida. Enzyme-linked immunosorbent assays (ELISA) were used to detect antibodies in supernatants of hybridoma cells to either a surface protective (2.5 S) antigen prepared from a 2.5% saline extract or lipopolysaccharide (LPS) prepared by the phenol-water method. Forty two...
A scalable synthesis of the "flat" tridecameric inorganic cluster [Al₁₃(μ₃-OH)₆(μ-OH)₁₈(H₂O)₂₄]¹⁵⁺ has been realized by treating an aqueous aluminum nitrate solution with zinc-metal powder at room temperature. Single crystals and polycrystalline samples are readily obtained in yields exceeding 55% relative to the starting reagent Al(NO₃)₃. Products have been characterized by X-ray...
Five winter wheat cultivars and their diallel crosses were evaluated for plant height, harvest index, deading-maturity duration, the components of yield, (spikes per plant, spikelets per spike, kernel weight and kernels per spikelet)and total plant yield. Two diverse locations, Moro, a dryland site (250 mm annually) located in central Oregon...
Proper nitrogen (N) management and variety selection are important for profitable hard red winter (HRW) wheat production in the dryland growing regions of northeastern Oregon. In these dryland systems, N management for grain yield and grain protein concentration (GPC) is challenging due to climatic and year-to-year variation in production environments....
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