Published June 1983. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the Sea Grant Catalog: http://seagrant.oregonstate.edu/publications
This report, Crisis in Oregon Estuaries, is published by the Oregon State University Extension Marine Advisory program in connection with the National Science Foundation's Sea Grant program. Information in the report was provided by the Estuary Conservation and Development Committee of the Oregon chapter of the American Fisheries Society, an...
The purpose of this study was to determine the relationship between the overall
changes in concentration of plasma pyridoxal 5'-phosphate (PLP), red blood cell PLP (rbc
PLP) and plasma glucose during an oral glucose tolerance test (OGTT) in persons with
diabetes mellitus (DM), and to test the hypothesis that the...
Counter Current Flow Limitation (CCFL) was observed in the pressurizer surge line of the Oregon State University APEX facility during test NRC-10. This test simulated a one-inch diameter cold leg break with a failure of three of four of the fourth-stage Automatic Depressurization System (ADS) valves. The result was a...
A study was conducted to identify geographical variation in loblolly pine bark and wood properties at the whole-tree level and to quantify the responses in whole-tree
bark and wood properties following contrasting silvicultural practices that included planting density, weed control, and fertilization. Trees were destructively sampled from
both conventionally managed...
Tannins are a diverse group of plant-produced, polyphenolic compounds with metal-chelating and antimicrobial properties that are prevalent in many soils. Using transcriptomics, we determined that tannic acid, a form of hydrolysable tannin, broadly affects the expression of genes involved in iron and zinc homeostases, sulfur metabolism, biofilm formation, motility, and...
The soil bacterium Pseudomonas protegens Pf-5 (previously called P. fluorescens Pf-5) produces two siderophores, enantio-pyochelin and a compound in the large and diverse pyoverdine family. Using high-resolution mass spectroscopy, we determined the structure of the pyoverdine produced by Pf-5. In addition to producing its own siderophores, Pf-5 also utilizes ferric...
One of the most important micronutrients for bacterial growth is iron, whose bioavailability in soil is limited. Consequently, rhizospheric bacteria such as Pseudomonas fluorescens employ a range of mechanisms to acquire or compete for iron. We investigated the transcriptomic and proteomic effects of iron limitation on P. fluorescens Pf-5 by...
This study was to investigate effects of growth rate
and cambial age on properties of wood from two increasingly
used hardwood species, red alder (Alnus rubra Bong.) and
Oregon white oak (Quercus garryana Dougl.), for better
understanding factors affecting wood quality in hardwoods.
Thirty 7-year-old trees grown at widely varying...
Many people enjoy going to the beach, but few know how the tides work. People who earn their living on the sea have a special need to understand the tides; the rest of us need to understand the tides for different reasons. Knowing how tides work can help us avoid...
Reforesting harvested lands in southwestern Oregon has been
difficult because of low rainfall, high evaporative demand, and
competitive understory vegetation. Herbicides have been a preferred
method to control competing vegetation but herbicide use on federal
lands was curtailed in 1984. As a result, interest in livestock
grazing as a vegetation...
A method for isolating the salt gland (SG) from the larval brine
shrimp has been developed. This extra-renal organ is removed from 5-10%
of Stage Inauplii by vortexing after incubating the animals at 37°C for
8 hours in a saline solution buffered with 100 mM sodium phosphate at pH
7.6....
Novel mucosal vaccines (LL-M2e, LL-HAe, SG-HAe) were constructed from live, non-pathogenic Lactococcus lactis or Streptococcus gordonii that express conserved regions of HA or M2 antigens from avian influenza virus (AIV) A. All three vaccines evoked antigen-specific serum immunoglobulin G (IgG) responses in vaccinated chickens. The addition of the adjuvant cholera...
Arachidonic acid (ARA) and docosahexaenoic acid (DHA) are polyunsaturated fatty acids required for proper embryonic development, specifically neurodevelopment. However, little is known regarding their conversion to other metabolites during embryogenesis. The oxidation of ARA gives rise to the biologically active eicosanoids and the oxidation of DHA gives rise to the...
Substations are a crucial element at the transmission and distribution level of electric power systems. The primary substation equipment (power transformers and high voltage switching equipment) is used to transfer and transform electric energy by stepping up or down the voltage in transmission substations. Secondary equipment (such as IEDs, Intelligent...
In rodent models as well as in fish models there are significant
species differences in the susceptibility toward aflatoxin B₁ (AFB₁)
carcinogenesis. Mouse is less susceptible toward AFB₁ carcinogenesis
than rat. Researchers have come to the conclusion that the lower
susceptibility of mice is not a result of less effective...
Reflux condensation tests examining steam condensation in a PWR steam
generator (SG) were conducted at the Oregon State University (OSU) Advanced
Plant Experiment (APEX) Test Facility from 2005 through 2007. The
experimental data collected will provide a basis to assess TRACE steam generator
modeling techniques and assist in development of...
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examining steam condensation in a PWR steam
generator (SG) were conducted at the Oregon State University
Birth and pupping season records of Pacific harbor seals
(Phoca vitulina richardsi) were used in an analysis of
photoperiod effect on the timing of birth in this species. Dates
and latitudes of births were converted into photoperiods using a
photoperiod equation. Sequential dates from parturition were
converted into photoperiods and...
The Advanced Test Reactor (ATR) is conducting
scoping studies for the conversion of its fuel from a
highly enriched uranium (HEU) composition to a low-enriched
uranium (LEU) composition, through the
Reduced Enrichment for Research and Test Reactors
Program, within the Global Threat Reduction Initiative.
These studies have considered a wide...
The metabolism of pyrrolizidine alkaloids and other
drugs was studied with regard to nutritional status and
species differences. Pyrrolizidine alkaloids which are biotransformed
to severely toxic metabolites were isolated
from tansy ragwort (Senecio jacobaea). Semi-purified alkaloid
crystals containing five alkaloids (senecionine, seneciophylline,
jacobine, jacoline, and jacozine) were prepared
and found...
This study represents an internship, as a requirement of the Professional Science Masters program at Oregon State University, performed with Western Ag Innovations Inc. The study consisted of two aspects -- one business and one science oriented. The two objectives of this internship were to: 1) qualitatively evaluate how two...
California brome and blue wildrye are important native grass species in the Pacific Northwest. However, both species have been reported to have low emergence under less than favorable field conditions. Seed coating is used to improve emergence and stand establishment of various crops. Three studies were carried out to determine...
Myxobacteria represent an interesting class of Gram-negative soil bacteria. These bacteria utilize organic materials from the environment as a food source by the action of their extracellular hydrolytic enzymes. They grow vegetatively in the presence of adequate nutrients. During starvation conditions, however, they aggregate and form multicellular structures called fruiting...
The fermentation of honey-based musts has been a feature of civilization for millennia. Typically comprised of 75-90% (w/w) simple (i.e. fermentable) sugars, the glucose and fructose present are readily fermented by either pitched or adventitious micro-organisms. Nevertheless, despite its venerable heritage, honey-based fermentations are prone to inconsistency, and it is...
Seismic refraction data collected in 1985 by the USGS were used in
this study to derive the P and S velocity structure of the crust beneath the
Gulf of Maine. The data quality differs among instruments and is affected
by surficial lateral heterogeneities, a ringy source signature and
reverberations. Velocity...
Douglas-fir (Pseudotsuga menziesii var. menziesii (Mirb.) Franco) growth in the Pacific Northwest is affected by climatic, edaphic factors and Swiss needle cast (SNC) disease. We examine Douglas-fir growth responses to temperature, dew point deficit (DPD), soil moisture, and SNC using time series intervention analysis of intra-annual tree-ring width data collected...
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0.59 0.74 0.74 0.60
1 Divisonal Palmer Drought Severity Index (PDSI) from USDA.
2 PRISM.
5
Na-ion batteries are emerging as one of the most promising energy storage technologies, particularly for grid-level applications. Among anode candidate materials, hard carbon is very attractive due to its high capacity and low cost. However, hard carbon anodes often suffer a low first-cycle Coulombic efficiency and fast capacity fading. In...
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batteries (NIBs)5−7 that
exhibit slightly inferior performance metrics compared to LIBs due to the lower
Wide-angle and vertical incidence seismic data from Seismic Hazards Investigations in Puget Sound (SHIPS), gravity modeling, and seismicity are used to derive two-dimensional crustal models beneath the Strait of Juan de Fuca. The Eocene volcanic Crescent-Siletz terrane is significantly thicker than previously recognized and extends from near the surface to...
We report the construction of a three-dimensional template bank for the search for gravitational waves
from inspiralling binaries consisting of spinning compact objects. The parameter space consists of two
dimensions describing the mass parameters and one “reduced-spin” parameter, which describes the secular
(nonprecessing) spin effects in the waveform. The template...
Log and core data document gas saturations as high as
90% in a coarse-grained turbidite sequence beneath the gas
hydrate stability zone (GHSZ) at south Hydrate Ridge, in the
Cascadia accretionary complex. The geometry of this gas-saturated
bed is defined by a strong, negative-polarity
reflection in 3D seismic data. Because...
The effect of three different weed management strategies, non-weeding, hand weeding, and weed mat, were examined on physicochemical, sugar profile, and antioxidant properties of two cultivars of blackberry (Rubus spp), ’Marion’ and ’Black Diamond’ harvested at three time intervals during the 2012 season. Sensory analysis on flavor intensity of six...
The design and construction of two new sample injection systems or nozzles, for use with the Oregon State electron diffraction apparatus are discussed. One of these nozzles was intended for use with volatile samples the vapors of which were to be heated or cooled over the range -196 to 540°C;...
Tropical peatlands cover an estimated 440,000 km² (~10% of global peatland area) and are significant in the global
carbon cycle by storing about 40–90 Gt C in peat. Over the past several decades, tropical peatlands have experienced
high rates of deforestation and conversion, which is often associated with lowering the...
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carbon accumulation rates for 11 000-year-old inland, and 5 000-year-old coastal peatlands
were about
This project has provided the ODFW Marine Habitat Project with a unique
opportunity to make a comparative examination of the habitats and fish communities of a
heavily fished reef off of Siletz Bay, and a nearly unfished reef off Cape Perpetua. There
are over 17,000 angler trips for groundfish out...
This report contains a series of individual reports within it. The main report continues growth and aging studies on fat gaper clams in Yaquina Bay. This document also includes a report on other Fish Commission activities on the Coast, a summary of razor clam research, the beginning of a survey...
Douglas-fir (Pseudotsuga menziesii var. menziesii (Mirb.) Franco) growth in the Pacific Northwest is affected by climatic, edaphic factors and Swiss needle cast (SNC) disease. We examine Douglas-fir growth responses to temperature, dew point deficit (DPD), soil moisture, and SNC using time series intervention analysis of intra-annual tree-ring width data collected...
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Background: Improved maps of species distributions are important for effective management of wildlife under increasing anthropogenic pressures. Recent advances in lidar and radar remote sensing have shown considerable potential for mapping forest structure and habitat characteristics across landscapes. However, their relative efficacies and integrated use in habitat mapping remain largely...
Background—The effect of intensive blood pressure (BP) lowering on kidney function among individuals with established cerebrovascular disease and preserved estimated glomerular filtration rate (eGFR) is not established.
Methods and Results—Among 2610 participants randomized to a lower (<130 mm Hg) versus higher (130–149 mm Hg) systolic BP target with repeated measures...
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/90 mm Hg, particularly among those without
proteinuria.5–9
Editorial see p 552
Clinical
The pseudo-glycosyltransferase VldE catalyzes non-glycosidic C-N coupling between an unsaturated cyclitol and a saturated aminocyclitol with the conservation of the stereochemical configuration of the substrates to form validoxylamine A 7'-phosphate, the biosynthetic precursor of the antibiotic validamycin A. To study the molecular basis of its mechanism, the three-dimensional structures of...
Fluorescent proteins (FPs) have played a pivotal role in bioimaging and advancing biomedicine. The versatile fluorescence from engineered, genetically encodable FP variants greatly enhances cellular imaging capabilities, which are dictated by excited state structural dynamics of the embedded chromophore inside the protein pocket. Visualization of the molecular choreography of the...
Intraexciton transitions in semiconductor quantum wells are modulated by strong and tunable few-cycle terahertz pulses. Time-resolved terahertz-pump and optical-probe measurements demonstrate that the 1s heavy-hole and light-hole exciton resonances undergo large-amplitude spectral modulations when the terahertz radiation is tuned near the 1s–2p intraexciton transition. The strong nonlinear optical transients exhibit...