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Characteristics of the population of Rhizobium trifolii in an old subterranean clover-grass pasture and its relationship to forage yield and quality

Creator:: Demezas, David H. and Bottomley, Peter J.
Abstract:: The International Hill Land Symposium was held at Oregon State University in April 1983.
Resource Type:: Conference Proceeding
Full Text:: H. Demezas and Peter J. Bottomley Departments of Microbiology and Soil Science Oregon State

Gorsevski, Peter MS.pdf

Creator:: Gorsevski, Peter (Pece) V.
Abstract:: This thesis presents the idea for FORIN (Forest Roads Inventory), a computerized forest roads inventory system. FORIN is a tool to more efficiently inventory and manage information of forest roads. FORIN is intended for use by field personnel, who will use pen-based computers to improve productivity, accuracy of inventories, to...
Full Text:: AN ABSTRACT OF TILE THESIS OF Peter (Pece) V. Gorsevski for the

D-Lactate metabolism and the obligate requirement for CO2 during growth on nitrite by the facultative lithoautotroph Nitrobacter hamburgensis

Creator:: Starkenburg, Shawn R., Arp, Daniel J., and Bottomley, Peter J.
Abstract:: Nitrobacter hamburgensis X14 is a facultative lithoautotroph that conserves energy from the oxidation of nitrite (NO 2 ) and fixes carbon dioxide (CO2) as its sole source of carbon. The availability of the N. hamburgensis X14 genome sequence initiated a re-examination of its mixotrophic and organotrophic potential, as genes encoding...
Resource Type:: Article
Full Text:: . Starkenburg,1 Daniel J. Arp2 and Peter J. Bottomley1,3 Correspondence Shawn R. Starkenburg starkens

Nitrification Responses of Soil Ammonia-Oxidizing Archaea and Bacteria to Ammonium Concentrations

Creator:: Giguere, Andrew T., Taylor, Anne E., Myrold, David D., and Bottomley, Peter J.
Abstract:: Although ammonia-oxidizing archaea (AOA) and bacteria (AOB) coexist in most non-acidic agricultural soils, the factors that influence their relative contributions to soil nitrification activity remain unclear. A 2- to 4-d whole soil microcosm assay was developed, utilizing the aliphatic C₈ alkyne 1-octyne to inactivate AOB-driven nitrification activity without impacting AOA...
Resource Type:: Article
Full Text:: , Peter Bottomley a, b 4 5 a Oregon State University, Department of Crop and Soil Science, Corvallis

Thauera butanivorans sp. nov., a C₂–C₉ alkane-oxidizing bacterium previously referred to as ‘Pseudomonas butanovora’

Creator:: Dubbels, Bradley L., Sayavedra-Soto, Luis A., Bottomley, Peter J., and Arp, Daniel J.
Abstract:: The placement of ‘Pseudomonas butanovora’ in the genus Thauera was proposed previously, based on 16S rRNA gene sequence analysis, upon further studies of taxonomical characteristics. In this study, physiological characteristics and DNA–DNA reassociation data are presented and the transfer of ‘P. butanovora’ to the genus Thauera is proposed. The original...
Resource Type:: Article
Full Text:: Peter J. Bottomley2 and Daniel J. Arp1 Correspondence Daniel J. Arp arpd@science.oregonstate.edu

MellbyeSteadyStateGrowthSupp1.pdf

Creator:: Mellbye, Brett L., Giguere, Andrew, Chaplen, Frank, Bottomley, Peter J., and Sayavedra-Soto, Luis A.
Abstract:: Nitrosomonas europaea is a chemolithoautotrophic bacterium that oxidizes ammonia (NH₃) to obtain energy for growth on carbon dioxide (CO₂) and can also produce nitrous oxide (N₂O), a greenhouse gas. We interrogated the growth, physiological, and transcriptome responses of N. europaea to conditions of replete (>5.2 mM) and limited inorganic carbon...
Full Text:: Giguereb, Frank Chaplenc, Peter J. Bottomleyb,d, Luis A. Sayavedra-Sotoa#. aDepartment of Botany and

Dynamics of ammonia oxidizing archaea and bacteria populations and contributions to soil nitrification potentials

Creator:: Taylor, Anne E., Zeglin, Lydia H., Wanzek, Thomas A., Myrold, David D., and Bottomley, Peter J.
Abstract:: It is well known that the ratio of ammonia oxidizing archaea (AOA) and bacteria (AOB) ranges widely in soils, but no data exist on what might influence this ratio, its dynamism, or how changes in relative abundance influences the potential contributions of AOA and AOB to soil nitrification. By sampling...
Resource Type:: Article
Full Text:: . Taylor1*, Lydia H. Zeglin1, Thomas A. Wanzek1, 3 David D. Myrold1, and Peter J. Bottomley1,2 4

MellbyeSteadyStateGrowth.pdf

Creator:: Mellbye, Brett L., Giguere, Andrew, Chaplen, Frank, Bottomley, Peter J., and Sayavedra-Soto, Luis A.
Abstract:: Nitrosomonas europaea is a chemolithoautotrophic bacterium that oxidizes ammonia (NH₃) to obtain energy for growth on carbon dioxide (CO₂) and can also produce nitrous oxide (N₂O), a greenhouse gas. We interrogated the growth, physiological, and transcriptome responses of N. europaea to conditions of replete (>5.2 mM) and limited inorganic carbon...
Full Text:: Andrew Giguere,b Frank Chaplen,c Peter J. Bottomley,b,d Luis A. Sayavedra-Sotoa Department of Botany and

MellbyeSteadyStateGrowthSupp2.xls

Creator:: Mellbye, Brett L., Giguere, Andrew, Chaplen, Frank, Bottomley, Peter J., and Sayavedra-Soto, Luis A.
Abstract:: Nitrosomonas europaea is a chemolithoautotrophic bacterium that oxidizes ammonia (NH₃) to obtain energy for growth on carbon dioxide (CO₂) and can also produce nitrous oxide (N₂O), a greenhouse gas. We interrogated the growth, physiological, and transcriptome responses of N. europaea to conditions of replete (>5.2 mM) and limited inorganic carbon...

Steady-State Growth under Inorganic Carbon Limitation Conditions Increases Energy Consumption for Maintenance and Enhances Nitrous Oxide Production in Nitrosomonas europaea

Creator:: Mellbye, Brett L., Giguere, Andrew, Chaplen, Frank, Bottomley, Peter J., and Sayavedra-Soto, Luis A.
Abstract:: Nitrosomonas europaea is a chemolithoautotrophic bacterium that oxidizes ammonia (NH₃) to obtain energy for growth on carbon dioxide (CO₂) and can also produce nitrous oxide (N₂O), a greenhouse gas. We interrogated the growth, physiological, and transcriptome responses of N. europaea to conditions of replete (>5.2 mM) and limited inorganic carbon...
Resource Type:: Article

ScholarsArchive@OSU

Characteristics of the population of Rhizobium trifolii in an old subterranean clover-grass pasture and its relationship to forage yield and quality

Gorsevski, Peter MS.pdf

D-Lactate metabolism and the obligate requirement for CO2 during growth on nitrite by the facultative lithoautotroph Nitrobacter hamburgensis

Nitrification Responses of Soil Ammonia-Oxidizing Archaea and Bacteria to Ammonium Concentrations

Thauera butanivorans sp. nov., a C₂–C₉ alkane-oxidizing bacterium previously referred to as ‘Pseudomonas butanovora’

MellbyeSteadyStateGrowthSupp1.pdf

Dynamics of ammonia oxidizing archaea and bacteria populations and contributions to soil nitrification potentials

MellbyeSteadyStateGrowth.pdf

MellbyeSteadyStateGrowthSupp2.xls

Steady-State Growth under Inorganic Carbon Limitation Conditions Increases Energy Consumption for Maintenance and Enhances Nitrous Oxide Production in Nitrosomonas europaea

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