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Filtering by: Creator Bredeweg, Erin L. Remove constraint Creator: Bredeweg, Erin L. Commencement Year Unknown Remove constraint Commencement Year: Unknown

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  • Metadata_FARs.docx

    Creator:
    Bredeweg, Erin L. and Freitag, Michael
    Abstract:
    Transcription factor (TF) genes were modified endogenously to include epitope tags for identification of TF protein binding sites by Chromatin Immunoprecipitation (ChIP), followed by high throughput sequencing. We used RNA-sequencing in carbon sources of sucrose, butyrate, and oleate in far-1, far-2, and a double far-1; far-2 mutant to find transcripts...
    Full Text:
    Dissertation of Erin Bredeweg: “Transcriptional Networks Controlled by the Fatty Acid Regulators, FAR-1 and FAR

  • TableS10_MIPS-FAR2-RNAfiltered.xlsx

    Creator:
    Bredeweg, Erin L. and Freitag, Michael
    Abstract:
    Transcription factor (TF) genes were modified endogenously to include epitope tags for identification of TF protein binding sites by Chromatin Immunoprecipitation (ChIP), followed by high throughput sequencing. We used RNA-sequencing in carbon sources of sucrose, butyrate, and oleate in far-1, far-2, and a double far-1; far-2 mutant to find transcripts...
    Full Text:
    245 2.43 1.411522634 0.0309019702 01.20.19 metabolism of secondary products derived from glycine, L

  • TableS08_FAR2-GO_ChIP.xlsx

    Creator:
    Bredeweg, Erin L. and Freitag, Michael
    Abstract:
    Transcription factor (TF) genes were modified endogenously to include epitope tags for identification of TF protein binding sites by Chromatin Immunoprecipitation (ChIP), followed by high throughput sequencing. We used RNA-sequencing in carbon sources of sucrose, butyrate, and oleate in far-1, far-2, and a double far-1; far-2 mutant to find transcripts...
    Full Text:
    01.20.19 metabolism of secondary products derived from glycine, L-serine and L-alanine 5 0.53 NCU03498

  • TableS03_FAR1O_ChIP.xlsx

    Creator:
    Bredeweg, Erin L. and Freitag, Michael
    Abstract:
    Transcription factor (TF) genes were modified endogenously to include epitope tags for identification of TF protein binding sites by Chromatin Immunoprecipitation (ChIP), followed by high throughput sequencing. We used RNA-sequencing in carbon sources of sucrose, butyrate, and oleate in far-1, far-2, and a double far-1; far-2 mutant to find transcripts...
    Full Text:
    10.84744 4202120 4202845 10.84744 1.65E-07 1.07E-07 -90 sc07 NCU05897 - l-fucose permease 3 - - - - 1 - 2

  • TableS02_FAR1B_ChIP.xlsx

    Creator:
    Bredeweg, Erin L. and Freitag, Michael
    Abstract:
    Transcription factor (TF) genes were modified endogenously to include epitope tags for identification of TF protein binding sites by Chromatin Immunoprecipitation (ChIP), followed by high throughput sequencing. We used RNA-sequencing in carbon sources of sucrose, butyrate, and oleate in far-1, far-2, and a double far-1; far-2 mutant to find transcripts...
    Full Text:
    - - 3 2 2 2 2 315 NCU05624 + L-asparaginase ERROR:#N/A ERROR:#N/A ERROR:#N/A ERROR:#N/A ERROR:#N/A ERROR

  • TableS01_FAR1S_ChIP.xlsx

    Creator:
    Bredeweg, Erin L. and Freitag, Michael
    Abstract:
    Transcription factor (TF) genes were modified endogenously to include epitope tags for identification of TF protein binding sites by Chromatin Immunoprecipitation (ChIP), followed by high throughput sequencing. We used RNA-sequencing in carbon sources of sucrose, butyrate, and oleate in far-1, far-2, and a double far-1; far-2 mutant to find transcripts...
    Full Text:
    ERROR:#N/A ERROR:#N/A ERROR:#N/A ERROR:#N/A 2631 3088 NCU09532 - L-threo-3-deoxy-hexulosonate aldolase 9

  • TableS11_gene_differential-expression.txt

    Creator:
    Bredeweg, Erin L. and Freitag, Michael
    Abstract:
    Transcription factor (TF) genes were modified endogenously to include epitope tags for identification of TF protein binding sites by Chromatin Immunoprecipitation (ChIP), followed by high throughput sequencing. We used RNA-sequencing in carbon sources of sucrose, butyrate, and oleate in far-1, far-2, and a double far-1; far-2 mutant to find transcripts...

  • TableS09_MIPS-FAR1-RNAfiltered.xlsx

    Creator:
    Bredeweg, Erin L. and Freitag, Michael
    Abstract:
    Transcription factor (TF) genes were modified endogenously to include epitope tags for identification of TF protein binding sites by Chromatin Immunoprecipitation (ChIP), followed by high throughput sequencing. We used RNA-sequencing in carbon sources of sucrose, butyrate, and oleate in far-1, far-2, and a double far-1; far-2 mutant to find transcripts...

  • TableS07_FAR1-GO_ChIP.xlsx

    Creator:
    Bredeweg, Erin L. and Freitag, Michael
    Abstract:
    Transcription factor (TF) genes were modified endogenously to include epitope tags for identification of TF protein binding sites by Chromatin Immunoprecipitation (ChIP), followed by high throughput sequencing. We used RNA-sequencing in carbon sources of sucrose, butyrate, and oleate in far-1, far-2, and a double far-1; far-2 mutant to find transcripts...

  • TableS06_FAR2O_ChIP.xlsx

    Creator:
    Bredeweg, Erin L. and Freitag, Michael
    Abstract:
    Transcription factor (TF) genes were modified endogenously to include epitope tags for identification of TF protein binding sites by Chromatin Immunoprecipitation (ChIP), followed by high throughput sequencing. We used RNA-sequencing in carbon sources of sucrose, butyrate, and oleate in far-1, far-2, and a double far-1; far-2 mutant to find transcripts...