The focus of this thesis is to design, characterize, and apply novel computational methods and molecular systems to interrogate heterogeneous human gut microbiome-related phenomena. In Chapter 2, I design, implement, and characterize a method for embedding co-occurrence patterns derived from massive 16s amplicon datasets. I use this method to 1....
Cardiovascular disease (CVD) is the leading cause of mortality in the United States (US) and research suggests that CVD morbidity and mortality disproportionately impacts Asian American and Native Hawaiian and Pacific Islander (NHPI) older adults. However, the prevalence on CVD and underlying mechanisms for CVD disparities among disaggregated Asian American...
Natural dyes have been used to color textiles for centuries, but with the shift to mass production, the use of synthetic dyes has increased due to their lower cost and easy manufacturing volume. However, synthetic dyes (such as disperse blue dyes 106 and 124) have been reported to cause skin...
This dissertation examines the impact of the German naturalist and literary figure Johann Wolfgang von Goethe’s ideas on twentieth century Anglophone plant morphology and biology. Goethe interpreted the organ forms of flowering plants as metamorphoses of each other. His literary, historical, and philosophical writings suggest themes of alienation from and...
The high level of parallelism in throughput processors such as GPGPUs has resulted in significantly changed on-chip data traffic behaviors. This demands new research to identify and address the limiting factors of networks-on-chip (NoCs) in the context of throughput processors. In this work, we first quantitatively analyze the performance of...
Here presented is a photographic catalogue, a key, and literature review for the 35 genera and 90 species of lepturine longhorn beetles (Cerambycidae: Lepturinae) found in the Pacific Northwest. Several nomenclatural changes, recognized by the global taxonomic community, but previously unknown to North American authors, are adopted, and one new...
In 1746, Dr John Buchanan, a recently retired medical officer in the British Army, produced a manuscript, 'Regimental Practice, or a Short History of Diseases common to His Majesties own Royal Regiment of Horse Guards when abroad (Commonly called the Blews).' Revised almost until the time of Buchanan's death in...
This dissertation reviews the literature on the specialty area of dolphin assisted therapy (DAT), a subfield of animal assisted therapy (AAT). To date the literature on the effectiveness of DAT has been mixed although a majority of it is positive. The study was conducted with 40 parents whose children were...
The College of Forestry Integrated Research Project (CFIRP) is an on-going experiment in the eastern Coast Range foothills of western Oregon. Started in 1989, a team of scientists, resource managers, and students at Oregon State University designed and implemented silvicultural alternatives to clearcutting. These silvicultural practices aimed to create and...
Karl Jordan (1861-1959) was an extraordinarily productive entomologist who influenced the development of systematics, entomology, and naturalists' theoretical framework as well as their practice. He has been a figure in existing accounts of the naturalist tradition between 1890 and 1940 that have defended the relative contribution of naturalists to the...