Plant form is a compromise between resource gathering, reproduction and
the tolerance to physical demands of the abiotic and biotic environment. In
an agricultural field in addition to the natural factors causing stress, humans
also introduce physical and mechanical stresses, and chemical pesticides
into the environment. Many of these factors...
A wealth of information on plant anatomy and morphology is available in the current and historical literature, and molecular biologists are producing massive amounts of transcriptome and genome data that can be used to gain better insights into the development, evolution, ecology, and physiological function of plant anatomical attributes. Integrating...
Premise of the study: Bio-ontologies are essential tools for accessing and analyzing the rapidly growing pool of plant genomic and phenomic data. Ontologies provide structured vocabularies to support consistent aggregation of data and a semantic framework for automated analyses and reasoning. They are a key component of the semantic web....
The Plant Ontology (PO;http://www.plantontology.org/" is a publicly available, collaborative effort to develop and maintain a controlled, structured vocabulary ('ontology') of terms to describe plant anatomy, morphology and the stages of plant development. The goals of the PO are to link (annotate) gene expression and phenotype data to plant structures and...
The focus of this thesis is to design, characterize, and apply novel computational methods and molecular systems to interrogate heterogeneous human gut microbiome-related phenomena. In Chapter 2, I design, implement, and characterize a method for embedding co-occurrence patterns derived from massive 16s amplicon datasets. I use this method to 1....
Vertisols and other vertic-intergrade soils are found all over the globe, including many agricultural and urban areas. These soils are characterized by their cyclical shrinking and swelling behaviors, where bulk density and porosity distribution both vary as functions of time and/or soil moisture. In turn, alterations in physical soil parameters...
Gramene (http://www.gramene.org) is an online resource for comparative functional genomics in crops and model plant species. Its two main frameworks are genomes (collaboration with Ensembl Plants) and pathways (The Plant Reactome and archival BioCyc databases). Since our last NAR update, the database website adopted a new Drupal management platform. The...
Full Text:
Kerhornou3, Brandon Walts3, Nuno
A. Fonseca3, Laura Huerta3, Maria Keays3, Y. Amy Tang3, Helen Parkinson3
Illegal fishing is a serious problem that threatens the sustainability of fisheries around the world. Historically, fisheries managers have attempted to increase the costs of illegal fishing through imposition of stricter sanctions and improvements to monitoring and enforcement programs. Non-monetary factors also influence illegal fishing behaviors, and failing to address...
There is an ever growing number of Latinas/os who reside and have settled permanently in rural America. Unbeknownst to most, rural Latinas/os face adversities unfamiliar to those living outside of this scope. As it stands, the barriers urban Latinas/os students face when transitioning to college has been well documented. However,...
The purpose of this study is to analyze women of colors's (WOC) experiences working within the United States Forest Service (USFS) accessing the challenges of recruitment, retention, and promotional efforts. Using testimonios and Anzaldúa's theory of mestiza consciousness, I found three themes that included white supremacist capitalist patriarchy, presumed incompetence,...