Oregon's estuaries are important ecosystems for scientific study. Consequently, knowledge of what research has been conducted helps us identify benchmarks and plan new projects. A comprehensive bibliography of published research, technical reports, local documents, and data sets is one means of recording this knowledge. For these reasons, the Guin Library...
Oregon's estuaries are important ecosystems for scientific study. Consequently, knowledge of what research has been conducted helps us identify benchmarks and plan new projects. A comprehensive bibliography of published research, technical reports, local documents, and data sets is one means of recording this knowledge. For these reasons, the Guin Library...
A dissertation describing the results of a series of greenhouse experiments conducted to better understand phytoremediation in stormwater bioretention systems.
Toxin production by cyanobacterial harmful algal blooms (cyanoHABs) in freshwater systems has lasting ecological and human impacts. Nutrients, light availability, hydrology, and microbial community composition impact the frequency and intensity of toxic cyanoHABs. Climate change will exacerbate toxic cyanoHABs, making real time and predictive monitoring a vital tool for managing...
Fusarium proliferatum is a fungus found in soils which produces the mycotoxin group known as fumonisins. Of human concern due to hepato-, nephro- and neurotoxicity, the threat of fumonisins lies within several food items, including corn, wheat sorghum, asparagus and, more recently, garlic. Manifesting as ““garlic rot”,” F. proliferatum infection...
The focus of this thesis is to design, characterize, and apply novel computational methods and molecular systems to interrogate heterogeneous human gut microbiome-related phenomena. In Chapter 2, I design, implement, and characterize a method for embedding co-occurrence patterns derived from massive 16s amplicon datasets. I use this method to 1....
Headwater streams represent the majority of the drainage area of a river network and provide many critical functions supporting aquatic and terrestrial ecosystem health. The riparian zones that surround these streams are transitional areas between terrestrial and stream ecosystems, which provide key habitat for aquatic and terrestrial organisms, especially during...
Orthopaedic soft tissue degenerative diseases significantly affect the population, especially as it ages. Degeneration is characterized by a progressive loss of extracellular matrix (ECM) components necessary for the proper functioning of the tissues and joints, eventually leading to pain and dysfunction. In humans, the intervertebral disc (IVD) and tendon are...