Effects of temperature and growth stage on
vegetative bud development and stem hardiness of red-osier
dogwood during winter dormancy were investigated.
Results were related to a degree growth stage model and
were used to develop models to predict growth stages, to
quantify development, and to predict hardiness.
Maximum rest development...
Explosively erupting volcanoes and megathrust earthquakes (Mw 8+ magnitude) occur at subduction zones and adjacent volcanic arcs. Volcanic eruptions are observed occurring close in time to megathrust earthquakes in the historical record from at least the 18th century CE to present in locations globally, including Japan in 1707 CE (Chesley...
Environmental mycobacteria are important opportunistic pathogens for many hosts,
including humans, cattle, and fish. Two well-studied species are Mycobacterium
avium subsp. avium, a significant cause of disseminated bacterial disease in patients
with AIDS, and Mycobacterium avium subsp. paratuberculosis, the cause of Johne’s
disease in cattle. Many other species that are...
Cystic ovarian disease (COD) is an anovulatory condition in cattle
that afflicts between 6-18% of all dairy cows in the US. Ovulation is
dependent on the plasminogen activator (PA) family of proteases
and protease inhibitor for proteolysis, culminating in follicular rupture.
Failure of the follicle to ovulate suggests an aberration...
In this thesis, we examined the effects of the exposures to anthropogenic pollutants on the fish, primarily juvenile chinook salmon, immune system using newly and recently developed immune assays. In addition, we developed a new assay for measuring immunocompetence of fish. In the first chapter, the Alamar Blue assay was...
Crystal-rich (40-50 vol.%) intermediate lava has been the primary eruptive product of several recent hazardous eruptions: Mt. Pinatubo, Philippines (1991), Soufriere Hills, Montserrat (1995-present), and Unzen, Japan (1990-1995). Despite this association with such devastating eruptions, the formation, timing, and evacuation of such magma is not well understood: do such eruptions...
Cyprinid herpesvirus 3 (CyHV-3), commonly known as koi herpesvirus (KHV), is a member of the Alloherpesviridae and is a deadly pathogen for koi and common carp, Cyprinus carpio. It causes severe gill necrosis and nephritis, dermal ulceration and hemorrhage, and mass mortality of up to 100% of affected fish. Fish...
Tannins are a diverse group of plant-produced, polyphenolic compounds with metal-chelating and antimicrobial properties that are prevalent in many soils. Using transcriptomics, we determined that tannic acid, a form of hydrolysable tannin, broadly affects the expression of genes involved in iron and zinc homeostases, sulfur metabolism, biofilm formation, motility, and...
Zinc is an important nutrient but can be lacking in some soil environments, influencing the physiology of soil-dwelling bacteria. Hence, we studied the global effect of zinc limitation on the transcriptome of the rhizosphere biocontrol strain Pseudomonas protegens Pf-5 (formerly Pseudomonas fluorescens). We observed that the expression of the putative...