Current stream tracer techniques do not allow separation of in-channel dead zone (e.g., eddies) and out-of-channel (hyporheic) transient storage, yet this separation is important to understanding stream biogeochemical processes. We characterize in-channel transient storage with a rhodamine WT solute tracer experiment in a 304 m cascade-pool-type bedrock reach with no...
We investigated the response of hyporheic exchange flow (HEF) to wood removal in a small, low-gradient, gravel bed stream in southeast Alaska using a series of groundwater models built to simulate HEF for the initial conditions immediately after wood removal and 1 month, 2 years, 4 years, and 16 years...
Hyporheic Exchange Flow (HEF) is driven by head gradients defined by the hydro-topography of the stream surface, which is controlled by the particular geomorphology of the stream. We quantified the impact of large wood, which typically exerts a strong control on stream morphology, on HEF in a second order, low...
This thesis presents a low-energy application specific digital controller for a battery-free 2.4 GHz wireless sensor network (WSN) node. The digital controller has been designed and fabricated in a standard 0.13 μm CMOS and implements a simple protocol for WSNs. Techniques such as supply voltage reduction and power gating have...
Coastal hypoxia, or low oxygen episodes pose a threat to marine resources in the Pacific Northwest. Previous research into nearshore oxygen dynamics have linked coastal upwelling to this seasonally occurring phenomenon, however the manifestation of hypoxic waters over coastal fishing grounds was not well understood. Through a partnership with Dungeness...
Development of wave and offshore wind-based marine renewable energy is anticipated on the Outer Continental Shelf (OCS) off Oregon and much of the Pacific Northwest in the coming decade. Multiple issues related to environmental considerations and information needs remain for these emerging industries. The Oregon Marine Renewable Energy Environmental Science...
This dissertation concentrates on the controlling factors on the instability of the Laurentide Ice Sheet (LIS) and their effects on abrupt climate change. Northern Hemisphere climate fluctuated abruptly during the last deglaciation possibly related to variability in Atlantic meridional overturning circulation (AMOC) and reduced aerial extent of the LIS. Reductions...
Dam removal is increasingly viewed as a river restoration tool because dams affect so many aspects of river hydrology, geomorphology, and ecology; but removal also has impacts. When a dam is removed, sediment accumulated over a dam’s lifetime may be transported downstream; and the timing, fate and consequences of this...
The primary goal of this research project is to quantitatively measure the temporal scales of hyporheic exchange along a stream network. Our goal is to examine how hyporheic exchange varies with increasing stream size. Many previous studies focus on single stream reaches or on several reaches of similar sized streams,...
The immune system is a complex network of cellular processes working in harmony to guard us against pathogenic attack. Of utmost importance is the ability of the immune system to discriminate between “self” and “non-self” and diseased versus healthy. Recognition of antigens complexed to major histocompatibility complex (MHC) molecules is...