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- Creator:
- Abrahamsen, E. Povl, Meredith, Michael P., Falkner, Kelly, Torres-Valdes, Sinhue, Leng, Melanie J., Alkire, Matthew B., Bacon, Sheldon, Laxon, Seymour W., Polyakov, Igor, and Ivanov, Vladimir
- Abstract:
- We investigate the freshwater composition of the shelf and slope of the Arctic Ocean north of the New Siberian Islands using geochemical tracer data (δ¹⁸O, Ba, and PO₄*) collected following the extreme summer of 2007. We find that the anomalous wind patterns that partly explained the sea ice minimum at...
- Resource Type:
- Article
- Full Text:
- Michael P.Meredith,1 Kelly Kenison Falkner,2 Sinhue Torres-Valdes,3 Melanie J. Leng,4 Matthew B. Alkire,2
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- Creator:
- Harriff, Melanie J.
- Abstract:
- Environmental mycobacteria are important opportunistic pathogens for many hosts, including humans, cattle, and fish. Two well-studied species are Mycobacterium avium subsp. avium, a significant cause of disseminated bacterial disease in patients with AIDS, and Mycobacterium avium subsp. paratuberculosis, the cause of Johne’s disease in cattle. Many other species that are...
- Resource Type:
- Dissertation
- Full Text:
- THE DISSERTATION OF MELANIE J. HARRIFF for the degree of Doctor of Philosophy in Molecular and
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- Creator:
- Tennessen, Jacob A., Bonner, Kaitlin M., Bollmann, Stephanie R., Johnstun, Joel A., Yeh, Jan-Ying, Marine, Melanie, Tavalire, Hannah F., Bayne, Christopher J., and Blouin, Michael S.
- Abstract:
- Background: New strategies to combat the global scourge of schistosomiasis may be revealed by increased understanding of the mechanisms by which the obligate snail host can resist the schistosome parasite. However, few molecular markers linked to resistance have been identified and characterized in snails. Methodology/Principal Findings: Here we test six...
- Resource Type:
- Article
- Full Text:
- New Locus Influencing Resistance to Schistosoma mansoni Tennessen, J. A., Bonner, K. M., Bollmann, S
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- Creator:
- Condon, Bradford J., Leng, Yueqiang, Wu, Dongliang, Bushley, Kathryn E., Ohm, Robin A., Otillar, Robert, Martin, Joel, Schackwitz, Wendy, Grimwood, Jane, MohdZainudin, NurAinIzzati, Xue, Chunsheng, Wang, Rui, Manning, Viola A., Dhillon, Braham, Tu, Zheng Jin, Steffenson, Brian J., Salamov, Asaf, Sun, Hui, Lowry, Steve, LaButti, Kurt, Han, James, Copeland, Alex, Lindquist, Erika, Barry, Kerrie, Schmutz, Jeremy, Baker, Scott E., Ciuffetti, Lynda M., Grigoriev, Igor V., Zhong, Shaobin, and Turgeon, B. Gillian
- Abstract:
- The genomes of five Cochliobolus heterostrophus strains, two Cochliobolus sativus strains, three additional Cochliobolus species (Cochliobolus victoriae, Cochliobolus carbonum, Cochliobolus miyabeanus), and closely related Setosphaeria turcica were sequenced at the Joint Genome Institute (JGI). The datasets were used to identify SNPs between strains and species, unique genomic regions, core secondary...
- Resource Type:
- Article
- Full Text:
- Metabolite, and Effector Coding Capacity across Cochliobolus Pathogens Bradford J. Condon1., Yueqiang Leng2
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- Creator:
- Deans, Andrew R., Lewis, Suzanna E., Huala, Eva, Anzaldo, Salvatore S., Ashburner, Michael, Balhoff, James P., Blackburn, David C., Blake, Judith A., Burleigh, J. Gordon, Chanet, Bruno, Cooper, Lauren D., Courtot, Mélanie, Csösz, Sándor, Cul, Hong, Dahdul, Wasila, Das, Sandip, Dececchi, T. Alexander, Dettal, Agnes, Diogo, Rui, Druzinsky, Robert E., Dumontier, Michel, Franz, Nico M., Friedrich, Frank, Gkoutos, George V., Haendel, Melissa, Harmon, Luke J., Hayamizu, Terry F., He, Yongqun, Hines, Heather M., Ibrahim, Nizar, Jackson, Laura M., Jaiswal, Pankaj, James-Zorn, Christina, Köhler, Sebastian, Lecointre, Guillaume, Lapp, Hilmar, Lawrence, Carolyn J., Le Novère, Nicolas, Lundberg, John G., Macklin, James, Mast, Austin R., Midford, Peter E., Mikó, István, Mungall, Christopher J., Oellrich, Anika, Osumi-Sutherland, David, Parkinson, Helen, Ramírez, Martín J., Richter, Stefan, Robinson, Peter N., Ruttenberg, Alan, Schulz, Katja S., Segerdell, Erik, Seltmann, Katja C., Sharkey, Michael J., Smith, Aaron D., Smith, Barry, Specht, Chelsea D., Squires, R. Burke, Thacker, Robert W., Thessen, Anne, Fernandez-Triana, Jose, Vihinen, Mauno, Vize, Peter D., Vogt, Lars, Wall, Christine E., Walls, Ramona L., Westerfeld, Monte, Wharton, Robert A., Wirkner, Christian S., Woolley, James B., Yoder, Matthew J., Zorn, Aaron M., and Mabee, Paula
- Abstract:
- Despite a large and multifaceted effort to understand the vast landscape of phenotypic data, their current form inhibits productive data analysis. The lack of a community-wide, consensus-based, human- and machine-interpretable language for describing phenotypes and their genomic and environmental contexts is perhaps the most pressing scientific bottleneck to integration across...
- Resource Type:
- Article
- Full Text:
- , Judith A. Blake9, J. Gordon Burleigh10, Bruno Chanet11, Laurel D. Cooper12, Mélanie Courtot13, Sándor