This thesis summarizes work completed over the previous four years primarily focusing on chloroplast phylogenomic inquiry into the genus Pinus and related Pinaceae outgroups using next-generation sequencing on Illumina platforms. During the time of our work, Illumina sequence read lengths have essentially been limited to 25 to 100 base pairs,...
An experimental reintroduction was performed to determine the best method to create new populations of the tuberous species Perideridia erythrorhiza, a rare vascular plant endemic to southern Oregon. Only a handful of sites are currently present, and many of these are subject to other land uses such as urban development...
• Premise of the study: The dramatic advances offered by modern DNA sequencers continue to redefine the limits of what can be accomplished in comparative plant biology. Even with recent achievements, however, plant genomes present obstacles that can make it difficult to execute large-scale population and phylogenetic studies on next-generation...
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differentiation in a number of pine species
( Whittall et al., 2010 ). These studies highlighted a challenge
Plagiobothrys hirtus (Boraginaceae) is a state and federally listed endangered plant found only in Douglas County, Oregon. This vernal pool endemic has historically been threatened by agricultural conversion of seasonal wetlands in the Sutherlin area, and is currently being eradicated as habitat is lost due to the rapid urban development...
Accurate taxonomy is essential to preservation and management of native
grasses. Four problems in fescue taxonomy were investigated: the identity of the
native fescue that dominates western Oregon and Washington prairies, the relationship
of native Festuca roemeri to closely related grasses, the status of F. howellii and F.
washingtonica, and...