Finding Our Way through Phenotypes Public Deposited

http://ir.library.oregonstate.edu/concern/articles/6108vd10d

This is the publisher’s final pdf. The published article is copyrighted by the author(s) and published by the Public Library of Science. The published article can be found at:  http://journals.plos.org/plosbiology/.

Descriptions

Attribute NameValues
Creator
Abstract or Summary
  • Despite a large and multifaceted effort to understand the vast landscape of phenotypic data, their current form inhibits productive data analysis. The lack of a community-wide, consensus-based, human- and machine-interpretable language for describing phenotypes and their genomic and environmental contexts is perhaps the most pressing scientific bottleneck to integration across many key fields in biology, including genomics, systems biology, development, medicine, evolution, ecology, and systematics. Here we survey the current phenomics landscape, including data resources and handling, and the progress that has been made to accurately capture relevant data descriptions for phenotypes. We present an example of the kind of integration across domains that computable phenotypes would enable, and we call upon the broader biology community, publishers, and relevant funding agencies to support efforts to surmount today’s data barriers and facilitate analytical reproducibility.
Resource Type
DOI
Date Available
Date Issued
Citation
  • Deans, A. R., Lewis, S. E., Huala, E., Anzaldo, S. S., Ashburner, M., et al. (2015). Finding Our Way through Phenotypes. PLoS Biology, 13(1), e1002033. doi:10.1371/journal.pbio.1002033
Series
Rights Statement
Funding Statement (additional comments about funding)
Publisher
Peer Reviewed
Language
Replaces
Additional Information
  • description.provenance : Submitted by Erin Clark (erin.clark@oregonstate.edu) on 2015-03-17T20:52:50Z No. of bitstreams: 2 license_rdf: 1370 bytes, checksum: cd1af5ab51bcc7a5280cf305303530e9 (MD5) CooperLaurelBotanyPlantPathologyFindingOurWay.pdf: 3536056 bytes, checksum: e29ae1d4f8a8182828174eaaee740258 (MD5)
  • description.provenance : Made available in DSpace on 2015-03-17T20:53:08Z (GMT). No. of bitstreams: 2 license_rdf: 1370 bytes, checksum: cd1af5ab51bcc7a5280cf305303530e9 (MD5) CooperLaurelBotanyPlantPathologyFindingOurWay.pdf: 3536056 bytes, checksum: e29ae1d4f8a8182828174eaaee740258 (MD5) Previous issue date: 2015-01-06
  • description.provenance : Approved for entry into archive by Erin Clark(erin.clark@oregonstate.edu) on 2015-03-17T20:53:08Z (GMT) No. of bitstreams: 2 license_rdf: 1370 bytes, checksum: cd1af5ab51bcc7a5280cf305303530e9 (MD5) CooperLaurelBotanyPlantPathologyFindingOurWay.pdf: 3536056 bytes, checksum: e29ae1d4f8a8182828174eaaee740258 (MD5)

Relationships

Parents:

This work has no parents.

Last modified

Downloadable Content

Download PDF

Items