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Genome sequence of a white rot fungus Schizopora paradoxa KUC8140 for wood decay and mycoremediation Public Deposited

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  • Schizopora paradoxa KUC8140 is a white rot wood degrader commonly found in Korea. Tolerance to heavy metals and polycyclic aromatic hydrocarbons and dye decolorization activity make this strain a potential candidate for mycoremediation. We report the genome sequence of S. paradoxa KUC8140 containing 44.4 Mbp. Based on ab initio gene prediction, homology search and RNA-seq, total 17,098 gene models were annotated. We identified 17 lignin-modifying peroxidases and other 377 carbohydrate-active enzymes for modeling lignocellulose deconstruction and mycoremediation.
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  • Min, B., Park, H., Jang, Y., Kim, J. J., Kim, K. H., Pangilinan, J., ... & Choi, I. G. (2015). Genome sequence of a white rot fungus Schizopora paradoxa KUC8140 for wood decay and mycoremediation. Journal of Biotechnology, 211, 42-43. doi:10.1016/j.jbiotec.2015.06.426
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  • This work is supported by Korea University and the Cooperative Research Program for Agriculture Science & Technology Development (Project No. PJ01044003) Rural Development Administration, Republic of Korea. The work conducted by Joint Genome Institute is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.
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  • description.provenance : Made available in DSpace on 2015-10-20T16:42:56Z (GMT). No. of bitstreams: 1 SpataforaJosephBotanyPlantPathGenomeSequenceWhite.pdf: 432457 bytes, checksum: 7e6c818b07dbbf9884b08c80dee19b20 (MD5) Previous issue date: 2015-10-10
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