Supporting Information is available online at: http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0158221#sec017
Data Availability Statement: DNA sequences from Sanger sequencing of the indel containing fragments derived from this study have been deposited in GenBank (Accession numbers: KU201020- KU201034). Next-generation sequences supporting this study are available from the NCBI GenBank as BioProject PRJNA269970 (SRA Accessions SRS954648, SRS954649, and SRS954650, SRX1050444-1050539). SRA accession numbers of the next-generation sequencing data of the two DNApools are SRR3624658 (Q. robur) and SRR3624680 (Q. mongolica). Draft chloroplast genome references will be submitted to Dryad soon. The open source software Variant Tools is available on https://github. com/ThuenenFG/varianttools.
To the best of our knowledge, one or more authors of this paper were federal employees when contributing to this work. This is the publisher’s final pdf. The article was published by the Public Library of Science and is in the public domain. The published article can be found at: http://www.plosone.org/
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