TableS10_MIPS-FAR2-RNAfiltered.xlsx

Dataset

Public Deposited

Citeable URL: https://ir.library.oregonstate.edu/concern/datasets/jd473234h

Descriptions

Attribute Name	Values
Creator	Bredeweg, Erin L. Freitag, Michael
Abstract	Transcription factor (TF) genes were modified endogenously to include epitope tags for identification of TF protein binding sites by Chromatin Immunoprecipitation (ChIP), followed by high throughput sequencing. We used RNA-sequencing in carbon sources of sucrose, butyrate, and oleate in far-1, far-2, and a double far-1; far-2 mutant to find transcripts influenced by FAR regulation. This dataset includes (1) ChIP peaks indicative of genomic binding locations of FAR-1 and FAR-2 (4 files), (2) analysis of gene ontology (GO) by two methods (4 files), and (3) total RNA-sequencing for wild type, delta-far-1, delta-far-2, and delta-far-1; delta-far-2 mutants, with differential expression as evaluated by CuffDiff (2 files).
Keyword	beta-oxidation cutinase transcription factor transcription factor network glyoxylate cycle lipase fatty acid regulator
Rights Statement	No Copyright - United States
Related Items	See related Ph.D. dissertation.

Parents:

Thumbnail	Title	Date Uploaded	Visibility	Actions
	TableS10_MIPS-FAR2-RNAfiltered.xlsx	2017-12-04	Public	Download