Supplemental data to "The genome and transcriptome of common milkweed (Asclepias syriaca): resources for evolutionary, ecological, and molecular studies in milkweeds and Apocynaceae" Public Deposited

http://ir.library.oregonstate.edu/concern/datasets/vd66w525h

Descriptions

Attribute NameValues
Creator
Contributors
Abstract or Summary
  • This dataset contains a draft assembly of the common milkweed (Asclepias syriaca) nuclear genome, linkage group information, and gene family counts for Asclepias and related species. The genome assembly is accompanied by annotation of gene models, repeat models, transfer RNAs, and open reading frames, and mapping information of Asclepias transcripts, Calotropis transcripts, and Coffea proteins onto the assembled scaffolds. The linkage group information includes data input into the linkage group analysis, R scripts for processing, and a final list of scaffolds assigned to linkage groups. Additional data includes the coding sequence alignment of P5βR paralogs described in the article and a table of gene family counts in Asclepias, other Apocynaceae, coffee (Coffea), and grape (Vitis).
License
Resource Type
DOI
Citation
  • Weitemier, Kevin A. (2017): Supplemental data to "The genome and transcriptome of common milkweed (Asclepias syriaca): resources for evolutionary, ecological, and molecular studies in milkweeds and Apocynaceae". Oregon State University. Dataset. https://doi.org/10.7267/N9M61HDR
Academic Affiliation
Subject
Rights Statement
Related Items
Funding Statement (additional comments about funding)
Publisher
Language
Additional Information
  • Related item: Weitemier, K. A. (2016). Genomic Investigations of Diversity within the Milkweed Genus Asclepias, at Multiple Scales (Doctoral dissertation).
Embargo reason
  • Intellectual Property (patent, etc.)

Relationships

Parents:

This work has no parents.

Last modified
No preview available

Download the file

Items