Plant Ontology (PO): a controlled vocabulary of plant structures and growth stages Public Deposited

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This is the publisher’s final pdf. The published article is copyrighted by Hindawi Publishing Corporation and can be found at:  http://www.hindawi.com/journals/ijg/. The journal title, Comparative and Functional Genomics, has been changed to the International Journal of Genomics.

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  • The Plant Ontology Consortium (POC) (www.plantontology.org) is a collaborative effort among several plant databases and experts in plant systematics, botany and genomics. A primary goal of the POC is to develop simple yet robust and extensible controlled vocabularies that accurately reflect the biology of plant structures and developmental stages. These provide a network of vocabularies linked by relationships (ontology) to facilitate queries that cut across datasets within a database or between multiple databases. The current version of the ontology integrates diverse vocabularies used to describe Arabidopsis, maize and rice (Oryza sp.) anatomy, morphology and growth stages. Using the ontology browser, over 3500 gene annotations from three species-specific databases, The Arabidopsis Information Resource (TAIR) for Arabidopsis, Gramene for rice and MaizeGDB for maize, can now be queried and retrieved.
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  • Jaiswal, P., Avraham, S., Ilic, K., Kellogg, E. A., McCouch, S., Pujar, A., ... & Zapata, F. (2005). Plant Ontology (PO): a controlled vocabulary of plant structures and growth stages. Comparative and Functional Genomics, 6(7‐8), 388-397. doi:10.1002/cfg.496
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  • description.provenance : Submitted by Erin Clark (erin.clark@oregonstate.edu) on 2014-08-05T19:50:26Z No. of bitstreams: 2 license_rdf: 1370 bytes, checksum: cd1af5ab51bcc7a5280cf305303530e9 (MD5) JaiswalPankajBotanyPlantPathologyPlantOntologyControlled.pdf: 584958 bytes, checksum: 87ed9f3af0cffd19b370f5651be70b34 (MD5)
  • description.provenance : Made available in DSpace on 2014-08-05T19:50:40Z (GMT). No. of bitstreams: 2 license_rdf: 1370 bytes, checksum: cd1af5ab51bcc7a5280cf305303530e9 (MD5) JaiswalPankajBotanyPlantPathologyPlantOntologyControlled.pdf: 584958 bytes, checksum: 87ed9f3af0cffd19b370f5651be70b34 (MD5) Previous issue date: 2005-10
  • description.provenance : Approved for entry into archive by Erin Clark(erin.clark@oregonstate.edu) on 2014-08-05T19:50:40Z (GMT) No. of bitstreams: 2 license_rdf: 1370 bytes, checksum: cd1af5ab51bcc7a5280cf305303530e9 (MD5) JaiswalPankajBotanyPlantPathologyPlantOntologyControlled.pdf: 584958 bytes, checksum: 87ed9f3af0cffd19b370f5651be70b34 (MD5)

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