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Browsing Faculty Research Publications (Botany and Plant Pathology) by Title

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Browsing Faculty Research Publications (Botany and Plant Pathology) by Title

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  • Monaco, Marcela K.; Sen, Taner Z.; Dharmawardhana, Palitha D.; Ren, Liya; Schaeffer, Mary; Naithani, Sushma; Amarasinghe, Vindhya; Thomason, Jim; Harper, Lisa; Gardiner, Jack; Cannon, Ethalinda K.S.; Lawrence, Carolyn J.; Ware, Doreen; Jaiswal, Pankaj (Crop Science Society of America, 2013-03)
    A framework for understanding the synthesis and catalysis of metabolites and other biochemicals by proteins is crucial for unraveling the physiology of cells. To create such a framework for Zea mays L. subsp. mays (maize ...
  • Smith, MacKenzie A.; Rothwell, Gar W.; Stockey, Ruth A. (University of Chicago Press, 2015-03)
    Premise of research: A distinctive new species of osmundaceous fern, based on a permineralized trunk from Lower Cretaceous deposits of Haida Gwaii (formerly the Queen Charlotte Islands) off the west coast of mainland C ...
  • Pethybridge, Sarah J.; Gent, David H.; Groom, Tim; Hay, Frank S. (The American Phytopathological Society, 2013-11)
    The most damaging foliar disease of pyrethrum in Australia is ray blight caused by Stagonosporopsis tanaceti. The probability of growers incurring economic losses caused by this disease has been substantially reduced ...
  • Elliott, Todd F.; Bougher, Neale L.; O'Donnell, Kerry; Trappe, James M. (Allen Press Inc., 2014-01)
    An abundant fruiting of a black morel was encountered in temperate northwestern New South Wales (NSW), Australia, during a mycological survey in Sep 2010. The site was west of the Great Dividing Range in a young, dry ...
  • Chen, Ming-Jun; Huang, Bo; Li, Zeng-Zhi; Spatafora, Joseph (Mycotaxon, Ltd., 2013-04)
    —Beauveria sinensis sp. nov. was isolated from a larva of Geometridae (Lepidoptera) collected from Tiantangzhai, Anhui province, China. It is characterized by elongated ellipsoidal to cylindrical conidia, solitary coni ...
  • Vazquez, M. Dolores; Zemetra, Robert; Peterson, C. James; Chen, Xianming M.; Heesacker, Adam; Mundt, Christopher C. (Springer, 2015-07)
    Stripe rust is a foliar disease of wheat (Triticum aestivum L.) caused by the air-borne fungus Puccinia striiformis f. sp. tritici and is present in most regions around the world where commercial wheat is grown. Breeding ...
  • Cronn, Richard; Liston, Aaron; Parks, Matthew; Gernandt, David S.; Shen, Rongkun; Mockler, Todd (Oxford University Press, 2008-07-21)
    Organellar DNA sequences are widely used in evolutionary and population genetic studies, however, the conservative nature of chloroplast gene and genome evolution often limits phylogenetic resolution and statistical powe ...
  • Kimbrel, Jeffrey A.; Thomas, William J.; Jiang, Yuan; Creason, Allison L.; Thireault, Caitlin A.; Sachs, Joel L.; Chang, Jeff H. (Public Library of Science, 2013-02-28)
    Two diametric paradigms have been proposed to model the molecular co-evolution of microbial mutualists and their eukaryotic hosts. In one, mutualist and host exhibit an antagonistic arms race and each partner evolves rap ...
  • Amari, Khalid; Di Donato, Martin; Dolja, Valerian V.; Heinlein, Manfred (Public Library of Science, 2014-10-16)
    Viruses are obligatory parasites that depend on host cellular factors for their replication as well as for their local and systemic movement to establish infection. Although myosin motors are thought to contribute to pl ...
  • Manning, Viola A.; Ciuffetti, Lynda M. (Public Library of Science, 2015-04-06)
    Pyrenophora tritici-repentis, the causal agent of tan spot disease of wheat, mediates disease by the production of host-selective toxins (HST). The known toxins are recognized in an 'inverse' gene-for-gene manner, where ...
  • Okrent, Rachel A.; Halgren, Anne B.; Azevedo, Mark D.; Chang, Jeff H.; Mills, Dallice I.; Armstrong, Donald J.; et al. (Society for General Microbiology, 2014-08-27)
    Pseudomonas fluorescens WH6 secretes a germination-arrest factor (GAF) that we have identified previously as 4-formylaminooxyvinylglycine. GAF irreversibly inhibits germination of the seeds of numerous grassy weeds and ...
  • Sheard, John W.; McCune, Bruce; Tønsberg, Tor (The American Bryological and Lichenological Society, Inc., 2014-07-30)
    Rinodina pallidescens is described as a new species, endemic to southern Alaska. Rinodina buckii and R. oregana are discussed in terms of their range extensions and possible phytogeographic histories.
  • Yospin, Gabriel I.; Bridgham, Scott D.; Neilson, Ronald P.; Bolte, John P.; et al. (Ecological Society of America, 2015-01)
    We developed a new climate-sensitive vegetation state-and-transition simulation model (CV-STSM) to simulate future vegetation at a fine spatial grain commensurate with the scales of human land-use decisions, and under ...
  • Shen, Qingxi J.; Yu, Diqiu; Jeon, Jong-Seong; Piffanelli, Pietro; Abbruscato, Pamela; Guo, Ze-Jian; Zhang, Yuanji; Itoh, Takeshi; Lee, Sung S.; Buell, C. Robin; Nagato, Yasuo; McCouch, Susan; Yano, Masahiro; Wang, Guo-liang; Jena, Kshirod K.; Xiong, Lizhong; Meyers, Blake; Jaiswal, Pankaj; Yamazaki, Yukiko (Springer, 2012-02-27)
    Background: Since whole genome sequences of rice were made publically accessible, the number of articles on new rice genes has increased remarkably. The Committee on Gene Symbolization, Nomenclature and Linkage (CGSNL) o ...
  • Rosso, Abbey; Neitlich, Peter; Smith, Robert J. (Public Library of Science, 2014-07-31)
    Terrestrial lichen biomass is an important indicator of forage availability for caribou in northern regions, and can indicate vegetation shifts due to climate change, air pollution or changes in vascular plant community ...
  • McCune, Bruce (IAVS Opulus Press, Uppsala, 2006)
    Questions: Can a statistical model be designed to represent more directly the nature of organismal response to multiple interacting factors? Can multiplicative ernel smoothers be used for this purpose? What advantages do ...
  • Seguin, Jonathan; Rajeswaran, Rajendran; Malpica-López, Nachelli; Martin, Robert R.; Kasschau, Kristin; Dolja, Valerian V.; Otten, Patricia; Farinelli, Laurent; Pooggin, Mikhail M. (Public Library of Science, 2014-02-11)
    Virus-infected plants accumulate abundant, 21–24 nucleotide viral siRNAs which are generated by the evolutionary conserved RNA interference (RNAi) machinery that regulates gene expression and defends against invasive nu ...
  • Walls, Ramona L.; Athreya, Balaji; Cooper, Laurel; Elser, Justin; Gandolfo, Maria A.; Jaiswal, Pankaj; Mungall, Christopher J.; Preece, Justin; Rensing, Stefan; Smith, Barry; Stevenson, Dennis W. (Botanical Society of America, 2012-08)
    Premise of the study: Bio-ontologies are essential tools for accessing and analyzing the rapidly growing pool of plant genomic and phenomic data. Ontologies provide structured vocabularies to support consistent aggregati ...
  • Oellrich, Anika; Walls, Ramona L.; Cannon, Ethalinda K. S.; Cooper, Laurel; Jaiswal, Pankaj; Moore, Laura; et al. (BioMed Central Ltd., 2015-02-25)
    BACKGROUND: Plant phenotype datasets include many different types of data, formats, and terms from specialized vocabularies. Because these datasets were designed for different audiences, they frequently contain language ...
  • Kumar, T.K. Arun; Healy, Rosanne; Spatafora, Joseph W.; Blackwell, Meredith; McLaughlin, David J. (The Mycological Society of America, 2012-03)
    Molecular phylogenctic analyses indicate that the monophyletic classes Orbiliomycetes and Pezizomycetes are among the earliest diverging branches of Pezizomycotina, the largest subphylum of the Ascomycota. Although Orbil ...

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