Index Catalog // ScholarsArchive@OSU

Chloroplast DNA characters, phylogeny, and classification of Lathyrus (Fabaceae)

Creator:: Asmussen, Conny B. and Liston, Aaron
Abstract:: Mapped cpDNA restriction site characters were analyzed cladistically and the resulting phylogenetic hypotheses were used to test monophyly and relationships of the infrageneric classification of Lathyrus (Fabaceae) proposed by Kupicha (1983, Notes from the Royal Botanic Garden Edinburgh 41: 209–244). The validity of previously proposed classification systems and questions presented...
Resource Type:: Article
Full Text:: –401. 1998. CHLOROPLAST DNA CHARACTERS, PHYLOGENY, AND CLASSIFICATION OF LATHYRUS (FABACEAE)1 CONNY B

Phylogenetic marker development for target enrichment from transcriptome and genome skim data: the pipeline and its application in southern African Oxalis (Oxalidaceae)

Creator:: Schmickl, Roswitha, Liston, Aaron, Zeisek, Vojtěch, Oberlander, Kenneth, Weitemier, Kevin, Straub, Shannon C. K., Cronn, Richard C., Dreyer, Léanne L., and Suda, Jan
Abstract:: Phylogenetics benefits from using a large number of putatively independent nuclear loci and their combination with other sources of information, such as the plastid and mitochondrial genomes. To facilitate the selection of orthologous low‐copy nuclear (LCN) loci for phylogenetics in nonmodel organisms, we created an automated and interactive script to...
Resource Type:: Article
Full Text:: : Schmickl, R. , Liston, A. , Zeisek, V. , Oberlander, K. , Weitemier, K. , Straub, S. C., Cronn, R. C

Population structure and genetic diversity of Botrychium pumicola (Ophioglossaceae) based on inter-simple sequence repeats (ISSR)

Creator:: Camacho, Francisco J. and Liston, Aaron
Abstract:: Species of Botrychium reproduce by spores that form subterranean gametophytes and a few, like B. pumicola, also reproduce asexually with subterranean sporophytic gemmae. The goal of this study was to examine the genetic diversity of B. pumicola populations and to better understand the role of gemmae. Ninety-nine individuals from three...
Resource Type:: Article
Full Text:: Botrychium reproduce by spores that form subterranean gametophytes and a few, like B. pumicola, also

Repeat intercontinental dispersal and Pleistocene speciation in disjunct Mediterranean and desert Senecio (Asteraceae)

Creator:: Coleman, Max, Liston, Aaron, Kadereit, Joachim W., and Abbott, Richard J.
Abstract:: To explore the biogeographic history of Mediterranean/arid plant disjunctions, Old and New World Senecio sect. Senecio were analyzed phylogenetically using nuclear ribosomal DNA sequences (ITS). A clade corresponding to sect. Senecio was strongly supported. Area optimization indicated this clade to be of southern African origin. The Mediterranean and southern African...
Resource Type:: Article
Full Text:: clock (BP * SD) Average clock (BP * SD) A B C D E F G 0.03633 * 0.0084 0.02987 * 0.0077 0.02259

Evolutionary relationships among Pinus (Pinaceae) subsections inferred from multiple low-copy nuclear loci

Creator:: Syring, John, Willyard, Ann, Cronn, Richard, and Liston, Aaron
Abstract:: Sequence data from nrITS and cpDNA have failed to fully resolve phylogenetic relationships among Pinus species. Four low‐copy nuclear genes, developed from the screening of 73 mapped conifer anchor loci, were sequenced from 12 species representing all subsections. Individual loci do not uniformly support either the nrITS or cpDNA hypotheses...
Resource Type:: Article
Full Text:: ; GenBank X67714). This locus corresponds to a chlorophyll A/B bind- ing protein type II 1B precursor gene

Functional androdioecy in the flowering plant Datisca glomerata

Creator:: Liston, Aaron, Rieseberg, Loren H., and Elias, Thomas S.
Abstract:: This scanned article is provided to correct an error on the publisher’s website. The online version has incorrectly given the first author name as “Listen, Aaron” rather than the correct, “Liston, Aaron.” If using this article, please cite the first author correctly.
Resource Type:: Article
Full Text:: (George Allen & Unwin, London, 1986). 16. Chandler, J. M., Jan, C. & Beard, B. H. Syst Bot. 11, 353-371

Bioclimatic, ecological, and phenotypic intermediacy and high genetic admixture in a natural hybrid of octoploid strawberries

Creator:: Salamone, Isabella, Govindarajulu, Rajanikanth, Falk, Stacey, Parks, Matthew, Liston, Aaron, and Ashnam, Tia-Lynn
Abstract:: Premise of the Study: Hybrid zones provide "natural laboratories" for understanding the processes of selection, reinforcement, and speciation. We sought to gain insight into the degree of introgression and the extent of ecological-phenotypic intermediacy in the natural hybrid strawberry, Fragaria x ananassa subsp. cuneifolia. Methods: We used whole-plastome sequencing to...
Resource Type:: Article
Full Text:: 2013. The authors thank C. Morton and B. Isaac at the Carnegie Museum of Natural History; the

Phylogenetic insights into the correlates of dioecy in meadow-rues (Thalictrum, Ranunculaceae)

Creator:: Soza, Valerie L., Brunet, Johanne, Liston, Aaron, Smith, Patricia Salles, and Di Stilio, Veronica S.
Abstract:: Numerous studies have examined the evolution of sexual systems in angiosperms, but few explore the interaction between these and the evolution of pollination mode. Wind pollination is often associated with unisexual flowers, but which evolved first and played a causative role in the evolution of the other is unclear. Thalictrum,...
Resource Type:: Article
Full Text:: meadow-rues (Thalictrum, Ranunculaceae) Valerie L. Soza a, Johanne Brunet b, Aaron Liston c, Patricia

Separating the wheat from the chaff: mitigating the effects of noise in a plastome phylogenomic data set from Pinus L. (Pinaceae)

Creator:: Parks, Matthew, Cronn, Richard, and Liston, Aaron
Abstract:: Background: Through next-generation sequencing, the amount of sequence data potentially available for phylogenetic analyses has increased exponentially in recent years. Simultaneously, the risk of incorporating ‘noisy’ data with misleading phylogenetic signal has also increased, and may disproportionately influence the topology of weakly supported nodes and lineages featuring rapid radiations and/or...
Resource Type:: Article
Full Text:: 130000B ra n ch s co re /p ar ti ti o n m et ri c va lu e a) b) n A partitin Figure 3

Insights into phylogeny, sex function and age of Fragaria based on whole chloroplast genome sequencing

Creator:: Njuguna, Wambui, Liston, Aaron, Cronn, Richard, Ashman, Tia-Lynn, and Bassil, Nahla
Abstract:: The cultivated strawberry is one of the youngest domesticated plants, developed in France in the 1700s from chance hybridization between two western hemisphere octoploid species. However, little is known about the evolution of the species that gave rise to this important fruit crop. Phylogenetic analysis of chloroplast genome sequences of...
Resource Type:: Article
Full Text:: ), rcronn@fs.fed.us (R. Cronn) nahla.bassil@ars.usda.gov (N. Bassil). a b s t r a c t The cultivated

ScholarsArchive@OSU

Chloroplast DNA characters, phylogeny, and classification of Lathyrus (Fabaceae)

Phylogenetic marker development for target enrichment from transcriptome and genome skim data: the pipeline and its application in southern African Oxalis (Oxalidaceae)

Population structure and genetic diversity of Botrychium pumicola (Ophioglossaceae) based on inter-simple sequence repeats (ISSR)

Repeat intercontinental dispersal and Pleistocene speciation in disjunct Mediterranean and desert Senecio (Asteraceae)

Evolutionary relationships among Pinus (Pinaceae) subsections inferred from multiple low-copy nuclear loci

Functional androdioecy in the flowering plant Datisca glomerata

Bioclimatic, ecological, and phenotypic intermediacy and high genetic admixture in a natural hybrid of octoploid strawberries

Phylogenetic insights into the correlates of dioecy in meadow-rues (Thalictrum, Ranunculaceae)

Separating the wheat from the chaff: mitigating the effects of noise in a plastome phylogenomic data set from Pinus L. (Pinaceae)

Insights into phylogeny, sex function and age of Fragaria based on whole chloroplast genome sequencing

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