Index Catalog // ScholarsArchive@OSU

Inferring Patterns and Processes of Emergence in Clonal Phytophthora Epidemics using Population Genomic Approaches

Creator:: Cauldron, Nicholas C.
Abstract:: Oomycete and fungal pathogens threaten food, fiber, and forests around the world. With climate change, these pathogens are expected to emerge more frequently. Evolution can facilitate their emergence through mechanisms such as mutations that change or expand host range. Characterizing evolutionary mechanisms in plant pathogens will contribute to our ability...
Resource Type:: Dissertation
Full Text:: . Abstract approved: ______________________________________________________ Niklaus J. Grünwald

Vegetation, Bryophytes, Lichens, Environment, and Stand Dynamics in Forests of the Swan Valley, Montana

Creator:: McCune, Bruce and Antos, Joseph A.
Abstract:: We sampled vegetation, bryophytes, lichens, environment, and stand dynamics in 56 plots in the Swan Valley, Montana in 1975-1978. The data include complete inventory of trees in 375 m2 plots, with whole-plot ocular estimates of plant cover by species, transect sampling of the ground layer bryophytes and lichens with microplots,...
Resource Type:: Dataset
Full Text:: Parmelia sulcata percent cover Parmelia sulcata Includes P. hygrophila Epiphytes 23 Parmambi Parmeliopsis

Development of Computational, Visualization, and Molecular Tools for Fungal and Oomycete Community Ecology

Creator:: Foster, Zachary Stephen Longiaru
Abstract:: Oomycetes are an important group of organisms with a variety of ecological roles similar to fungi. Although many are well-studied plant pathogens known for their devastating effects on agricultural systems, most are little-studied saprobes and parasites of plants and animals in nearly every ecosystem on earth. The advent of affordable...
Resource Type:: Dissertation
Full Text:: Oomycete Community Ecology Abstract approved: Niklaus J. Grünwald Oomycetes are an important group of

Susceptibility of Hop Crown Buds to Powdery Mildew and its Relation to Perennation of Podosphaera macularis

Creator:: Gent, David H., Claassen, Briana J., Twomey, Megan C., Wolfenbarger, Sierra N., and Woods, Joanna L.
Abstract:: In the Pacific Northwestern United States, the hop powdery mildew fungus, Podosphaera macularis, survives overwintering periods in association with living host tissue because the ascigerious stage of the pathogen is not known to occur in this region. Field experiments were conducted over a 5-year period to describe the overwintering process...
Resource Type:: Article
Full Text:: and Plant Pathology, Oregon State University, Corvallis 97331; and Briana J. Claassen, Megan C. Twomey

Finding Our Way through Phenotypes

Creator:: Deans, Andrew R., Lewis, Suzanna E., Huala, Eva, Anzaldo, Salvatore S., Ashburner, Michael, Balhoff, James P., Blackburn, David C., Blake, Judith A., Burleigh, J. Gordon, Chanet, Bruno, Cooper, Lauren D., Courtot, Mélanie, Csösz, Sándor, Cul, Hong, Dahdul, Wasila, Das, Sandip, Dececchi, T. Alexander, Dettal, Agnes, Diogo, Rui, Druzinsky, Robert E., Dumontier, Michel, Franz, Nico M., Friedrich, Frank, Gkoutos, George V., Haendel, Melissa, Harmon, Luke J., Hayamizu, Terry F., He, Yongqun, Hines, Heather M., Ibrahim, Nizar, Jackson, Laura M., Jaiswal, Pankaj, James-Zorn, Christina, Köhler, Sebastian, Lecointre, Guillaume, Lapp, Hilmar, Lawrence, Carolyn J., Le Novère, Nicolas, Lundberg, John G., Macklin, James, Mast, Austin R., Midford, Peter E., Mikó, István, Mungall, Christopher J., Oellrich, Anika, Osumi-Sutherland, David, Parkinson, Helen, Ramírez, Martín J., Richter, Stefan, Robinson, Peter N., Ruttenberg, Alan, Schulz, Katja S., Segerdell, Erik, Seltmann, Katja C., Sharkey, Michael J., Smith, Aaron D., Smith, Barry, Specht, Chelsea D., Squires, R. Burke, Thacker, Robert W., Thessen, Anne, Fernandez-Triana, Jose, Vihinen, Mauno, Vize, Peter D., Vogt, Lars, Wall, Christine E., Walls, Ramona L., Westerfeld, Monte, Wharton, Robert A., Wirkner, Christian S., Woolley, James B., Yoder, Matthew J., Zorn, Aaron M., and Mabee, Paula
Abstract:: Despite a large and multifaceted effort to understand the vast landscape of phenotypic data, their current form inhibits productive data analysis. The lack of a community-wide, consensus-based, human- and machine-interpretable language for describing phenotypes and their genomic and environmental contexts is perhaps the most pressing scientific bottleneck to integration across...
Resource Type:: Article
Full Text:: with nanopatterned cicada wing surfaces. Biophys J 104: 835–840. 3. Ma KY, Chirarattananon P, Fuller

Physconia labrata, a new species from western North America and Asia

Creator:: Esslinger, Theodore L., McCune, Bruce, and Haughland, Diane L.
Abstract:: A new species belonging to the lichen genus Physconia is described from Alaska and the Canadian and American Rocky Mountains and adjacent forested regions. It is also reported from China, Nepal, India and Siberia. The new species, Physconia labrata, is superficially similar to P. perisidiosa, but can be distinguished by...
Resource Type:: Article
Full Text:: P. perisidiosa, but can be distinguished by having a blackened, corticate lower surface and a

Formation of Complexes at Plasmodesmata for Potyvirus Intercellular Movement Is Mediated by the Viral Protein P3N-PIPO

Creator:: Wei, Taiyun, Zhang, Changwei, Hong, Jian, Xiong, Ruyi, Kasschau, Krisitin D., Zhou, Xueping, Carrington, James C., and Wang, Aiming
Abstract:: Intercellular transport of viruses through cytoplasmic connections, termed plasmodesmata (PD), is essential for systemic infection in plants by viruses. Previous genetic and ultrastructural data revealed that the potyvirus cyclindrical inclusion (CI) protein is directly involved in cell-to-cell movement, likely through the formation of conical structures anchored to and extended through...
Resource Type:: Article
Full Text:: facilitate the intercellular movement of potyviruses in infected plants. Citation: Wei T, Zhang C, Hong J

RNA-Seq analysis of early infected potato leaves by potato virus Y in resistant and susceptible potato varieties

Creator:: Goyer, Aymeric, Hamlin, Launa, Crosslin, James M., Buchanan, Alex, and Chang, Jeff H.
Abstract:: Background Potato Virus Y (PVY) is one of the most important plant viruses affecting potato production. The interactions between potato and PVY are complex and the outcome of the interactions depends on the potato genotype, the PVY strain, and the environmental conditions. A potato cultivar can induce resistance to a...
Resource Type:: Article
Full Text:: two different hosts. Table 2 Number of DE genes (p and q < 0.05) as determined by two different

Fire and Grazing Influence Site Resistance to Bromus tectorum Through Their Effects on Shrub, Bunchgrass and Biocrust Communities in the Great Basin (USA)

Creator:: Condon, Lea A. and Pyke, David A.
Abstract:: Shrubs, bunchgrasses and biological soil crusts (biocrusts) are believed to contribute to site resistance to plant invasions in the presence of cattle grazing. Although fire is a concomitant disturbance with grazing, little is known regarding their combined impacts on invasion resistance. We are the first to date to test the...
Resource Type:: Article
Full Text:: .) Barkworth, Elymus elymoides (Raf.) Swezy, Poa secunda J. Presl, and Pseudoroegneria spicata (Pursch) Á

The Willamette Valley (Oregon) Prairie Plant Trait Dataset

Creator:: Clark, Deborah and Wilson, Mark V.
Abstract:: The Willamette Valley (Oregon) Prairie Plant Trait Dataset is a compilation of plant traits of species important in upland prairies, wetland prairies, vernal pools, and emergent wetlands, and in the restoration of prairies and wetlands of the Willamette Valley of Oregon. These species are also found widely throughout the Pacific...
Resource Type:: Dataset
Full Text:: establishment Q Growth_form_Corn From Cornelissen, J. H. C. , P. Castro Diez and R. Hunt 1996. Seedling

ScholarsArchive@OSU

Inferring Patterns and Processes of Emergence in Clonal Phytophthora Epidemics using Population Genomic Approaches

Vegetation, Bryophytes, Lichens, Environment, and Stand Dynamics in Forests of the Swan Valley, Montana

Development of Computational, Visualization, and Molecular Tools for Fungal and Oomycete Community Ecology

Susceptibility of Hop Crown Buds to Powdery Mildew and its Relation to Perennation of Podosphaera macularis

Finding Our Way through Phenotypes

Physconia labrata, a new species from western North America and Asia

Formation of Complexes at Plasmodesmata for Potyvirus Intercellular Movement Is Mediated by the Viral Protein P3N-PIPO

RNA-Seq analysis of early infected potato leaves by potato virus Y in resistant and susceptible potato varieties

Fire and Grazing Influence Site Resistance to Bromus tectorum Through Their Effects on Shrub, Bunchgrass and Biocrust Communities in the Great Basin (USA)

The Willamette Valley (Oregon) Prairie Plant Trait Dataset

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