Index Catalog // ScholarsArchive@OSU

Mitigating cyanobacterial harmful algae blooms : the role of plant humics

Creator:: Theis, Susan A. F.
Abstract:: Cyanobacterial harmful algae blooms (cyanoHABs) are a growing concern worldwide due to damage of ecosystems and threats to human health. Previous research indicates that plant humics from aquatic and wetland vascular plants are effective inhibitors of cyanobacterial metabolism and growth and may be useful as control agents for mitigating cyanoHABs....
Resource Type:: Masters Thesis
Full Text:: : ____________________________________________ Allen J Milligan Abstract: Cyanobacterial harmful algae blooms (cyanoHABs) are a

Serpentine and non-serpentine edaphic ecology and the recovery of Lomatium cookii (Apiaceae), an endangered endemic of southwest Oregon

Creator:: Silvernail, Ian S.
Abstract:: The role of unusual geologies in plant distribution and form is well-known. Serpentine (ultramafic) soils exert a particularly strong influence on plants, as evidenced by a high level of endemism and the morphological and physiological traits displayed in adaptation to the extraordinary chemistry of these substrates. Adaptation may lead to...
Resource Type:: Masters Thesis
Full Text:: : ______________________________________________________________________ Robert J. Meinke The role of unusual geologies in plant distribution and form is

Finding Our Way through Phenotypes

Creator:: Deans, Andrew R., Lewis, Suzanna E., Huala, Eva, Anzaldo, Salvatore S., Ashburner, Michael, Balhoff, James P., Blackburn, David C., Blake, Judith A., Burleigh, J. Gordon, Chanet, Bruno, Cooper, Lauren D., Courtot, Mélanie, Csösz, Sándor, Cul, Hong, Dahdul, Wasila, Das, Sandip, Dececchi, T. Alexander, Dettal, Agnes, Diogo, Rui, Druzinsky, Robert E., Dumontier, Michel, Franz, Nico M., Friedrich, Frank, Gkoutos, George V., Haendel, Melissa, Harmon, Luke J., Hayamizu, Terry F., He, Yongqun, Hines, Heather M., Ibrahim, Nizar, Jackson, Laura M., Jaiswal, Pankaj, James-Zorn, Christina, Köhler, Sebastian, Lecointre, Guillaume, Lapp, Hilmar, Lawrence, Carolyn J., Le Novère, Nicolas, Lundberg, John G., Macklin, James, Mast, Austin R., Midford, Peter E., Mikó, István, Mungall, Christopher J., Oellrich, Anika, Osumi-Sutherland, David, Parkinson, Helen, Ramírez, Martín J., Richter, Stefan, Robinson, Peter N., Ruttenberg, Alan, Schulz, Katja S., Segerdell, Erik, Seltmann, Katja C., Sharkey, Michael J., Smith, Aaron D., Smith, Barry, Specht, Chelsea D., Squires, R. Burke, Thacker, Robert W., Thessen, Anne, Fernandez-Triana, Jose, Vihinen, Mauno, Vize, Peter D., Vogt, Lars, Wall, Christine E., Walls, Ramona L., Westerfeld, Monte, Wharton, Robert A., Wirkner, Christian S., Woolley, James B., Yoder, Matthew J., Zorn, Aaron M., and Mabee, Paula
Abstract:: Despite a large and multifaceted effort to understand the vast landscape of phenotypic data, their current form inhibits productive data analysis. The lack of a community-wide, consensus-based, human- and machine-interpretable language for describing phenotypes and their genomic and environmental contexts is perhaps the most pressing scientific bottleneck to integration across...
Resource Type:: Article
Full Text:: , Melissa Haendel23, Luke J. Harmon24, Terry F. Hayamizu25, Yongqun He26, Heather M. Hines1, Nizar

An overview of the BioCreative 2012 Workshop Track III: interactive text mining task

Creator:: Arighi, Cecilia N., Carterette, Ben, Cohen, K. Bretonnel, Krallinger, Martin, Wilbur, W. John, Fey, Petra, Dodson, Robert, Cooper, Laurel, Van Slyke, Ceri E., Dahdul, Wasila, Mabee, Paula, Li, Donghui, Harris, Bethany, Gillespie, Marc, Jimenez, Silvia, Roberts, Phoebe, Matthews, Lisa, Becker, Kevin, Drabkin, Harold, Bello, Susan, Licata, Luana, Chatr-aryamontri, Andrew, Schaeffer, Mary L., Park, Julie, Haendel, Melissa, Van Auken, Kimberly, Li, Yuling, Chan, Juancarlos, Muller, Hans-Michael, Cui, Hong, Balhoff, James P., Wu, Johnny Chi-Yang, Lu, Zhiyong, Wei, Chih-Hsuan, Tudor, Catalina O., Raja, Kalpana, Subramani, Suresh, Natarajan, Jeyakumar, Cejuela, Juan Miguel, Dubey, Pratibha, and Wu, Cathy
Abstract:: In many databases, biocuration primarily involves literature curation, which usually involves retrieving relevant articles, extracting information that will translate into annotations and identifying new incoming literature. As the volume of biological literature increases, the use of text mining to assist in biocuration becomes increasingly relevant. A number of groups have...
Resource Type:: Article
Full Text:: Licata17, Andrew Chatr-aryamontri18, Mary L. Schaeffer19, Julie Park20, Melissa Haendel21, Kimberly Van

2006 Integrated pest management resource guide

Creator:: Jepson, Paul C., Brewer, Linda J., Jepson, Susan B., and Oregon State University. Extension Service
Abstract:: This publication is offered as a reference to Integrated Pest Management (IPM) resources available to Oregon growers. It highlights university, federal, state, and private services and resources that provide support to growers in the implementation of IPM programs. The Guide consists of five sections: • An introduction to the National...
Resource Type:: Technical Report
Full Text:: Other publications 37 Authors Paul C. Jepson, director, Integrated Plant Protection Center Linda J

Distribution of Potato virus Y Strains in Tubers during the Post-Harvest Period

Creator:: Whitworth, Jonathan L., Hamm, Philip B., and Nolte, Phillip
Abstract:: Russet Burbank, Russet Norkotah, and Shepody tubers infected with Potato virus Y strains (PVYO, PVYN:O, PVYNTN) were tested from storage at 4A degrees C at the initiation of sprouting and then the same tubers were tested again from storage at 4A degrees C seventy eight days later. Samples were taken...
Resource Type:: Article
Full Text:: detection J. L. Whitworth (*) U.S. Department of Agriculture, Agricultural Research Service (USDA-ARS

Distribution and characterization of ice nucleation active strains of Pseudomonas syringae from diseased woody plants and grasses

Creator:: Baca, Steve
Abstract:: In a recent survey, it was observed that many woody plant species grown in Pacific Northwest nurseries exhibited disease symptoms typical of a bacterial infection and Pseudomonas syringae was commonly isolated from these tissues. The distribution of the ice nucleation phenotype among P. syringae strains recovered from these infected woody...
Resource Type:: Masters Thesis
Full Text:: . I would also like to thank Drs. H. Ron Cameron and Peter J. Bottomley for editing my thesis and Dr

Seasonality as a driving factor of decomposition pathways in both meadows and forests : an exploration across a gradient of climate in Oregon

Creator:: Colby, Samantha E.
Abstract:: Soil food webs process the majority of terrestrial carbon, and influence overall ecosystem function. A primary distinction among soil food webs is based on fungal versus bacterial pathways of decomposition; these lead to fundamentally different soil function, and are expected to differ in dominance between meadows and forests. This assumption...
Resource Type:: Masters Thesis
Full Text:: . 5 Literature Cited Andre ́ Lagerlof, J., n, O., Lindberg, T., Bostrom, U., Clarholm, M., Hansson

Chloroplast DNA characters, phylogeny, and classification of Lathyrus (Fabaceae)

Creator:: Asmussen, Conny B. and Liston, Aaron
Abstract:: Mapped cpDNA restriction site characters were analyzed cladistically and the resulting phylogenetic hypotheses were used to test monophyly and relationships of the infrageneric classification of Lathyrus (Fabaceae) proposed by Kupicha (1983, Notes from the Royal Botanic Garden Edinburgh 41: 209–244). The validity of previously proposed classification systems and questions presented...
Resource Type:: Article
Full Text:: , and Melissa Luckow for helpful comments on the manuscript and John Wheeler for help in the field and

Cytokinin production by Agrobacterium tumefaciens

Creator:: Kaiss-Chapman, Richard Wilkinson
Abstract:: Certain plant-associated prokaryotes such as Corynebacteriurn fascians and Agrobacterium tumefaciens are known to produce substantial levels of cytokinins. In view of the fragmentary and presumptive evidence available on the quantitative and qualitative levels of cytokinins produced by A. tumefaciens, it was decided to conduct a study of the cytokinins produced...
Resource Type:: Dissertation
Full Text:: . DEDICATION To my children: Aaron Dylan Chapman Melissa Dyan Chapman 'See what everyone has seen, but

ScholarsArchive@OSU

Mitigating cyanobacterial harmful algae blooms : the role of plant humics

Serpentine and non-serpentine edaphic ecology and the recovery of Lomatium cookii (Apiaceae), an endangered endemic of southwest Oregon

Finding Our Way through Phenotypes

An overview of the BioCreative 2012 Workshop Track III: interactive text mining task

2006 Integrated pest management resource guide

Distribution of Potato virus Y Strains in Tubers during the Post-Harvest Period

Distribution and characterization of ice nucleation active strains of Pseudomonas syringae from diseased woody plants and grasses

Seasonality as a driving factor of decomposition pathways in both meadows and forests : an exploration across a gradient of climate in Oregon

Chloroplast DNA characters, phylogeny, and classification of Lathyrus (Fabaceae)

Cytokinin production by Agrobacterium tumefaciens

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