Index Catalog // ScholarsArchive@OSU

Genome resequencing reveals multiscale geographic structure and extensive linkage disequilibrium in the forest tree Populus trichocarpa

Creator:: Slavov, Gancho T., DiFazio, Stephen P., Martin, Joel, Schackwitz, Wendy, Muchero, Wellington, Rodgers-Melnick, Eli, Lipphardt, Mindie F., Pennacchio, Christa P., Hellsten, Uffe, Pennacchio, Len A., Gunter, Lee E., Ranjan, Priya, Vining, Kelly, Pomraning, Kyle R., Wilhelm, Larry J., Pellegrini, Matteo, Mockler, Todd C., Freitag, Michael, Geraldes, Armando, El-Kassaby, Yousry A., Mansfield, Shawn D., Cronk, Quentin C. B., Douglas, Carl J., Strauss, Steven H., Rokhsar, Dan, and Tuskan, Gerald A.
Abstract:: •Plant population genomics informs evolutionary biology, breeding, conservation and bioenergy feedstock development. For example, the detection of reliable phenotype–genotype associations and molecular signatures of selection requires a detailed knowledge about genome-wide patterns of allele frequency variation, linkage disequilibrium and recombination. •We resequenced 16 genomes of the model tree Populus trichocarpa...
Resource Type:: Article
Full Text:: Rodgers-Melnick1, Mindie F. Lipphardt1, Christa P. Pennacchio3, Uffe Hellsten3, Len A. Pennacchio3, Lee E

Short-term response of Dicamptodon tenebrosus larvae to timber management in southwestern Oregon

Creator:: Leuthold, Niels, Adams, Michael J., and Hayes, John P.
Abstract:: In the Pacific Northwest, previous studies have found a negative effect of timber management on the abundance of stream amphibians, but results have been variable and region specific. These studies have generally used survey methods that did not account for differences in capture probability and focused on stands that were...
Resource Type:: Article
Full Text:: JOHN P. HAYES, Department of Wildlife Ecology and Conservation, University of Florida, Gainesville, FL

Evaluating theories of drought-induced vegetation mortality using a multimodel– experiment framework

Creator:: McDowell, Nate G., Gehres, Nathan, Limousin, Jean Marc, Macalady, Alison, Martínez-Vilalta, Jordi, Mencuccini, Maurizio, Plaut, Jennifer A., Ogée, Jérôme, Robert E., Pangle, Rasse, Daniel P., Ryan, Michael G., Fisher, Rosie A., Sevanto, Sanna, Waring, Richard H., Williams, A. Park, Yepez, Enrico A., Pockman, William T., Xu, Chonggang, Domec, Jean-Christophe, Holtta, Teemu, Mackay, D. Scott, Sperry, John S., Boutz, Amanda, and Dickman, Lee
Abstract:: Model–data comparisons of plant physiological processes provide an understanding of mechanisms underlying vegetation responses to climate. We simulated the physiology of a pi~non pine–juniper woodland (Pinus edulis–Juniperus monosperma) that experienced mortality during a 5 yr precipitation-reduction experiment, allowing a framework with which to examine our knowledge of drought-induced tree mortality....
Resource Type:: Article
Full Text:: H€oltt€a5, D. Scott Mackay6, John S. Sperry7, Amanda Boutz8, Lee Dickman1, Nathan Gehres8, Jean

Do network relationships matter? Comparing network and instream habitat variables to explain densities of juvenile coho salmon (Oncorhynchus kisutch) in mid-coastal Oregon, USA

Creator:: Flitcroft, Rebecca L., Burnett, Kelly M., Reeves, Gordon H., and Ganio, Lisa M.
Abstract:: 1. Aquatic ecologists are working to develop theory and techniques for analysis of dynamic stream processes and communities of organisms. Such work is critical for the development of conservation plans that are relevant at the scale of entire ecosystems. The stream network is the foundation upon which stream systems are...
Resource Type:: Article
Full Text:: : rflitcroft@fs.fed.us Published in 2012 by John Wiley and Sons, Ltd. DO NETWORK RELATIONSHIPS MATTER

Response of young Douglas-fir to 16 years of intensive thinning

Creator:: Tappeiner, J. C. (John C.), Bell, John F., Brodie, J. Douglas (John Douglas), 1938-, and Oregon State University. Forest Research Laboratory
Abstract:: A 20-year-old Douglas-fir [Pseudotsuga menziesii (Mirb.) Franco] stand in the Oregon Coast Range was thinned from about 1,700 to about 350 trees/ac. Subsequent thinnings, under eight different regimes, occurred at ages 23, 27, 30, and 32. Average net periodic cubic-volume growth was strongly influenced by thinning regime, varying from about...
Resource Type:: Technical Report
Full Text:: . Tappeiner, John C., John F. Bell, and J. Douglas Brodie. RESPONSE OF YOUNG DOUGLAS-FIR TO 16 YEARS OF

An evaluation of eight intertree competition indices

Creator:: Noone, Charles S., Bell, John F., and Oregon State University. Forest Research Laboratory
Resource Type:: Technical Report
Full Text:: EVALUATION OF EIGHT INTERTREE COMPETITION INDICES S. NOONE JOHN F. BELL INTRODUCTION Intertree competition

Volatile oil from western juniper

Creator:: Kurth, E. F. (Ervin Frank), Ross, John Daryl, and Oregon Forest Products Laboratory
Resource Type:: Technical Report
Full Text:: III Volatile Oil from Western Juniper By E. F. Kurth J. D

Assessing the Carbon Consequences of Western Juniper (Juniperus occidentalis) Encroachment Across Oregon, USA

Creator:: Campbell, John L., Kennedy, Robert E., Cohen, Warren B., and Miller, Richard F.
Abstract:: Our ability to assess the continental impacts of woody encroachment remains compromised by the paucity of studies quantifying regional encroachment rates. This knowledge gap is especially apparent when it comes to quantifying the impact of woody encroachment on large-scale carbon dynamics. In this study, we use a combination of aerial...
Resource Type:: Article
Full Text:: occidentalis) Encroachment Across Oregon, USA John L. Campbell,1 Robert E. Kennedy,2 Warren B. Cohen,3 and

Application of the variable plot method of sampling forest stands

Creator:: Bell, John F., Alexander, Lucien B., and Oregon State Board of Forestry
Resource Type:: Technical Report
Full Text:: rinble size ?lot method of Measuring forest stands. It is fortunate that senior author john F. Bell had

Generalized crack closure analysis for elements with arbitrarily-placed side nodes and consistent nodal forces

Creator:: Nairn, John A.
Abstract:: A new approach was developed for the evaluation of energy release rate by the virtual crack closure technique in quadratic and linear elements. The generalized method allows arbitrary placement of the side nodes for quadratic elements and thus includes both standard elements, with mid-side nodes, and singularity elements, with quarter-point...
Resource Type:: Article
Full Text:: Arbitrarily-Placed Side Nodes and Consistent Nodal Forces John A. Nairn Received: 30 March 2011 / Accepted

ScholarsArchive@OSU

Genome resequencing reveals multiscale geographic structure and extensive linkage disequilibrium in the forest tree Populus trichocarpa

Short-term response of Dicamptodon tenebrosus larvae to timber management in southwestern Oregon

Evaluating theories of drought-induced vegetation mortality using a multimodel– experiment framework

Do network relationships matter? Comparing network and instream habitat variables to explain densities of juvenile coho salmon (Oncorhynchus kisutch) in mid-coastal Oregon, USA

Response of young Douglas-fir to 16 years of intensive thinning

An evaluation of eight intertree competition indices

Volatile oil from western juniper

Assessing the Carbon Consequences of Western Juniper (Juniperus occidentalis) Encroachment Across Oregon, USA

Application of the variable plot method of sampling forest stands

Generalized crack closure analysis for elements with arbitrarily-placed side nodes and consistent nodal forces

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