Noimative invasive species pose a growing threat to living aquatic resources in the United States. Shipping particularly use of ballast water represents a major pathway of introduction for these species and in 1996, Congress established a program of baseline surveys to measure the effectiveness of ballast water management. This report...
In the equatorial Pacific Ocean, earthquakes are used as an indicator of tectonic stress for normal faults in the Galapagos Spreading Center, transform faults along the East Pacific Rise and thrust faults in the Middle American subduction zone. Linkages between seafloor tectonic processes and oceanographic and lunar conditions were explored...
We present a study of the ocean circulation using state of the art numerical and data assimilation techniques. The second chapter of the thesis presents the development and application of generalized inversion to a simple dynamical model of Lake Kinneret. The intent was to develop the necessary tools to implement...
A satellite-derived Climatology of Global Ocean Winds (COGOW) on a 0.5° latitude by 0.5° latitude grid is presented based on 5-years (August 1999 July 2004) of measurements from the SeaWinds scatterometer that was launched on 19 June 1999 onboard the QuikSCAT satellite. SeaWinds is an active microwave radar that estimates...
Nares Strait is one of three main passages of the Canadian Archipelago that
channels freshwater from the Arctic Ocean to the North Atlantic. There are very few
observations regarding the role of this region on the present day Arctic freshwater budget,
and even less regarding the changes in freshwater fluxes...
An autonomous, in-situ instrument was developed to detect dissolved copper in seawater, suitable for deployment on time scales from weeks to months. A commercially available in-situ nitrate analyzer (YSI 9600) was adapted to measure copper (II) in seawater by chemiluminescence. Modifications included construction of a photomultiplier (PMT) based detector and...
The biological transformation of dinitrogen gas (N2) into combined forms(termed N2 fixation) by certain genera of oceanic cyanobacteria represents the largest incoming flux of nitrogen to the global ocean. As such, biological nitrogen fixation
plays a significant role in the regulation of oceanic productivity and the export of
carbon and...
This thesis examines the mechanisms that couple the monthly-averaged
atmospheric boundary layer (ABL) to open-ocean sea surface temperature (SST)
perturbations on scales of 50-500 km. The observed positive correlation between
surface wind speed anomalies and SST anomalies is successfully simulated using
the Weather Research and Forecasting (WRF) model.
In numerical...
The mathematical and physical connections between three different ways of quantifying linear predictability in geophysical fluid systems are studied in a series of analytical and numerical models. Normal modes, as they are traditionally formulated in the instabilities theories of geophysical fluid dynamics, characterize the asymptotic development of disturbances to stationary...
Plate boundaries are commonly regions of complex, diffuse deformation with
the motion across the boundary accommodated by numerous structural systems, rather
than being narrow, discrete zones of deformation. One such boundary occurs where
the North American plate makes contact with Juan de Fuca, Gorda, and Pacific plates
along the west...
Our view of phytoplankton has historically revolved around their inability to
control their location in space. The term phytoplankton itself underscores this
particular difference between phytoplankton and their sessile terrestrial counterparts.
Yet there are other differences between land plants and the phytoplankton that are
perhaps equally important, beyond this sessile-planktonic...
Experiments were designed to answer key questions about diatom-derived organic matter cycling (i.e., production and degradation) in coastal systems. Dissolved organic matter (DOM) production was examined in axenic batch cultures of five diatom species. Dissolved organic carbon (DOC) release rates varied between species, but were significantly higher for all species...
Multibeam sonar data was collected on Nehalem Bank, off of the Oregon Coast with the purpose of increasing the spatial resolution of our knowledge of the area and delineating seafloor habitats. The system used was the Kongsberg Simrad EM-300 operating at 30 kHz. The data set collected includes both topographic...
Modern upwelling conditions and corresponding oceanographic properties are investigated and reconstructed for the Late Quaternary. The oceanographic conditions considered influence diatom ecology and the record of fossil diatom frustules in the sediments.
Diatoms from modern sediments are evaluated as paleoceanographic proxies and transfer functions (TFs) are calibrated using the Imbrie...
Tropical instability waves (TIWs) are prominent seasonal features in both the equatorial Pacific and Atlantic Oceans. This work quantifies their role in modulating the distributions of nutrients and phytoplankton biomass. Using an eight year record of biannual ship observations along the Tropical Atmosphere Ocean (TAO) buoy array, cruise sections crossing...
Large barite (BaSO4) structures mark cold seeps in the southern San Clemente Basin. Barium flux to San Clemente sediments is two to three times greater than fluxes measured in surrounding California Borderland basins. Analyses of sediment trap material, water column samples, sediments and pore water indicate that expected bariumbearing mineral...
The North Pacific subtropical gyre (NPSG), once considered to be a biological desert due to low primary production (PP) and its associated variability, has been found more productive and variable than previously thought. The environmental conditions controlling this relatively high PP variability are yet to be elucidated, despite important implications...
The microbial loop plays a crucial role in remineralization of organic matter and fuels recycled production in the aquatic environment. The capability of microbes to utilize particular compounds can be examined through their ectoenzyme (found outside the cell) activities using fluorogenic substrate analogs. These catalysts hydrolyze polymers otherwise too large...
Remote areas are frequently homes to regional subpopulations of endangered green sea turtles (Chelonia mydas) and their essential habitat. Local communities are often the users and primary stewards of this valuable and charismatic resource. Recognizing this, a Hatohobeian community group in Palau has engaged in longterm monitoring and conservation management...
The effects of alongshore variability in topography (banks and capes) and spatial variability in the wind forcing, including the wind-stress curl, on coastal ocean circulation are studied using a combination of observations and model simulations. Satellite sea surface temperature observations are used to describe the seasonal evolution of temperature fronts...
The longshore variability of the coastal response to hurricanes may be examined within the framework of a storm-impact scaling model that compares spatially-variable beach morphology and fluid forcing. The relative elevations of dune height and storm-induced water levels are used to define three impact regimes (swash, collision, and overwash), within...
Thermohaline interleaving is an important mechanism for laterally fluxing salt, heat, and nutrients between oceanic water masses. Interleaving is driven by a release of potential energy resulting from the vastly differing diffusivities of heat and salt in seawater. The flows are composed of stacked intrusions that flux more buoyant and...
Structure-forming invertebrates belong to a polyphyletic group of primarily sessile and sedentary megafauna that can significantly enhance the complexity of physical habitats. A number of these organisms, including cold-water corals and sponges, are known to be slow growing and vulnerable to physical disturbance. In addition, as filter feeders, these invertebrates...
To date, the use of oceanographic data in fisheries management has been limited by the scarcity and the difficulty of accessing complete oceanographic datasets. Consequently, fish stocks are managed with limited knowledge about the habitat where fish live and incomplete understanding of what oceanographic conditions affect their populations. With the...
