Index Catalog // ScholarsArchive@OSU

Data Experimental evaluation of genomic DNA degradation rates for the pathogen Pseudogymnoascus destructans (Pd) in bat guano

Creator:: Urbina, Jenny
Abstract:: This dataset is based on quantitative PCR (qPCR) output. Output from all qPCR was compiled in this dataset and kept as the original. Information about sampling time, id, concentration, sites and a conversion of the quantity in femtograms were added as complement to the qPCR output to facilitate data analysis
Resource Type:: Dataset

Dataset used for “The early life stages of California yellowtail (Seriola dorsalis) and white seabass (Atractoscion nobilis) respond to food particle taste more than smell.”

Creator:: Hawkyard, Matt, Langdon, Chris, Stuart, Kevin, and Drawbridge, Mark
Abstract:: This dataset was produced as a result of experiments conducted with simple and alginate complex particles that were used to evaluate feeding in California yellowtail and white seabass post larvae. Retention data was collected from a series of retention trials whereby particles were suspended in seawater for various lengths of...
Resource Type:: Dataset

Supplemental data to "Casting a broader net: Using microfluidic metagenomics to capture aquatic biodiversity data from diverse taxonomic targets"

Creator:: Hauck, Laura L., Weitemier, Kevin A., Penaluna, Brooke E., Garcia, Tiffany, and Cronn, Richard
Abstract:: This dataset contains the taxonomic classifications of environmental DNA (eDNA) sequences obtained from Fall Creek, Oregon, via microfluidic multiplex PCR (Fluidigm Access Array) and high-throughput sequencing. It is accompanied by electrofishing counts taken at the same time as the eDNA samples. Metadata and R scripts are provided to analyze the...
Resource Type:: Dataset

Comparing anuran performance and movement

Creator:: Bredeweg, Evan M.
Abstract:: Movement in an important component of an animal’s life cycle when it relies on both aquatic and terrestrial habitats. When multiple species overlap in the use of these habitats, they rely on other methods to reduce competition for shared resources. This dataset measured the jumping performance and movement behavior of...
Resource Type:: Dataset

Dateset for : Ampelisca eschrichtii Krøyer, 1842 (Ampeliscidae) of the Sakhalin Shelf in the Okhotsk Sea starve in summer and feast in winter

Creator:: Durkina, Valentina B., Chapman, John W., and Demchenko, Natalia L.
Abstract:: Background. Ampelisca eschrichtii Krøyer, 1842 of the Sakhalin Shelf of the Okhotsk Sea, Far Eastern Russia, comprise the highest known biomass concentration of any amphipod population in the world and are a critically important prey source for western gray whales. Growth and reproduction in this population has not been apparent...
Resource Type:: Dataset

Re-Occupancy of Breeding Territories by Ferruginous Hawks in Wyoming: Relationships to Environmental and Anthropogenic Factors

Creator:: Wallace, Zachary P., Kennedy, Patricia L., Squires, John R., Oakleaf, Robert J., Olson, Lucretia E., and Dugger, Katie M.
Abstract:: Grassland and shrubland birds are declining globally due in part to anthropogenic habitat modification. Because population performance of these species is also influenced by non-anthropogenic factors, it is important to incorporate all relevant ecological drivers into demographic models. We used design-based sampling and occupancy models to test relationships of environmental...
Resource Type:: Article

Evaluating Multi-Level Models to Test Occupancy State Responses of Plethodontid Salamanders

Creator:: Kroll, Andrew J., Garcia, Tiffany S., Jones, Jay E., Dugger, Katie, Murden, Blake, Johnson, Josh, Peterman, Summer, Brintz, Ben, and Rochelle, Michael
Abstract:: Correction 23 Dec 2015: The PLOS ONE Staff (2015) Correction: Evaluating Multi-Level Models to Test Occupancy State Responses of Plethodontid Salamanders. PLOS ONE 10(12): e0145899. https://doi.org/10.1371/journal.pone.0145899
Resource Type:: Article

A Meta-Analysis of Lesser Prairie-Chicken Nesting and Brood-Rearing Habitats: Implications for Habitat Management

Creator:: Hagen, Christian A., Grisham, Blacke A., Boal, Clint W., and Haukos, David A.
Abstract:: The distribution and range of lesser prairie-chicken (Tympanuchus pallidicinctus) has been reduced by >90% since European settlement of the Great Plains of North America. Currently, lesser prairie-chickens occupy 3 general vegetation communities: sand sagebrush (Artemisia filifolia), sand shinnery oak (Quercus havardii), and mixed-grass prairies juxtaposed with Conservation Reserve Program grasslands....
Resource Type:: Article

Local Variability Mediates Vulnerability of Trout Populations to Land Use and Climate Change

Creator:: Penaluna, Brooke E., Dunham, Jason B., Railsback, Steve F., Arismendi, Ivan, Johnson, Sherri L., Bilby, Robert E., Safeeq, Mohammad, and Skaugset, Arne E.
Abstract:: Land use and climate change occur simultaneously around the globe. Fully understanding their separate and combined effects requires a mechanistic understanding at the local scale where their effects are ultimately realized. Here we applied an individual-based model of fish population dynamics to evaluate the role of local stream variability in...
Resource Type:: Article

Causes and Consequences of Timing Errors Associated With Global Positioning System Collar Accelerometer Activity Monitors

Creator:: Gaylord, Adam J. and Sanchez, Dana M.
Abstract:: Direct behavioral observations of multiple free-ranging animals over long periods of time and large geographic areas is prohibitively difficult. However, recent improvements in technology, such as Global Positioning System (GPS) collars equipped with motion-sensitive activity monitors, create the potential to remotely monitor animal behavior. Accelerometer-equipped activity monitors quantify animal motion...
Resource Type:: Article

A new species of western Atlantic lizardfish (Teleostei: Synodontidae: Synodus) and resurrection of Synodus bondi Fowler, 1939, as a valid species from the Caribbean with redescriptions of S. bondi, S. foetens (Linnaeus, 1766), and S. intermedius (Agassiz, 1829)

Creator:: Frable, Benjamin W., Baldwin, Carole C., Luther, Brendan M., and Weigt, Lee A.
Abstract:: Western Atlantic synodontid species were studied as part of an ongoing effort to reanalyze Caribbean shorefish diversity. A neighbor-joining tree constructed from cytochrome c oxidase I (COI) data revealed 2 highly divergent genetic lineages within both Synodus intermedius (Agassiz, 1829) (Sand Diver) and S. foetens (Linnaeus, 1766) (Inshore Lizardfish). A...
Resource Type:: Article

Climate Change Winners: Receding Ice Fields Facilitate Colony Expansion and Altered Dynamics in an Adélie Penguin Metapopulation

Creator:: LaRue, Michelle A., Ainley, David G., Swanson, Matt, Dugger, Katie M., Lyver, Phil O'B., Barton, Kerry, and Ballard, Grant
Abstract:: There will be winners and losers as climate change alters the habitats of polar organisms. For an Adelie penguin (Pygoscelis adeliae) colony on Beaufort Island (Beaufort), part of a cluster of colonies in the southern Ross Sea, we report a recent population increase in response to increased nesting habitat as...
Resource Type:: Article

Post-Breeding Season Migrations of a Top Predator, the Harbor Seal (Phoca vitulina richardii), from a Marine Protected Area in Alaska

Creator:: Womble, Jamie N. and Gende, Scott M.
Abstract:: Marine protected areas (MPAs) are increasingly being used as a conservation tool for highly mobile marine vertebrates and the focus is typically on protecting breeding areas where individuals are aggregated seasonally. Yet movements during the non-breeding season can overlap with threats that may be equally as important to population dynamics....
Resource Type:: Article

Host Identity Matters in the Amphibian-Batrachochytrium dendrobatidis System: Fine-Scale Patterns of Variation in Responses to a Multi-Host Pathogen

Creator:: Gervasi, Stephanie, Gondhalekar, Carmen, Olson, Deanna H., and Blaustein, Andrew R.
Abstract:: Species composition within ecological assemblages can drive disease dynamics including pathogen invasion, spread, and persistence. In multi-host pathogen systems, interspecific variation in responses to infection creates important context dependency when predicting the outcome of disease. Here, we examine the responses of three sympatric host species to a single fungal pathogen,...
Resource Type:: Article

Prey Patch Patterns Predict Habitat Use by Top Marine Predators with Diverse Foraging Strategies

Creator:: Benoit-Bird, Kelly J., Battaile, Brian C., Heppell, Scott A., Hoover, Brian, Irons, David, Jones, Nathan, Kuletz, Kathy J., Nordstrom, Chad A., Paredes, Rosana, Suryan, Robert M., Waluk, Chad M., and Trites, Andrew W.
Abstract:: Spatial coherence between predators and prey has rarely been observed in pelagic marine ecosystems. We used measures of the environment, prey abundance, prey quality, and prey distribution to explain the observed distributions of three co-occurring predator species breeding on islands in the southeastern Bering Sea: black-legged kittiwakes (Rissa tridactyla), thick-billed...
Resource Type:: Article

Prey preference of lingcod (Ophiodon elongatus), a top marine predator : implications for ecosystem-based fisheries management

Creator:: Tinus, Craig A.
Abstract:: Many highly exploited ecosystems are managed on the basis of single-species demographic information. This management approach can exacerbate tensions among stakeholders with competing interests who in turn rely on data with notoriously high variance. In this case study, an application of diet and dive survey data was used to describe...
Resource Type:: Article

Estimating Global ‘‘Blue Carbon’’ Emissions from Conversion and Degradation of Vegetated Coastal Ecosystems

Creator:: Pendleton, Linwood, Donato, Daniel C., Murray, Brian C., Crooks, Stephen, Jenkins, W. Aaron, Sifleet, Samantha, Craft, Christopher, Fourqurean, James W., Kauffman, J. Boone, Marba, Nuria, Megonigal, Patrick, Pidgeon, Emily, Herr, Dorothee, Gordon, David, and Baldera, Alexis
Abstract:: Recent attention has focused on the high rates of annual carbon sequestration in vegetated coastal ecosystems—marshes, mangroves, and seagrasses—that may be lost with habitat destruction (‘conversion’). Relatively unappreciated, however, is that conversion of these coastal ecosystems also impacts very large pools of previously-sequestered carbon. Residing mostly in sediments, this ‘blue...
Resource Type:: Article

ScholarsArchive@OSU

Data Experimental evaluation of genomic DNA degradation rates for the pathogen Pseudogymnoascus destructans (Pd) in bat guano

Dataset used for “The early life stages of California yellowtail (Seriola dorsalis) and white seabass (Atractoscion nobilis) respond to food particle taste more than smell.”

Supplemental data to "Casting a broader net: Using microfluidic metagenomics to capture aquatic biodiversity data from diverse taxonomic targets"

Comparing anuran performance and movement

Dateset for : Ampelisca eschrichtii Krøyer, 1842 (Ampeliscidae) of the Sakhalin Shelf in the Okhotsk Sea starve in summer and feast in winter

Re-Occupancy of Breeding Territories by Ferruginous Hawks in Wyoming: Relationships to Environmental and Anthropogenic Factors

Evaluating Multi-Level Models to Test Occupancy State Responses of Plethodontid Salamanders

A Meta-Analysis of Lesser Prairie-Chicken Nesting and Brood-Rearing Habitats: Implications for Habitat Management

Local Variability Mediates Vulnerability of Trout Populations to Land Use and Climate Change

Causes and Consequences of Timing Errors Associated With Global Positioning System Collar Accelerometer Activity Monitors

A new species of western Atlantic lizardfish (Teleostei: Synodontidae: Synodus) and resurrection of Synodus bondi Fowler, 1939, as a valid species from the Caribbean with redescriptions of S. bondi, S. foetens (Linnaeus, 1766), and S. intermedius (Agassiz, 1829)

Climate Change Winners: Receding Ice Fields Facilitate Colony Expansion and Altered Dynamics in an Adélie Penguin Metapopulation

Post-Breeding Season Migrations of a Top Predator, the Harbor Seal (Phoca vitulina richardii), from a Marine Protected Area in Alaska

Host Identity Matters in the Amphibian-Batrachochytrium dendrobatidis System: Fine-Scale Patterns of Variation in Responses to a Multi-Host Pathogen

Prey Patch Patterns Predict Habitat Use by Top Marine Predators with Diverse Foraging Strategies

Prey preference of lingcod (Ophiodon elongatus), a top marine predator : implications for ecosystem-based fisheries management

Estimating Global ‘‘Blue Carbon’’ Emissions from Conversion and Degradation of Vegetated Coastal Ecosystems

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